RNA–Protein interactions for RNA: ENST00000470799.5

COL16A1-209, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-209ENST00000470799 IBTKQ9P2D0 1353 aaPredicted RBP20.64■□□□□ 0.89
COL16A1-209ENST00000470799 TOMM70O94826 608 aa20.64■□□□□ 0.89
COL16A1-209ENST00000470799 TCIRG1Q13488 830 aa20.64■□□□□ 0.89
COL16A1-209ENST00000470799 DPY19L2Q6NUT2 758 aa20.64■□□□□ 0.89
COL16A1-209ENST00000470799 NLRP3Q96P20 1036 aa20.64■□□□□ 0.89
COL16A1-209ENST00000470799 ANKRD13DQ6ZTN6 518 aa20.63■□□□□ 0.89
COL16A1-209ENST00000470799 RTKN2Q8IZC4 609 aa20.63■□□□□ 0.89
COL16A1-209ENST00000470799 PLBD2Q8NHP8 589 aa20.63■□□□□ 0.89
COL16A1-209ENST00000470799 ZNF428Q96B54 188 aa20.63■□□□□ 0.89
COL16A1-209ENST00000470799 RBM17Q96I25 401 aaKnown RBP20.63■□□□□ 0.89
COL16A1-209ENST00000470799 TRMT112Q9UI30 125 aaKnown RBP20.63■□□□□ 0.89
COL16A1-209ENST00000470799 SALL2Q9Y467 1007 aaPredicted RBP20.63■□□□□ 0.89
COL16A1-209ENST00000470799 GLTPD2A6NH11 291 aa20.62■□□□□ 0.89
COL16A1-209ENST00000470799 CRY2Q49AN0 593 aa20.62■□□□□ 0.89
COL16A1-209ENST00000470799 OLFM4Q6UX06 510 aa20.62■□□□□ 0.89
COL16A1-209ENST00000470799 NLRP10Q86W26 655 aa20.62■□□□□ 0.89
COL16A1-209ENST00000470799 C7orf43Q8WVR3 580 aa20.62■□□□□ 0.89
COL16A1-209ENST00000470799 CHMP4AQ9BY43 222 aa20.62■□□□□ 0.89
COL16A1-209ENST00000470799 LTBP3Q9NS15 1303 aa20.61■□□□□ 0.89
COL16A1-209ENST00000470799 TCERG1O14776 1098 aaKnown RBP20.61■□□□□ 0.89
COL16A1-209ENST00000470799 C8orf58Q8NAV2 365 aa20.61■□□□□ 0.89
COL16A1-209ENST00000470799 TMX4Q9H1E5 349 aaPredicted RBP20.61■□□□□ 0.89
COL16A1-209ENST00000470799 NUP98P52948 1817 aa20.61■□□□□ 0.89
COL16A1-209ENST00000470799 SLX4Q8IY92 1834 aa20.6■□□□□ 0.89
COL16A1-209ENST00000470799 FKBP4Q02790 459 aaKnown RBP eCLIP20.6■□□□□ 0.89
COL16A1-209ENST00000470799 GOLGA2Q08379 1002 aa20.6■□□□□ 0.89
COL16A1-209ENST00000470799 RIC3Q7Z5B4 369 aa20.6■□□□□ 0.89
COL16A1-209ENST00000470799 WWC1Q8IX03 1113 aa20.6■□□□□ 0.89
COL16A1-209ENST00000470799 TSR2Q969E8 191 aaKnown RBP20.6■□□□□ 0.89
COL16A1-209ENST00000470799 HCLS1P14317 486 aaPredicted RBP20.59■□□□□ 0.89
COL16A1-209ENST00000470799 HSPA6P17066 643 aa20.59■□□□□ 0.89
COL16A1-209ENST00000470799 CCDC27Q2M243 656 aa20.59■□□□□ 0.89
COL16A1-209ENST00000470799 CCDC30Q5VVM6 783 aa20.59■□□□□ 0.89
COL16A1-209ENST00000470799 ZNF277Q9NRM2 450 aaPredicted RBP20.59■□□□□ 0.89
COL16A1-209ENST00000470799 RNF123Q5XPI4 1314 aa20.58■□□□□ 0.89
COL16A1-209ENST00000470799 ATP5J2-PTCD1G3V325 749 aa20.58■□□□□ 0.89
COL16A1-209ENST00000470799 VEGFAP15692 232 aaPredicted RBP20.58■□□□□ 0.89
COL16A1-209ENST00000470799 HOXA10P31260 410 aaPredicted RBP20.58■□□□□ 0.89
COL16A1-209ENST00000470799 C3orf67Q6ZVT6 689 aa20.58■□□□□ 0.89
COL16A1-209ENST00000470799 CRAMP1Q96RY5 1269 aa20.58■□□□□ 0.89
COL16A1-209ENST00000470799 SH3TC1Q8TE82 1336 aa20.57■□□□□ 0.88
COL16A1-209ENST00000470799 PPEF1O14829 653 aaPredicted RBP20.57■□□□□ 0.88
COL16A1-209ENST00000470799 SBF1O95248 1867 aa20.57■□□□□ 0.88
COL16A1-209ENST00000470799 SLC10A5Q5PT55 438 aa20.57■□□□□ 0.88
COL16A1-209ENST00000470799 SYNE4Q8N205 404 aa20.57■□□□□ 0.88
COL16A1-209ENST00000470799 RBM46Q8TBY0 533 aaKnown RBP20.57■□□□□ 0.88
COL16A1-209ENST00000470799 RIC1Q4ADV7 1423 aa20.56■□□□□ 0.88
COL16A1-209ENST00000470799 CC2D2BQ6DHV5 1058 aa20.56■□□□□ 0.88
COL16A1-209ENST00000470799 PHAXQ9H814 394 aaKnown RBP20.56■□□□□ 0.88
COL16A1-209ENST00000470799 DDX58O95786 925 aaKnown RBP20.55■□□□□ 0.88
COL16A1-209ENST00000470799 NCBP3Q53F19 620 aaKnown RBP20.55■□□□□ 0.88
COL16A1-209ENST00000470799 RTL5Q5HYW3 569 aaPredicted RBP20.55■□□□□ 0.88
COL16A1-209ENST00000470799 TSPYL6Q8N831 410 aa20.55■□□□□ 0.88
COL16A1-209ENST00000470799 STK31Q9BXU1 1019 aa20.55■□□□□ 0.88
COL16A1-209ENST00000470799 TNRC6CQ9HCJ0 1690 aaKnown RBP20.54■□□□□ 0.88
COL16A1-209ENST00000470799 CACNA1SQ13698 1873 aa20.54■□□□□ 0.88
COL16A1-209ENST00000470799 DDX46Q7L014 1031 aaKnown RBP20.54■□□□□ 0.88
COL16A1-209ENST00000470799 FAM89AQ96GI7 184 aa20.54■□□□□ 0.88
COL16A1-209ENST00000470799 DDNO94850 711 aaPredicted RBP20.53■□□□□ 0.88
COL16A1-209ENST00000470799 IARSP41252 1262 aaKnown RBP20.53■□□□□ 0.88
COL16A1-209ENST00000470799 GRIPAP1Q4V328 841 aa20.53■□□□□ 0.88
COL16A1-209ENST00000470799 ISCA1Q9BUE6 129 aa20.53■□□□□ 0.88
COL16A1-209ENST00000470799 IL16Q14005 1332 aa20.53■□□□□ 0.88
COL16A1-209ENST00000470799 FSTL1Q12841 308 aa20.52■□□□□ 0.88
COL16A1-209ENST00000470799 TWISTNBQ3B726 338 aaPredicted RBP20.52■□□□□ 0.88
COL16A1-209ENST00000470799 JDP2Q8WYK2 163 aa20.52■□□□□ 0.88
COL16A1-209ENST00000470799 PSMD1Q99460 953 aa20.52■□□□□ 0.88
COL16A1-209ENST00000470799 MYD88Q99836 296 aa20.52■□□□□ 0.88
COL16A1-209ENST00000470799 FER1L6Q2WGJ9 1857 aa20.52■□□□□ 0.87
COL16A1-209ENST00000470799 SMC1BQ8NDV3 1235 aa20.51■□□□□ 0.87
COL16A1-209ENST00000470799 ABCC4O15439 1325 aa20.51■□□□□ 0.87
COL16A1-209ENST00000470799 ARFGEF2Q9Y6D5 1785 aa20.5■□□□□ 0.87
COL16A1-209ENST00000470799 BBOX1O75936 387 aa20.5■□□□□ 0.87
COL16A1-209ENST00000470799 APLP1P51693 650 aa20.5■□□□□ 0.87
COL16A1-209ENST00000470799 WDR63Q8IWG1 891 aa20.5■□□□□ 0.87
COL16A1-209ENST00000470799 ATP6V0A2Q9Y487 856 aa20.5■□□□□ 0.87
COL16A1-209ENST00000470799 TIAM2Q8IVF5 1701 aa20.5■□□□□ 0.87
COL16A1-209ENST00000470799 TRIM28Q13263 835 aaKnown RBP20.49■□□□□ 0.87
COL16A1-209ENST00000470799 LARGE2Q8N3Y3 721 aa20.49■□□□□ 0.87
COL16A1-209ENST00000470799 CCDC88AQ3V6T2 1871 aa20.49■□□□□ 0.87
COL16A1-209ENST00000470799 IRS4O14654 1257 aaPredicted RBP20.48■□□□□ 0.87
COL16A1-209ENST00000470799 HSP90B1P14625 803 aaKnown RBP20.48■□□□□ 0.87
COL16A1-209ENST00000470799 GRAPQ13588 217 aa20.48■□□□□ 0.87
COL16A1-209ENST00000470799 GRAPLQ8TC17 118 aaPredicted RBP20.48■□□□□ 0.87
COL16A1-209ENST00000470799 MAP3K2Q9Y2U5 619 aa20.48■□□□□ 0.87
COL16A1-209ENST00000470799 SLC4A2P04920 1241 aa20.47■□□□□ 0.87
COL16A1-209ENST00000470799 EIF6P56537 245 aaKnown RBP20.47■□□□□ 0.87
COL16A1-209ENST00000470799 DPP8Q6V1X1 898 aaPredicted RBP20.47■□□□□ 0.87
COL16A1-209ENST00000470799 SLC51AQ86UW1 340 aa20.47■□□□□ 0.87
COL16A1-209ENST00000470799 ZBTB38Q8NAP3 1195 aaPredicted RBP20.47■□□□□ 0.87
COL16A1-209ENST00000470799 METTL22Q9BUU2 404 aaPredicted RBP20.47■□□□□ 0.87
COL16A1-209ENST00000470799 CWC25Q9NXE8 425 aaPredicted RBP20.47■□□□□ 0.87
COL16A1-209ENST00000470799 ZNF541Q9H0D2 1346 aa20.47■□□□□ 0.87
COL16A1-209ENST00000470799 FANCIQ9NVI1 1328 aa20.47■□□□□ 0.87
COL16A1-209ENST00000470799 IQCA1LA6NCM1 817 aa20.46■□□□□ 0.87
COL16A1-209ENST00000470799 PPIP5K2O43314 1243 aa20.46■□□□□ 0.87
COL16A1-209ENST00000470799 NEXNQ0ZGT2 675 aa20.46■□□□□ 0.87
COL16A1-209ENST00000470799 KSR2Q6VAB6 950 aa20.46■□□□□ 0.87
COL16A1-209ENST00000470799 SP8Q8IXZ3 490 aa20.46■□□□□ 0.87
COL16A1-209ENST00000470799 MPNDQ8N594 471 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms