RNA–Protein interactions for RNA: ENST00000470494.5

CDH23-210, Transcript of cadherin related 23, humanhuman

TSL 3

Gene CDH23, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-210ENST00000470494 KLRG2A4D1S0 409 aaPredicted RBP21.38■■□□□ 1.01
CDH23-210ENST00000470494 GOLGA2Q08379 1002 aa21.38■■□□□ 1.01
CDH23-210ENST00000470494 TCIRG1Q13488 830 aa21.38■■□□□ 1.01
CDH23-210ENST00000470494 SOGA3Q5TF21 947 aa21.38■■□□□ 1.01
CDH23-210ENST00000470494 ANKRD13DQ6ZTN6 518 aa21.38■■□□□ 1.01
CDH23-210ENST00000470494 TSPYL6Q8N831 410 aa21.38■■□□□ 1.01
CDH23-210ENST00000470494 RIC1Q4ADV7 1423 aa21.38■■□□□ 1.01
CDH23-210ENST00000470494 IL16Q14005 1332 aa21.37■■□□□ 1.01
CDH23-210ENST00000470494 CCDC30Q5VVM6 783 aa21.37■■□□□ 1.01
CDH23-210ENST00000470494 NLRP10Q86W26 655 aa21.37■■□□□ 1.01
CDH23-210ENST00000470494 TAOK3Q9H2K8 898 aa21.37■■□□□ 1.01
CDH23-210ENST00000470494 TRMT112Q9UI30 125 aaKnown RBP21.37■■□□□ 1.01
CDH23-210ENST00000470494 C1QTNF8P60827 252 aa21.36■■□□□ 1.01
CDH23-210ENST00000470494 RIC3Q7Z5B4 369 aa21.36■■□□□ 1.01
CDH23-210ENST00000470494 CHMP4AQ9BY43 222 aa21.36■■□□□ 1.01
CDH23-210ENST00000470494 PHAXQ9H814 394 aaKnown RBP21.36■■□□□ 1.01
CDH23-210ENST00000470494 FANCIQ9NVI1 1328 aa21.35■■□□□ 1.01
CDH23-210ENST00000470494 ATP5J2-PTCD1G3V325 749 aa21.35■■□□□ 1.01
CDH23-210ENST00000470494 TCERG1O14776 1098 aaKnown RBP21.35■■□□□ 1.01
CDH23-210ENST00000470494 ALDH1B1P30837 517 aa21.35■■□□□ 1.01
CDH23-210ENST00000470494 TWISTNBQ3B726 338 aaPredicted RBP21.35■■□□□ 1.01
CDH23-210ENST00000470494 CRY2Q49AN0 593 aa21.35■■□□□ 1.01
CDH23-210ENST00000470494 NCBP3Q53F19 620 aaKnown RBP21.35■■□□□ 1.01
CDH23-210ENST00000470494 CCDC93Q567U6 631 aa21.35■■□□□ 1.01
CDH23-210ENST00000470494 STK31Q9BXU1 1019 aa21.35■■□□□ 1.01
CDH23-210ENST00000470494 RNF123Q5XPI4 1314 aa21.34■■□□□ 1.01
CDH23-210ENST00000470494 CACNA1FO60840 1977 aa21.34■■□□□ 1.01
CDH23-210ENST00000470494 PRELPP51888 382 aa21.34■■□□□ 1.01
CDH23-210ENST00000470494 C3orf67Q6ZVT6 689 aa21.34■■□□□ 1.01
CDH23-210ENST00000470494 WDR63Q8IWG1 891 aa21.34■■□□□ 1.01
CDH23-210ENST00000470494 NLRP3Q96P20 1036 aa21.34■■□□□ 1.01
CDH23-210ENST00000470494 DDX60Q8IY21 1712 aaKnown RBP21.34■■□□□ 1.01
CDH23-210ENST00000470494 SH3TC1Q8TE82 1336 aa21.33■■□□□ 1.01
CDH23-210ENST00000470494 HCLS1P14317 486 aaPredicted RBP21.33■■□□□ 1.01
CDH23-210ENST00000470494 OLFM4Q6UX06 510 aa21.33■■□□□ 1.01
CDH23-210ENST00000470494 RBM17Q96I25 401 aaKnown RBP21.33■■□□□ 1.01
CDH23-210ENST00000470494 KDM2BQ8NHM5 1336 aa21.32■■□□□ 1
CDH23-210ENST00000470494 SYNE4Q8N205 404 aa21.32■■□□□ 1
CDH23-210ENST00000470494 NMRK2Q9NPI5 230 aa21.32■■□□□ 1
CDH23-210ENST00000470494 TAF1P21675 1872 aa21.32■■□□□ 1
CDH23-210ENST00000470494 LTBP3Q9NS15 1303 aa21.31■■□□□ 1
CDH23-210ENST00000470494 DDX58O95786 925 aaKnown RBP21.31■■□□□ 1
CDH23-210ENST00000470494 RTL5Q5HYW3 569 aaPredicted RBP21.31■■□□□ 1
CDH23-210ENST00000470494 C7orf43Q8WVR3 580 aa21.31■■□□□ 1
CDH23-210ENST00000470494 ZC3H4Q9UPT8 1303 aaKnown RBP21.3■■□□□ 1
CDH23-210ENST00000470494 MYD88Q99836 296 aa21.3■■□□□ 1
CDH23-210ENST00000470494 ISCA1Q9BUE6 129 aa21.3■■□□□ 1
CDH23-210ENST00000470494 KIF3CO14782 793 aa21.29■■□□□ 1
CDH23-210ENST00000470494 PPEF1O14829 653 aaPredicted RBP21.29■■□□□ 1
CDH23-210ENST00000470494 HOXA10P31260 410 aaPredicted RBP21.29■■□□□ 1
CDH23-210ENST00000470494 FKBP4Q02790 459 aaKnown RBP eCLIP21.28■■□□□ 1
CDH23-210ENST00000470494 SLC10A5Q5PT55 438 aa21.28■■□□□ 1
CDH23-210ENST00000470494 C16orf71Q8IYS4 520 aaPredicted RBP21.28■■□□□ 1
CDH23-210ENST00000470494 RTKN2Q8IZC4 609 aa21.28■■□□□ 1
CDH23-210ENST00000470494 FAM89AQ96GI7 184 aa21.28■■□□□ 1
CDH23-210ENST00000470494 CRAMP1Q96RY5 1269 aa21.28■■□□□ 1
CDH23-210ENST00000470494 MYH16Q9H6N6 1097 aa21.28■■□□□ 1
CDH23-210ENST00000470494 EXOSC9Q06265 439 aaKnown RBP21.27■■□□□ 1
CDH23-210ENST00000470494 TMX4Q9H1E5 349 aaPredicted RBP21.27■■□□□ 1
CDH23-210ENST00000470494 SPINK5Q9NQ38 1064 aaPredicted RBP21.27■■□□□ 1
CDH23-210ENST00000470494 ZNF277Q9NRM2 450 aaPredicted RBP21.27■■□□□ 1
CDH23-210ENST00000470494 ABCC4O15439 1325 aa21.27■□□□□ 0.99
CDH23-210ENST00000470494 MAP3K2Q9Y2U5 619 aa21.26■□□□□ 0.99
CDH23-210ENST00000470494 SLC4A2P04920 1241 aa21.25■□□□□ 0.99
CDH23-210ENST00000470494 DDX46Q7L014 1031 aaKnown RBP21.25■□□□□ 0.99
CDH23-210ENST00000470494 SLC51AQ86UW1 340 aa21.25■□□□□ 0.99
CDH23-210ENST00000470494 RRAGCQ9HB90 399 aa21.25■□□□□ 0.99
CDH23-210ENST00000470494 PI4KAP2A4QPH2 592 aa21.24■□□□□ 0.99
CDH23-210ENST00000470494 GLTPD2A6NH11 291 aa21.24■□□□□ 0.99
CDH23-210ENST00000470494 PI4KAP1Q8N8J0 262 aa21.24■□□□□ 0.99
CDH23-210ENST00000470494 METTL22Q9BUU2 404 aaPredicted RBP21.24■□□□□ 0.99
CDH23-210ENST00000470494 MYH3P11055 1940 aa21.23■□□□□ 0.99
CDH23-210ENST00000470494 IRS4O14654 1257 aaPredicted RBP21.23■□□□□ 0.99
CDH23-210ENST00000470494 TRIM28Q13263 835 aaKnown RBP21.23■□□□□ 0.99
CDH23-210ENST00000470494 CC2D2BQ6DHV5 1058 aa21.23■□□□□ 0.99
CDH23-210ENST00000470494 DPY19L2Q6NUT2 758 aa21.23■□□□□ 0.99
CDH23-210ENST00000470494 KSR2Q6VAB6 950 aa21.23■□□□□ 0.99
CDH23-210ENST00000470494 G2E3Q7L622 706 aa21.23■□□□□ 0.99
CDH23-210ENST00000470494 CWC25Q9NXE8 425 aaPredicted RBP21.23■□□□□ 0.99
CDH23-210ENST00000470494 IARSP41252 1262 aaKnown RBP21.22■□□□□ 0.99
CDH23-210ENST00000470494 NEXNQ0ZGT2 675 aa21.22■□□□□ 0.99
CDH23-210ENST00000470494 CCDC191Q8NCU4 936 aa21.22■□□□□ 0.99
CDH23-210ENST00000470494 CCER2I3L3R5 266 aa21.21■□□□□ 0.99
CDH23-210ENST00000470494 VAMP4O75379 141 aa21.21■□□□□ 0.99
CDH23-210ENST00000470494 FLIIQ13045 1269 aa21.21■□□□□ 0.99
CDH23-210ENST00000470494 FKBP5Q13451 457 aaPredicted RBP21.21■□□□□ 0.99
CDH23-210ENST00000470494 ZBTB38Q8NAP3 1195 aaPredicted RBP21.21■□□□□ 0.99
CDH23-210ENST00000470494 JARID2Q92833 1246 aaPredicted RBP21.21■□□□□ 0.99
CDH23-210ENST00000470494 WDR90Q96KV7 1748 aa21.21■□□□□ 0.99
CDH23-210ENST00000470494 SNED1Q8TER0 1413 aa21.21■□□□□ 0.99
CDH23-210ENST00000470494 TOMM70O94826 608 aa21.2■□□□□ 0.98
CDH23-210ENST00000470494 GRAPQ13588 217 aa21.2■□□□□ 0.98
CDH23-210ENST00000470494 GRAPLQ8TC17 118 aaPredicted RBP21.2■□□□□ 0.98
CDH23-210ENST00000470494 PSMD1Q99460 953 aa21.2■□□□□ 0.98
CDH23-210ENST00000470494 ATP6V0A2Q9Y487 856 aa21.2■□□□□ 0.98
CDH23-210ENST00000470494 HSP90B1P14625 803 aaKnown RBP21.19■□□□□ 0.98
CDH23-210ENST00000470494 BBOX1O75936 387 aa21.18■□□□□ 0.98
CDH23-210ENST00000470494 PCCAP05165 728 aaPredicted RBP21.18■□□□□ 0.98
CDH23-210ENST00000470494 GRIPAP1Q4V328 841 aa21.18■□□□□ 0.98
CDH23-210ENST00000470494 JDP2Q8WYK2 163 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms