RNA–Protein interactions for RNA: ENST00000469881.1

NUP98-209, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-209ENST00000469881 PSMD1Q99460 953 aa12.71□□□□□ -0.37
NUP98-209ENST00000469881 CNGB1Q14028 1251 aaPredicted RBP12.7□□□□□ -0.38
NUP98-209ENST00000469881 CRY2Q49AN0 593 aa12.7□□□□□ -0.38
NUP98-209ENST00000469881 MCM10Q7L590 875 aa12.7□□□□□ -0.38
NUP98-209ENST00000469881 WBP1LQ9NX94 342 aa12.7□□□□□ -0.38
NUP98-209ENST00000469881 CLEC11AQ9Y240 323 aa12.7□□□□□ -0.38
NUP98-209ENST00000469881 NUDCQ9Y266 331 aa12.7□□□□□ -0.38
NUP98-209ENST00000469881 FAM177BA6PVY3 158 aa12.69□□□□□ -0.38
NUP98-209ENST00000469881 MAP1SQ66K74 1059 aaPredicted RBP12.69□□□□□ -0.38
NUP98-209ENST00000469881 CNTROBQ8N137 903 aa12.69□□□□□ -0.38
NUP98-209ENST00000469881 HTATSF1O43719 755 aaKnown RBP12.68□□□□□ -0.38
NUP98-209ENST00000469881 GTF2E1P29083 439 aaPredicted RBP12.68□□□□□ -0.38
NUP98-209ENST00000469881 LBX1P52954 281 aa12.68□□□□□ -0.38
NUP98-209ENST00000469881 HLFQ16534 295 aa12.68□□□□□ -0.38
NUP98-209ENST00000469881 DEFB115Q30KQ5 88 aa12.68□□□□□ -0.38
NUP98-209ENST00000469881 CC2D2BQ6DHV5 1058 aa12.68□□□□□ -0.38
NUP98-209ENST00000469881 SYNE4Q8N205 404 aa12.68□□□□□ -0.38
NUP98-209ENST00000469881 JDP2Q8WYK2 163 aa12.68□□□□□ -0.38
NUP98-209ENST00000469881 NYXQ9GZU5 481 aa12.68□□□□□ -0.38
NUP98-209ENST00000469881 SPINK5Q9NQ38 1064 aaPredicted RBP12.68□□□□□ -0.38
NUP98-209ENST00000469881 WDR33Q9C0J8 1336 aaKnown RBP12.67□□□□□ -0.38
NUP98-209ENST00000469881 U2AF1L5P0DN76 240 aaPredicted RBP12.67□□□□□ -0.38
NUP98-209ENST00000469881 HSPA8P11142 646 aaKnown RBP12.67□□□□□ -0.38
NUP98-209ENST00000469881 U2AF1Q01081 240 aaKnown RBP eCLIP12.67□□□□□ -0.38
NUP98-209ENST00000469881 MAP2K1Q02750 393 aaPredicted RBP12.67□□□□□ -0.38
NUP98-209ENST00000469881 DCTN1Q14203 1278 aa12.67□□□□□ -0.38
NUP98-209ENST00000469881 LRRC37AA6NMS7 1700 aa12.67□□□□□ -0.38
NUP98-209ENST00000469881 ERVV-1B6SEH8 477 aa12.66□□□□□ -0.38
NUP98-209ENST00000469881 LMOD1P29536 600 aaPredicted RBP12.66□□□□□ -0.38
NUP98-209ENST00000469881 EIF6P56537 245 aaKnown RBP12.66□□□□□ -0.38
NUP98-209ENST00000469881 GRIPAP1Q4V328 841 aa12.66□□□□□ -0.38
NUP98-209ENST00000469881 RPGRQ92834 1020 aaKnown RBP12.66□□□□□ -0.38
NUP98-209ENST00000469881 DDX21Q9NR30 783 aaKnown RBP eCLIP12.66□□□□□ -0.38
NUP98-209ENST00000469881 ABT1Q9ULW3 272 aaKnown RBP12.66□□□□□ -0.38
NUP98-209ENST00000469881 DDX60Q8IY21 1712 aaKnown RBP12.65□□□□□ -0.38
NUP98-209ENST00000469881 MAP3K15Q6ZN16 1313 aa12.65□□□□□ -0.38
NUP98-209ENST00000469881 HOXA10P31260 410 aaPredicted RBP12.65□□□□□ -0.38
NUP98-209ENST00000469881 SCNN1DP51172 638 aa12.65□□□□□ -0.38
NUP98-209ENST00000469881 TAF7Q15545 349 aaPredicted RBP12.65□□□□□ -0.38
NUP98-209ENST00000469881 NUTM1Q86Y26 1132 aa12.65□□□□□ -0.38
NUP98-209ENST00000469881 GJA3Q9Y6H8 435 aa12.65□□□□□ -0.38
NUP98-209ENST00000469881 UBN2Q6ZU65 1347 aa12.64□□□□□ -0.39
NUP98-209ENST00000469881 PPP2R1AP30153 589 aa12.64□□□□□ -0.39
NUP98-209ENST00000469881 KIF6Q6ZMV9 814 aa12.64□□□□□ -0.39
NUP98-209ENST00000469881 ABHD8Q96I13 439 aa12.64□□□□□ -0.39
NUP98-209ENST00000469881 PPEF1O14829 653 aaPredicted RBP12.63□□□□□ -0.39
NUP98-209ENST00000469881 ECE1P42892 770 aa12.63□□□□□ -0.39
NUP98-209ENST00000469881 USP50Q70EL3 339 aaPredicted RBP12.63□□□□□ -0.39
NUP98-209ENST00000469881 LARGE2Q8N3Y3 721 aa12.63□□□□□ -0.39
NUP98-209ENST00000469881 PNISRQ8TF01 805 aaKnown RBP12.63□□□□□ -0.39
NUP98-209ENST00000469881 TAF1P21675 1872 aa12.63□□□□□ -0.39
NUP98-209ENST00000469881 EPS15P42566 896 aa12.62□□□□□ -0.39
NUP98-209ENST00000469881 NIM1KQ8IY84 436 aa12.62□□□□□ -0.39
NUP98-209ENST00000469881 NGEFQ8N5V2 710 aa12.62□□□□□ -0.39
NUP98-209ENST00000469881 CAPNS2Q96L46 248 aa12.62□□□□□ -0.39
NUP98-209ENST00000469881 CRAMP1Q96RY5 1269 aa12.62□□□□□ -0.39
NUP98-209ENST00000469881 ERBB4Q15303 1308 aa12.62□□□□□ -0.39
NUP98-209ENST00000469881 NTSR2O95665 410 aa12.61□□□□□ -0.39
NUP98-209ENST00000469881 GPTP24298 496 aa12.61□□□□□ -0.39
NUP98-209ENST00000469881 TTLL7Q6ZT98 887 aa12.61□□□□□ -0.39
NUP98-209ENST00000469881 PAXIP1Q6ZW49 1069 aaPredicted RBP12.61□□□□□ -0.39
NUP98-209ENST00000469881 RBM17Q96I25 401 aaKnown RBP12.61□□□□□ -0.39
NUP98-209ENST00000469881 BEGAINQ9BUH8 593 aa12.61□□□□□ -0.39
NUP98-209ENST00000469881 ZBTB3Q9H5J0 574 aa12.61□□□□□ -0.39
NUP98-209ENST00000469881 MIS18AQ9NYP9 233 aa12.61□□□□□ -0.39
NUP98-209ENST00000469881 DUOX1Q9NRD9 1551 aa12.6□□□□□ -0.39
NUP98-209ENST00000469881 PPIP5K2O43314 1243 aa12.6□□□□□ -0.39
NUP98-209ENST00000469881 NEFMP07197 916 aa12.6□□□□□ -0.39
NUP98-209ENST00000469881 MYL6BP14649 208 aa12.6□□□□□ -0.39
NUP98-209ENST00000469881 EIF4A1P60842 406 aaKnown RBP12.6□□□□□ -0.39
NUP98-209ENST00000469881 FMR1Q06787 632 aaKnown RBP eCLIP12.6□□□□□ -0.39
NUP98-209ENST00000469881 FAM161AQ3B820 660 aa12.6□□□□□ -0.39
NUP98-209ENST00000469881 SUSD4Q5VX71 490 aa12.6□□□□□ -0.39
NUP98-209ENST00000469881 CYP4F22Q6NT55 531 aa12.6□□□□□ -0.39
NUP98-209ENST00000469881 SLC51AQ86UW1 340 aa12.6□□□□□ -0.39
NUP98-209ENST00000469881 ZNF34Q8IZ26 560 aa12.6□□□□□ -0.39
NUP98-209ENST00000469881 VPS33BQ9H267 617 aa12.6□□□□□ -0.39
NUP98-209ENST00000469881 RRP7AQ9Y3A4 280 aaKnown RBP12.6□□□□□ -0.39
NUP98-209ENST00000469881 TLL2Q9Y6L7 1015 aa12.6□□□□□ -0.39
NUP98-209ENST00000469881 CDHR2Q9BYE9 1310 aa12.6□□□□□ -0.39
NUP98-209ENST00000469881 CASP8AP2Q9UKL3 1982 aa12.6□□□□□ -0.39
NUP98-209ENST00000469881 TRAF5O00463 557 aa12.59□□□□□ -0.39
NUP98-209ENST00000469881 CST9Q5W186 159 aa12.59□□□□□ -0.39
NUP98-209ENST00000469881 GIGYF2Q6Y7W6 1299 aaKnown RBP12.59□□□□□ -0.39
NUP98-209ENST00000469881 GPR101Q96P66 508 aaPredicted RBP12.59□□□□□ -0.39
NUP98-209ENST00000469881 ADARB2Q9NS39 739 aaKnown RBP12.59□□□□□ -0.39
NUP98-209ENST00000469881 GPRC5DQ9NZD1 345 aa12.59□□□□□ -0.39
NUP98-209ENST00000469881 SLC34A2O95436 690 aa12.58□□□□□ -0.4
NUP98-209ENST00000469881 GRM1Q13255 1194 aa12.58□□□□□ -0.4
NUP98-209ENST00000469881 POLA2Q14181 598 aa12.58□□□□□ -0.4
NUP98-209ENST00000469881 AOC3Q16853 763 aa12.58□□□□□ -0.4
NUP98-209ENST00000469881 PARP10Q53GL7 1025 aa12.58□□□□□ -0.4
NUP98-209ENST00000469881 C3orf67Q6ZVT6 689 aa12.58□□□□□ -0.4
NUP98-209ENST00000469881 PPP1R42Q7Z4L9 355 aa12.58□□□□□ -0.4
NUP98-209ENST00000469881 SUPT20HQ8NEM7 779 aa12.58□□□□□ -0.4
NUP98-209ENST00000469881 TMX4Q9H1E5 349 aaPredicted RBP12.58□□□□□ -0.4
NUP98-209ENST00000469881 ATP6V0A2Q9Y487 856 aa12.58□□□□□ -0.4
NUP98-209ENST00000469881 ABCC4O15439 1325 aa12.58□□□□□ -0.4
NUP98-209ENST00000469881 PSME4Q14997 1843 aa12.58□□□□□ -0.4
NUP98-209ENST00000469881 AKAP11Q9UKA4 1901 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms