RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 KCNH4Q9UQ05 1017 aa5.42□□□□□ -1.54
UBXN4-206ENST00000470687 COL17A1Q9UMD9 1497 aaPredicted RBP5.41□□□□□ -1.54
UBXN4-206ENST00000470687 PIK3CDO00329 1044 aa5.41□□□□□ -1.54
UBXN4-206ENST00000470687 AFF1P51825 1210 aaKnown RBP5.41□□□□□ -1.54
UBXN4-206ENST00000470687 SRPK2P78362 688 aaKnown RBP5.41□□□□□ -1.54
UBXN4-206ENST00000470687 TBC1D8BQ0IIM8 1120 aa5.41□□□□□ -1.54
UBXN4-206ENST00000470687 EML3Q32P44 896 aa5.41□□□□□ -1.54
UBXN4-206ENST00000470687 DMRTC2Q8IXT2 367 aaPredicted RBP5.41□□□□□ -1.54
UBXN4-206ENST00000470687 PAX4O43316 350 aa5.4□□□□□ -1.54
UBXN4-206ENST00000470687 UBTFP17480 764 aaKnown RBP5.4□□□□□ -1.54
UBXN4-206ENST00000470687 PSME1Q06323 249 aa5.4□□□□□ -1.54
UBXN4-206ENST00000470687 SEMA3FQ13275 785 aa5.4□□□□□ -1.54
UBXN4-206ENST00000470687 C1orf53Q5VUE5 145 aa5.4□□□□□ -1.54
UBXN4-206ENST00000470687 PROSER2Q86WR7 435 aaPredicted RBP5.4□□□□□ -1.54
UBXN4-206ENST00000470687 TNS4Q8IZW8 715 aa5.4□□□□□ -1.54
UBXN4-206ENST00000470687 WFDC12Q8WWY7 111 aa5.4□□□□□ -1.54
UBXN4-206ENST00000470687 ANKIB1Q9P2G1 1089 aa5.4□□□□□ -1.54
UBXN4-206ENST00000470687 NAGPAQ9UK23 515 aa5.4□□□□□ -1.54
UBXN4-206ENST00000470687 ZNF777Q9ULD5 760 aaPredicted RBP5.4□□□□□ -1.54
UBXN4-206ENST00000470687 NOD1Q9Y239 953 aa5.4□□□□□ -1.54
UBXN4-206ENST00000470687 SFI1A8K8P3 1242 aa5.39□□□□□ -1.55
UBXN4-206ENST00000470687 SOX11P35716 441 aa5.39□□□□□ -1.55
UBXN4-206ENST00000470687 ABL2P42684 1182 aa5.39□□□□□ -1.55
UBXN4-206ENST00000470687 IREB2P48200 963 aaKnown RBP5.39□□□□□ -1.55
UBXN4-206ENST00000470687 HIRAP54198 1017 aaPredicted RBP5.39□□□□□ -1.55
UBXN4-206ENST00000470687 WASHC4Q2M389 1173 aa5.39□□□□□ -1.55
UBXN4-206ENST00000470687 PSAPL1Q6NUJ1 521 aa5.39□□□□□ -1.55
UBXN4-206ENST00000470687 POTEAQ6S8J7 498 aa5.39□□□□□ -1.55
UBXN4-206ENST00000470687 ZNF280CQ8ND82 737 aa5.39□□□□□ -1.55
UBXN4-206ENST00000470687 NOS3P29474 1203 aa5.38□□□□□ -1.55
UBXN4-206ENST00000470687 TXKP42681 527 aa5.38□□□□□ -1.55
UBXN4-206ENST00000470687 PSMA6P60900 246 aaKnown RBP5.38□□□□□ -1.55
UBXN4-206ENST00000470687 MEGF10Q96KG7 1140 aa5.38□□□□□ -1.55
UBXN4-206ENST00000470687 SUSD3Q96L08 255 aa5.38□□□□□ -1.55
UBXN4-206ENST00000470687 FMNL2Q96PY5 1086 aa5.38□□□□□ -1.55
UBXN4-206ENST00000470687 PHACTR1Q9C0D0 580 aa5.38□□□□□ -1.55
UBXN4-206ENST00000470687 IGFLR1Q9H665 355 aa5.38□□□□□ -1.55
UBXN4-206ENST00000470687 PCMTD2Q9NV79 361 aa5.38□□□□□ -1.55
UBXN4-206ENST00000470687 DNAJB12Q9NXW2 375 aaKnown RBP5.38□□□□□ -1.55
UBXN4-206ENST00000470687 LZTS3O60299 673 aaPredicted RBP5.37□□□□□ -1.55
UBXN4-206ENST00000470687 RGS9O75916 674 aaPredicted RBP5.37□□□□□ -1.55
UBXN4-206ENST00000470687 SKIP12755 728 aa5.37□□□□□ -1.55
UBXN4-206ENST00000470687 PRR23CQ6ZRP0 262 aa5.37□□□□□ -1.55
UBXN4-206ENST00000470687 FBXO11Q86XK2 927 aa5.37□□□□□ -1.55
UBXN4-206ENST00000470687 DTWD1Q8N5C7 304 aa5.37□□□□□ -1.55
UBXN4-206ENST00000470687 EFCC1Q9HA90 598 aa5.37□□□□□ -1.55
UBXN4-206ENST00000470687 HCN4Q9Y3Q4 1203 aa5.37□□□□□ -1.55
UBXN4-206ENST00000470687 COBLO75128 1261 aa5.36□□□□□ -1.55
UBXN4-206ENST00000470687 YBX3P16989 372 aaKnown RBP eCLIP5.36□□□□□ -1.555e-8■■□□□ 12.7
UBXN4-206ENST00000470687 NCOA4Q13772 614 aa5.36□□□□□ -1.55
UBXN4-206ENST00000470687 MSL1Q68DK7 614 aa5.36□□□□□ -1.55
UBXN4-206ENST00000470687 TSPAN10Q9H1Z9 355 aaPredicted RBP5.36□□□□□ -1.55
UBXN4-206ENST00000470687 GRIK5Q16478 980 aa5.35□□□□□ -1.55
UBXN4-206ENST00000470687 CFAP70Q5T0N1 1121 aa5.35□□□□□ -1.55
UBXN4-206ENST00000470687 LCE1DQ5T752 114 aa5.35□□□□□ -1.55
UBXN4-206ENST00000470687 BTLAQ7Z6A9 289 aa5.35□□□□□ -1.55
UBXN4-206ENST00000470687 NFATC2IPQ8NCF5 419 aa5.35□□□□□ -1.55
UBXN4-206ENST00000470687 KRTAP4-7Q9BYR0 210 aa5.35□□□□□ -1.55
UBXN4-206ENST00000470687 GSX2Q9BZM3 304 aa5.35□□□□□ -1.55
UBXN4-206ENST00000470687 FSTP19883 344 aa5.34□□□□□ -1.55
UBXN4-206ENST00000470687 SSTR4P31391 388 aa5.34□□□□□ -1.55
UBXN4-206ENST00000470687 CD97P48960 835 aa5.34□□□□□ -1.55
UBXN4-206ENST00000470687 IGF2-ASQ6U949 168 aa5.34□□□□□ -1.55
UBXN4-206ENST00000470687 SLC51AQ86UW1 340 aa5.34□□□□□ -1.55
UBXN4-206ENST00000470687 CHMP3Q9Y3E7 222 aa5.34□□□□□ -1.55
UBXN4-206ENST00000470687 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.34□□□□□ -1.55
UBXN4-206ENST00000470687 NFKB1P19838 968 aa5.33□□□□□ -1.56
UBXN4-206ENST00000470687 IRAK1P51617 712 aa5.33□□□□□ -1.56
UBXN4-206ENST00000470687 HDGFL1Q5TGJ6 251 aa5.33□□□□□ -1.56
UBXN4-206ENST00000470687 FAM35AQ86V20 835 aa5.33□□□□□ -1.56
UBXN4-206ENST00000470687 DZIP1LQ8IYY4 767 aaKnown RBP5.33□□□□□ -1.56
UBXN4-206ENST00000470687 TPCN2Q8NHX9 752 aa5.33□□□□□ -1.56
UBXN4-206ENST00000470687 GLMNQ92990 594 aa5.33□□□□□ -1.56
UBXN4-206ENST00000470687 PNMA5Q96PV4 448 aa5.33□□□□□ -1.56
UBXN4-206ENST00000470687 LPIN3Q9BQK8 851 aa5.33□□□□□ -1.56
UBXN4-206ENST00000470687 KIAA1024Q9UPX6 916 aa5.33□□□□□ -1.56
UBXN4-206ENST00000470687 USP17L5A8MUK1 530 aa5.32□□□□□ -1.56
UBXN4-206ENST00000470687 DEAF1O75398 565 aaPredicted RBP5.32□□□□□ -1.56
UBXN4-206ENST00000470687 DKK1O94907 266 aa5.32□□□□□ -1.56
UBXN4-206ENST00000470687 CPB1P15086 417 aa5.32□□□□□ -1.56
UBXN4-206ENST00000470687 PLAURQ03405 335 aa5.32□□□□□ -1.56
UBXN4-206ENST00000470687 WFDC8Q8IUA0 241 aa5.32□□□□□ -1.56
UBXN4-206ENST00000470687 DEPDC4Q8N2C3 294 aa5.32□□□□□ -1.56
UBXN4-206ENST00000470687 CCDC82Q8N4S0 544 aa5.32□□□□□ -1.56
UBXN4-206ENST00000470687 FRRS1LQ9P0K9 344 aa5.32□□□□□ -1.56
UBXN4-206ENST00000470687 ZBTB7BO15156 539 aaPredicted RBP5.31□□□□□ -1.56
UBXN4-206ENST00000470687 CCINQ13939 588 aa5.31□□□□□ -1.56
UBXN4-206ENST00000470687 HIF1AQ16665 826 aa5.31□□□□□ -1.56
UBXN4-206ENST00000470687 PERM1Q5SV97 790 aa5.31□□□□□ -1.56
UBXN4-206ENST00000470687 CCDC102BQ68D86 513 aa5.31□□□□□ -1.56
UBXN4-206ENST00000470687 TRIM50Q86XT4 487 aa5.31□□□□□ -1.56
UBXN4-206ENST00000470687 ALDH16A1Q8IZ83 802 aa5.31□□□□□ -1.56
UBXN4-206ENST00000470687 OAS3Q9Y6K5 1087 aaKnown RBP5.31□□□□□ -1.56
UBXN4-206ENST00000470687 KIAA1324LA8MWY0 1029 aaPredicted RBP5.3□□□□□ -1.56
UBXN4-206ENST00000470687 M0R2N6 131 aa5.3□□□□□ -1.56
UBXN4-206ENST00000470687 DLL1O00548 723 aa5.3□□□□□ -1.56
UBXN4-206ENST00000470687 C21orf2O43822 256 aa5.3□□□□□ -1.56
UBXN4-206ENST00000470687 PPP1R12BO60237 982 aaPredicted RBP5.3□□□□□ -1.56
UBXN4-206ENST00000470687 TAL1P17542 331 aaPredicted RBP5.3□□□□□ -1.56
UBXN4-206ENST00000470687 CLDN10P78369 228 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms