RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 ARHGAP23Q9P227 1491 aa12.28□□□□□ -0.44
SMC4-210ENST00000469762 NFAT5O94916 1531 aa12.28□□□□□ -0.44
SMC4-210ENST00000469762 SLC27A2O14975 620 aa12.28□□□□□ -0.44
SMC4-210ENST00000469762 PLCB2Q00722 1185 aa12.28□□□□□ -0.44
SMC4-210ENST00000469762 RBM43Q6ZSC3 357 aaKnown RBP12.28□□□□□ -0.44
SMC4-210ENST00000469762 EAF2Q96CJ1 260 aaPredicted RBP12.28□□□□□ -0.44
SMC4-210ENST00000469762 A0A0D9SFI3 127 aa12.27□□□□□ -0.44
SMC4-210ENST00000469762 CTIFO43310 598 aaKnown RBP12.27□□□□□ -0.44
SMC4-210ENST00000469762 PTGS1P23219 599 aa12.27□□□□□ -0.44
SMC4-210ENST00000469762 NMIQ13287 307 aaPredicted RBP12.27□□□□□ -0.44
SMC4-210ENST00000469762 CWF19L2Q2TBE0 894 aaKnown RBP12.27□□□□□ -0.44
SMC4-210ENST00000469762 ANKRD7Q92527 254 aa12.27□□□□□ -0.44
SMC4-210ENST00000469762 NRBP1Q9UHY1 535 aa12.27□□□□□ -0.44
SMC4-210ENST00000469762 KIF3AQ9Y496 699 aa12.27□□□□□ -0.44
SMC4-210ENST00000469762 ELP1O95163 1332 aa12.27□□□□□ -0.44
SMC4-210ENST00000469762 JCADQ9P266 1359 aa12.27□□□□□ -0.44
SMC4-210ENST00000469762 SLIT1O75093 1534 aa12.27□□□□□ -0.44
SMC4-210ENST00000469762 HOXB7P09629 217 aa12.27□□□□□ -0.45
SMC4-210ENST00000469762 PXDNQ92626 1479 aa12.27□□□□□ -0.45
SMC4-210ENST00000469762 HEG1Q9ULI3 1381 aa12.27□□□□□ -0.45
SMC4-210ENST00000469762 TYRO3Q06418 890 aa12.27□□□□□ -0.45
SMC4-210ENST00000469762 LRMPQ12912 555 aa12.27□□□□□ -0.45
SMC4-210ENST00000469762 CHMP3Q9Y3E7 222 aa12.27□□□□□ -0.45
SMC4-210ENST00000469762 CEBPAP49715 358 aaPredicted RBP12.26□□□□□ -0.45
SMC4-210ENST00000469762 CLASRPQ8N2M8 674 aaKnown RBP12.26□□□□□ -0.45
SMC4-210ENST00000469762 MED23Q9ULK4 1368 aa12.26□□□□□ -0.45
SMC4-210ENST00000469762 FAM200AQ8TCP9 573 aa12.26□□□□□ -0.45
SMC4-210ENST00000469762 EVI5LQ96CN4 794 aa12.26□□□□□ -0.45
SMC4-210ENST00000469762 PGBD1Q96JS3 809 aa12.26□□□□□ -0.45
SMC4-210ENST00000469762 CCDC192P0DO97 292 aa12.26□□□□□ -0.45
SMC4-210ENST00000469762 HSP90AB4PQ58FF6 505 aa12.26□□□□□ -0.45
SMC4-210ENST00000469762 LARP1BQ659C4 914 aaKnown RBP12.26□□□□□ -0.45
SMC4-210ENST00000469762 ZNF589Q86UQ0 364 aaPredicted RBP12.26□□□□□ -0.45
SMC4-210ENST00000469762 CBX8Q9HC52 389 aa12.26□□□□□ -0.45
SMC4-210ENST00000469762 MAP3K2Q9Y2U5 619 aa12.26□□□□□ -0.45
SMC4-210ENST00000469762 SIPA1L3O60292 1781 aaPredicted RBP12.26□□□□□ -0.45
SMC4-210ENST00000469762 PPP4R3BQ5MIZ7 849 aa12.25□□□□□ -0.45
SMC4-210ENST00000469762 LARP1Q6PKG0 1096 aaKnown RBP12.25□□□□□ -0.45
SMC4-210ENST00000469762 CKAP2LQ8IYA6 745 aa12.25□□□□□ -0.45
SMC4-210ENST00000469762 DACT1Q9NYF0 836 aa12.25□□□□□ -0.45
SMC4-210ENST00000469762 TBX22Q9Y458 520 aa12.25□□□□□ -0.45
SMC4-210ENST00000469762 DMTNQ08495 405 aa12.25□□□□□ -0.45
SMC4-210ENST00000469762 RUFY2Q8WXA3 655 aa12.25□□□□□ -0.45
SMC4-210ENST00000469762 SUCLG2Q96I99 432 aa12.25□□□□□ -0.45
SMC4-210ENST00000469762 TFIP11Q9UBB9 837 aaKnown RBP12.25□□□□□ -0.45
SMC4-210ENST00000469762 AACSQ86V21 672 aa12.25□□□□□ -0.45
SMC4-210ENST00000469762 PLA2G4DQ86XP0 818 aa12.25□□□□□ -0.45
SMC4-210ENST00000469762 ABTB2Q8N961 1025 aa12.25□□□□□ -0.45
SMC4-210ENST00000469762 ESF1Q9H501 851 aaKnown RBP12.25□□□□□ -0.45
SMC4-210ENST00000469762 ADGRL3Q9HAR2 1447 aa12.25□□□□□ -0.45
SMC4-210ENST00000469762 CHGBP05060 677 aa12.24□□□□□ -0.45
SMC4-210ENST00000469762 CBX1P83916 185 aa12.24□□□□□ -0.45
SMC4-210ENST00000469762 ANKARQ7Z5J8 1434 aa12.24□□□□□ -0.45
SMC4-210ENST00000469762 MAP3K11Q16584 847 aa12.24□□□□□ -0.45
SMC4-210ENST00000469762 MRC1P22897 1456 aa12.24□□□□□ -0.45
SMC4-210ENST00000469762 UTYO14607 1347 aa12.24□□□□□ -0.45
SMC4-210ENST00000469762 NR1I2O75469 434 aa12.24□□□□□ -0.45
SMC4-210ENST00000469762 ANO6Q4KMQ2 910 aa12.24□□□□□ -0.45
SMC4-210ENST00000469762 LEO1Q8WVC0 666 aaPredicted RBP12.24□□□□□ -0.45
SMC4-210ENST00000469762 CCDC8Q9H0W5 538 aaPredicted RBP12.24□□□□□ -0.45
SMC4-210ENST00000469762 NUP62CLQ9H1M0 184 aa12.24□□□□□ -0.45
SMC4-210ENST00000469762 ALDH8A1Q9H2A2 487 aaPredicted RBP12.24□□□□□ -0.45
SMC4-210ENST00000469762 MYH15Q9Y2K3 1946 aa12.23□□□□□ -0.45
SMC4-210ENST00000469762 RPS6KB1P23443 525 aa12.23□□□□□ -0.45
SMC4-210ENST00000469762 KRT85P78386 507 aa12.23□□□□□ -0.45
SMC4-210ENST00000469762 OS9Q13438 667 aaPredicted RBP12.23□□□□□ -0.45
SMC4-210ENST00000469762 MPRIPQ6WCQ1 1025 aa12.23□□□□□ -0.45
SMC4-210ENST00000469762 GIGYF1O75420 1035 aaPredicted RBP12.23□□□□□ -0.45
SMC4-210ENST00000469762 CCDC186Q7Z3E2 898 aa12.23□□□□□ -0.45
SMC4-210ENST00000469762 IP6K1Q92551 441 aa12.23□□□□□ -0.45
SMC4-210ENST00000469762 EDC3Q96F86 508 aaKnown RBP12.23□□□□□ -0.45
SMC4-210ENST00000469762 CCDC144BQ3MJ40 725 aa12.23□□□□□ -0.45
SMC4-210ENST00000469762 CCDC144CPQ8IYA2 1237 aa12.23□□□□□ -0.45
SMC4-210ENST00000469762 KLHDC4Q8TBB5 520 aa12.23□□□□□ -0.45
SMC4-210ENST00000469762 LRRC59Q96AG4 307 aaKnown RBP12.23□□□□□ -0.45
SMC4-210ENST00000469762 BICC1Q9H694 974 aaKnown RBP12.23□□□□□ -0.45
SMC4-210ENST00000469762 PHRF1Q9P1Y6 1649 aaKnown RBP12.23□□□□□ -0.45
SMC4-210ENST00000469762 BTBD11A6QL63 1104 aa12.22□□□□□ -0.45
SMC4-210ENST00000469762 JAK2O60674 1132 aa12.22□□□□□ -0.45
SMC4-210ENST00000469762 IFIT2P09913 472 aaKnown RBP12.22□□□□□ -0.45
SMC4-210ENST00000469762 LAMA4Q16363 1823 aa12.22□□□□□ -0.45
SMC4-210ENST00000469762 ALDH1L1O75891 902 aa12.22□□□□□ -0.45
SMC4-210ENST00000469762 TSGA10IPQ3SY00 556 aa12.22□□□□□ -0.45
SMC4-210ENST00000469762 UTP14CQ5TAP6 766 aaKnown RBP12.22□□□□□ -0.45
SMC4-210ENST00000469762 KSR2Q6VAB6 950 aa12.22□□□□□ -0.45
SMC4-210ENST00000469762 DBF4Q9UBU7 674 aaPredicted RBP12.22□□□□□ -0.45
SMC4-210ENST00000469762 KCNA6P17658 529 aa12.22□□□□□ -0.45
SMC4-210ENST00000469762 NCBP1Q09161 790 aaKnown RBP12.22□□□□□ -0.45
SMC4-210ENST00000469762 PDIA6Q15084 440 aa12.22□□□□□ -0.45
SMC4-210ENST00000469762 CLSTN2Q9H4D0 955 aa12.22□□□□□ -0.45
SMC4-210ENST00000469762 ZHX1Q9UKY1 873 aaPredicted RBP12.22□□□□□ -0.45
SMC4-210ENST00000469762 ZKSCAN1P17029 563 aaPredicted RBP12.21□□□□□ -0.45
SMC4-210ENST00000469762 ZNF75DP51815 510 aa12.21□□□□□ -0.45
SMC4-210ENST00000469762 NAA30Q147X3 362 aaPredicted RBP12.21□□□□□ -0.45
SMC4-210ENST00000469762 ZSCAN25Q6NSZ9 544 aa12.21□□□□□ -0.45
SMC4-210ENST00000469762 TDRD7Q8NHU6 1098 aaKnown RBP12.21□□□□□ -0.45
SMC4-210ENST00000469762 BOLA2Q9H3K6 86 aa12.21□□□□□ -0.45
SMC4-210ENST00000469762 IGKV5-2P06315 115 aa12.21□□□□□ -0.45
SMC4-210ENST00000469762 U2AF2P26368 475 aaKnown RBP eCLIP12.21□□□□□ -0.456e-7■■■■■ 34.1
SMC4-210ENST00000469762 ADD1P35611 737 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms