RNA–Protein interactions for RNA: ENST00000470470.1

CHD6-206, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 5

Gene CHD6, Length 1,349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-206ENST00000470470 APAF1O14727 1248 aa8.26□□□□□ -1.09
CHD6-206ENST00000470470 FLIIQ13045 1269 aa8.26□□□□□ -1.09
CHD6-206ENST00000470470 C14orf37Q86TY3 774 aa8.26□□□□□ -1.09
CHD6-206ENST00000470470 WDR63Q8IWG1 891 aa8.26□□□□□ -1.09
CHD6-206ENST00000470470 RUNDC1Q96C34 613 aa8.26□□□□□ -1.09
CHD6-206ENST00000470470 CFAP53Q96M91 514 aa8.26□□□□□ -1.09
CHD6-206ENST00000470470 IQSEC2Q5JU85 1478 aa8.25□□□□□ -1.09
CHD6-206ENST00000470470 KNDC1Q76NI1 1749 aa8.25□□□□□ -1.09
CHD6-206ENST00000470470 SENP3-EIF4A1A0A087X0R7 540 aa8.25□□□□□ -1.09
CHD6-206ENST00000470470 VASH1Q7L8A9 365 aaPredicted RBP8.25□□□□□ -1.09
CHD6-206ENST00000470470 CCDC116Q8IYX3 515 aa8.25□□□□□ -1.09
CHD6-206ENST00000470470 LILRB3O75022 631 aa8.24□□□□□ -1.09
CHD6-206ENST00000470470 RFC5P40937 340 aa8.24□□□□□ -1.09
CHD6-206ENST00000470470 TMEM259Q4ZIN3 620 aa8.24□□□□□ -1.09
CHD6-206ENST00000470470 FBXO31Q5XUX0 539 aaPredicted RBP8.24□□□□□ -1.09
CHD6-206ENST00000470470 PPP2R2DQ66LE6 453 aa8.24□□□□□ -1.09
CHD6-206ENST00000470470 WWC1Q8IX03 1113 aa8.24□□□□□ -1.09
CHD6-206ENST00000470470 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.24□□□□□ -1.09
CHD6-206ENST00000470470 NANOS1Q8WY41 292 aaKnown RBP8.24□□□□□ -1.09
CHD6-206ENST00000470470 CNTNAP3BQ96NU0 1288 aa8.24□□□□□ -1.09
CHD6-206ENST00000470470 CRBNQ96SW2 442 aa8.24□□□□□ -1.09
CHD6-206ENST00000470470 KRTAP4-8Q9BYQ9 185 aa8.24□□□□□ -1.09
CHD6-206ENST00000470470 CNTNAP3Q9BZ76 1288 aa8.24□□□□□ -1.09
CHD6-206ENST00000470470 TERF2IPQ9NYB0 399 aa8.24□□□□□ -1.09
CHD6-206ENST00000470470 KIF20BQ96Q89 1820 aa8.24□□□□□ -1.09
CHD6-206ENST00000470470 CD163L1Q9NR16 1453 aa8.23□□□□□ -1.09
CHD6-206ENST00000470470 ADGRB2O60241 1585 aa8.23□□□□□ -1.09
CHD6-206ENST00000470470 RIMS2Q9UQ26 1411 aa8.23□□□□□ -1.09
CHD6-206ENST00000470470 TTLL8A6PVC2 850 aa8.23□□□□□ -1.09
CHD6-206ENST00000470470 IRS1P35568 1242 aa8.23□□□□□ -1.09
CHD6-206ENST00000470470 MTHFSP49914 203 aa8.23□□□□□ -1.09
CHD6-206ENST00000470470 AAMPQ13685 434 aa8.23□□□□□ -1.09
CHD6-206ENST00000470470 PDE3AQ14432 1141 aa8.23□□□□□ -1.09
CHD6-206ENST00000470470 QPCTQ16769 361 aa8.23□□□□□ -1.09
CHD6-206ENST00000470470 KANK3Q6NY19 840 aa8.23□□□□□ -1.09
CHD6-206ENST00000470470 SH3BP5LQ7L8J4 393 aa8.23□□□□□ -1.09
CHD6-206ENST00000470470 HELBQ8NG08 1087 aaPredicted RBP8.23□□□□□ -1.09
CHD6-206ENST00000470470 CABLES1Q8TDN4 633 aa8.23□□□□□ -1.09
CHD6-206ENST00000470470 NLRP1Q9C000 1473 aa8.23□□□□□ -1.09
CHD6-206ENST00000470470 NRXN3Q9Y4C0 1643 aa8.22□□□□□ -1.09
CHD6-206ENST00000470470 COL3A1P02461 1466 aaPredicted RBP8.22□□□□□ -1.09
CHD6-206ENST00000470470 ATP7BP35670 1465 aa8.22□□□□□ -1.09
CHD6-206ENST00000470470 A0A1W2PP64 1363 aa8.22□□□□□ -1.09
CHD6-206ENST00000470470 PTSQ03393 145 aa8.22□□□□□ -1.09
CHD6-206ENST00000470470 ZNF385CQ66K41 422 aaPredicted RBP8.22□□□□□ -1.09
CHD6-206ENST00000470470 CCDC146Q8IYE0 955 aa8.22□□□□□ -1.09
CHD6-206ENST00000470470 TSC1Q92574 1164 aa8.22□□□□□ -1.09
CHD6-206ENST00000470470 GPKOWQ92917 476 aaPredicted RBP eCLIP8.22□□□□□ -1.096e-6■□□□□ 11.1
CHD6-206ENST00000470470 TECPR2O15040 1411 aa8.21□□□□□ -1.09
CHD6-206ENST00000470470 FAM135BQ49AJ0 1406 aa8.21□□□□□ -1.09
CHD6-206ENST00000470470 KDM2BQ8NHM5 1336 aa8.21□□□□□ -1.09
CHD6-206ENST00000470470 CDC42BPGQ6DT37 1551 aa8.21□□□□□ -1.1
CHD6-206ENST00000470470 PNPLA6Q8IY17 1366 aa8.21□□□□□ -1.1
CHD6-206ENST00000470470 APBB1O00213 710 aa8.21□□□□□ -1.1
CHD6-206ENST00000470470 PLIN1O60240 522 aa8.21□□□□□ -1.1
CHD6-206ENST00000470470 CENPQQ7L2Z9 268 aaPredicted RBP8.21□□□□□ -1.1
CHD6-206ENST00000470470 SVOPQ8N4V2 548 aa8.21□□□□□ -1.1
CHD6-206ENST00000470470 GPR161Q8N6U8 529 aaKnown RBP8.21□□□□□ -1.1
CHD6-206ENST00000470470 PRAM1Q96QH2 718 aa8.21□□□□□ -1.1
CHD6-206ENST00000470470 POGKQ9P215 609 aa8.21□□□□□ -1.1
CHD6-206ENST00000470470 ZMYM3Q14202 1370 aa8.2□□□□□ -1.1
CHD6-206ENST00000470470 FYB1O15117 783 aa8.2□□□□□ -1.1
CHD6-206ENST00000470470 AP1G2O75843 785 aa8.2□□□□□ -1.1
CHD6-206ENST00000470470 CT47B1P0C2W7 299 aaPredicted RBP8.2□□□□□ -1.1
CHD6-206ENST00000470470 SRPK2P78362 688 aaKnown RBP8.2□□□□□ -1.1
CHD6-206ENST00000470470 Q6ZVU0 165 aa8.2□□□□□ -1.1
CHD6-206ENST00000470470 HDGFL2Q7Z4V5 671 aaPredicted RBP8.2□□□□□ -1.1
CHD6-206ENST00000470470 TCP11L2Q8N4U5 519 aa8.2□□□□□ -1.1
CHD6-206ENST00000470470 BANK1Q8NDB2 785 aa8.2□□□□□ -1.1
CHD6-206ENST00000470470 CDK19Q9BWU1 502 aa8.2□□□□□ -1.1
CHD6-206ENST00000470470 COL25A1Q9BXS0 654 aaPredicted RBP8.2□□□□□ -1.1
CHD6-206ENST00000470470 PNNQ9H307 717 aaKnown RBP8.2□□□□□ -1.1
CHD6-206ENST00000470470 PGPEP1Q9NXJ5 209 aa8.2□□□□□ -1.1
CHD6-206ENST00000470470 STK26Q9P289 416 aa8.2□□□□□ -1.1
CHD6-206ENST00000470470 UBR1Q8IWV7 1749 aa8.19□□□□□ -1.1
CHD6-206ENST00000470470 MAGEB6P1A0A0J9YX57 407 aa8.19□□□□□ -1.1
CHD6-206ENST00000470470 SPINT1O43278 529 aa8.19□□□□□ -1.1
CHD6-206ENST00000470470 C20orf194Q5TEA3 1177 aa8.19□□□□□ -1.1
CHD6-206ENST00000470470 BACH2Q9BYV9 841 aa8.19□□□□□ -1.1
CHD6-206ENST00000470470 IL16Q14005 1332 aa8.19□□□□□ -1.1
CHD6-206ENST00000470470 AKAP12Q02952 1782 aa8.18□□□□□ -1.1
CHD6-206ENST00000470470 CPS1P31327 1500 aa8.18□□□□□ -1.1
CHD6-206ENST00000470470 MAP2P11137 1827 aaKnown RBP8.18□□□□□ -1.1
CHD6-206ENST00000470470 ADAM23O75077 832 aa8.18□□□□□ -1.1
CHD6-206ENST00000470470 CPSF1Q10570 1443 aaKnown RBP8.18□□□□□ -1.1
CHD6-206ENST00000470470 RTL5Q5HYW3 569 aaPredicted RBP8.18□□□□□ -1.1
CHD6-206ENST00000470470 MON2Q7Z3U7 1717 aa8.18□□□□□ -1.1
CHD6-206ENST00000470470 CCDC155Q8N6L0 562 aa8.18□□□□□ -1.1
CHD6-206ENST00000470470 PLEKHF1Q96S99 279 aa8.18□□□□□ -1.1
CHD6-206ENST00000470470 PRM3Q9NNZ6 103 aa8.18□□□□□ -1.1
CHD6-206ENST00000470470 CDV3Q9UKY7 258 aaKnown RBP8.18□□□□□ -1.1
CHD6-206ENST00000470470 SLURP2P0DP57 97 aa8.17□□□□□ -1.1
CHD6-206ENST00000470470 ERFEQ4G0M1 354 aa8.17□□□□□ -1.1
CHD6-206ENST00000470470 MYH16Q9H6N6 1097 aa8.17□□□□□ -1.1
CHD6-206ENST00000470470 TNRQ92752 1358 aa8.16□□□□□ -1.1
CHD6-206ENST00000470470 EDC4Q6P2E9 1401 aaKnown RBP8.16□□□□□ -1.1
CHD6-206ENST00000470470 SLC35F4A4IF30 521 aa8.16□□□□□ -1.1
CHD6-206ENST00000470470 WASLO00401 505 aaPredicted RBP8.16□□□□□ -1.1
CHD6-206ENST00000470470 ARHGEF15O94989 841 aa8.16□□□□□ -1.1
CHD6-206ENST00000470470 RARSP54136 660 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms