RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 FAM129BQ96TA1 746 aa7.11□□□□□ -1.27
VPS8-220ENST00000469713 ZCCHC2Q9C0B9 1178 aaKnown RBP7.11□□□□□ -1.27
VPS8-220ENST00000469713 NUCKS1Q9H1E3 243 aaKnown RBP7.11□□□□□ -1.27
VPS8-220ENST00000469713 FAM13BQ9NYF5 915 aa7.11□□□□□ -1.27
VPS8-220ENST00000469713 A6NHS1 94 aa7.1□□□□□ -1.27
VPS8-220ENST00000469713 TERTO14746 1132 aaKnown RBP7.1□□□□□ -1.27
VPS8-220ENST00000469713 GPR182O15218 404 aa7.1□□□□□ -1.27
VPS8-220ENST00000469713 IGHA2P01877 340 aa7.1□□□□□ -1.27
VPS8-220ENST00000469713 INSM1Q01101 510 aaPredicted RBP7.1□□□□□ -1.27
VPS8-220ENST00000469713 UBAP2LQ14157 1087 aaKnown RBP7.1□□□□□ -1.27
VPS8-220ENST00000469713 LBRQ14739 615 aaKnown RBP7.1□□□□□ -1.27
VPS8-220ENST00000469713 DBN1Q16643 649 aa7.1□□□□□ -1.27
VPS8-220ENST00000469713 SAMD5Q5TGI4 173 aa7.1□□□□□ -1.27
VPS8-220ENST00000469713 PIK3R5Q8WYR1 880 aa7.1□□□□□ -1.27
VPS8-220ENST00000469713 GGNBP2Q9H3C7 697 aa7.1□□□□□ -1.27
VPS8-220ENST00000469713 RTCBQ9Y3I0 505 aaKnown RBP7.1□□□□□ -1.27
VPS8-220ENST00000469713 ATXN7O15265 892 aaPredicted RBP7.09□□□□□ -1.27
VPS8-220ENST00000469713 TREHO43280 583 aa7.09□□□□□ -1.27
VPS8-220ENST00000469713 PCSK2P16519 638 aa7.09□□□□□ -1.27
VPS8-220ENST00000469713 ITGA6P23229 1130 aa7.09□□□□□ -1.27
VPS8-220ENST00000469713 USP5P45974 858 aa7.09□□□□□ -1.27
VPS8-220ENST00000469713 PDE3BQ13370 1112 aa7.09□□□□□ -1.27
VPS8-220ENST00000469713 TRIP4Q15650 581 aaPredicted RBP7.09□□□□□ -1.27
VPS8-220ENST00000469713 TRIM22Q8IYM9 498 aa7.09□□□□□ -1.27
VPS8-220ENST00000469713 CMTR1Q8N1G2 835 aaKnown RBP7.09□□□□□ -1.27
VPS8-220ENST00000469713 BRD7Q9NPI1 651 aa7.09□□□□□ -1.27
VPS8-220ENST00000469713 DCDC2BA2VCK2 349 aa7.08□□□□□ -1.28
VPS8-220ENST00000469713 H7C1W4 665 aa7.08□□□□□ -1.28
VPS8-220ENST00000469713 FAM157BP0CG42 384 aa7.08□□□□□ -1.28
VPS8-220ENST00000469713 DSC3Q14574 896 aa7.08□□□□□ -1.28
VPS8-220ENST00000469713 C8orf34Q49A92 452 aa7.08□□□□□ -1.28
VPS8-220ENST00000469713 FIGNL1Q6PIW4 674 aa7.08□□□□□ -1.28
VPS8-220ENST00000469713 NPM2Q86SE8 214 aaKnown RBP7.08□□□□□ -1.28
VPS8-220ENST00000469713 ZNF837Q96EG3 531 aaPredicted RBP7.08□□□□□ -1.28
VPS8-220ENST00000469713 DMRTB1Q96MA1 342 aa7.08□□□□□ -1.28
VPS8-220ENST00000469713 BCL2L13Q9BXK5 485 aa7.08□□□□□ -1.28
VPS8-220ENST00000469713 AMOTL2Q9Y2J4 779 aa7.08□□□□□ -1.28
VPS8-220ENST00000469713 PCDHGC4Q9Y5F7 938 aa7.08□□□□□ -1.28
VPS8-220ENST00000469713 KCNMB2Q9Y691 235 aa7.08□□□□□ -1.28
VPS8-220ENST00000469713 KHNYNO15037 678 aaKnown RBP7.07□□□□□ -1.28
VPS8-220ENST00000469713 PPFIA3O75145 1194 aa7.07□□□□□ -1.28
VPS8-220ENST00000469713 P4HBP07237 508 aaKnown RBP7.07□□□□□ -1.28
VPS8-220ENST00000469713 EPB42P16452 691 aa7.07□□□□□ -1.28
VPS8-220ENST00000469713 RBM25P49756 843 aaKnown RBP7.07□□□□□ -1.28
VPS8-220ENST00000469713 SFSWAPQ12872 951 aaKnown RBP7.07□□□□□ -1.28
VPS8-220ENST00000469713 NIF3L1Q9GZT8 377 aa7.07□□□□□ -1.28
VPS8-220ENST00000469713 UBAP1LF5GYI3 381 aa7.06□□□□□ -1.28
VPS8-220ENST00000469713 EFSO43281 561 aa7.06□□□□□ -1.28
VPS8-220ENST00000469713 BNIP3LO60238 219 aa7.06□□□□□ -1.28
VPS8-220ENST00000469713 RPLP1P05386 114 aaKnown RBP7.06□□□□□ -1.28
VPS8-220ENST00000469713 PLCB3Q01970 1234 aa7.06□□□□□ -1.28
VPS8-220ENST00000469713 TAGLNQ01995 201 aaKnown RBP7.06□□□□□ -1.28
VPS8-220ENST00000469713 TNP2Q05952 138 aa7.06□□□□□ -1.28
VPS8-220ENST00000469713 FMR1Q06787 632 aaKnown RBP eCLIP7.06□□□□□ -1.28
VPS8-220ENST00000469713 EHHADHQ08426 723 aa7.06□□□□□ -1.28
VPS8-220ENST00000469713 FBXO33Q7Z6M2 555 aa7.06□□□□□ -1.28
VPS8-220ENST00000469713 TTC16Q8NEE8 873 aa7.06□□□□□ -1.28
VPS8-220ENST00000469713 GIPC2Q8TF65 315 aa7.06□□□□□ -1.28
VPS8-220ENST00000469713 GTPBP3Q969Y2 492 aaKnown RBP7.06□□□□□ -1.28
VPS8-220ENST00000469713 ABHD17AQ96GS6 310 aa7.06□□□□□ -1.28
VPS8-220ENST00000469713 STRN4Q9NRL3 753 aa7.06□□□□□ -1.28
VPS8-220ENST00000469713 NDFIP2Q9NV92 336 aa7.06□□□□□ -1.28
VPS8-220ENST00000469713 HCN2Q9UL51 889 aa7.06□□□□□ -1.28
VPS8-220ENST00000469713 KCNH4Q9UQ05 1017 aa7.06□□□□□ -1.28
VPS8-220ENST00000469713 RBM47A0AV96 593 aaKnown RBP7.05□□□□□ -1.28
VPS8-220ENST00000469713 XYLBO75191 536 aa7.05□□□□□ -1.28
VPS8-220ENST00000469713 MAPTP10636 758 aaKnown RBP7.05□□□□□ -1.28
VPS8-220ENST00000469713 KCNQ4P56696 695 aa7.05□□□□□ -1.28
VPS8-220ENST00000469713 GRIN2CQ14957 1233 aa7.05□□□□□ -1.28
VPS8-220ENST00000469713 COL19A1Q14993 1142 aa7.05□□□□□ -1.28
VPS8-220ENST00000469713 ALKBH8Q96BT7 664 aaKnown RBP7.05□□□□□ -1.28
VPS8-220ENST00000469713 CDC14CA4D256 554 aa7.04□□□□□ -1.28
VPS8-220ENST00000469713 ZNF16P17020 682 aaPredicted RBP7.04□□□□□ -1.28
VPS8-220ENST00000469713 LORP23490 312 aaPredicted RBP7.04□□□□□ -1.28
VPS8-220ENST00000469713 MAPK8P45983 427 aa7.04□□□□□ -1.28
VPS8-220ENST00000469713 ORC1Q13415 861 aa7.04□□□□□ -1.28
VPS8-220ENST00000469713 EAPPQ56P03 285 aaPredicted RBP7.04□□□□□ -1.28
VPS8-220ENST00000469713 VWA5B2Q8N398 1253 aa7.04□□□□□ -1.28
VPS8-220ENST00000469713 GMCL1Q96IK5 515 aa7.04□□□□□ -1.28
VPS8-220ENST00000469713 FNDC3AQ9Y2H6 1198 aaKnown RBP7.04□□□□□ -1.28
VPS8-220ENST00000469713 GPR25O00155 361 aa7.03□□□□□ -1.28
VPS8-220ENST00000469713 CD33P20138 364 aa7.03□□□□□ -1.28
VPS8-220ENST00000469713 ZNF438Q7Z4V0 828 aa7.03□□□□□ -1.28
VPS8-220ENST00000469713 TMEM63CQ9P1W3 806 aa7.03□□□□□ -1.28
VPS8-220ENST00000469713 FOXD3Q9UJU5 478 aaPredicted RBP7.03□□□□□ -1.28
VPS8-220ENST00000469713 PNMA6FA0A0J9YX94 578 aa7.02□□□□□ -1.29
VPS8-220ENST00000469713 UNCXA6NJT0 531 aa7.02□□□□□ -1.29
VPS8-220ENST00000469713 TNFRSF21O75509 655 aa7.02□□□□□ -1.29
VPS8-220ENST00000469713 SASH3O75995 380 aa7.02□□□□□ -1.29
VPS8-220ENST00000469713 EGFRP00533 1210 aa7.02□□□□□ -1.29
VPS8-220ENST00000469713 VEGFBP49765 207 aa7.02□□□□□ -1.29
VPS8-220ENST00000469713 LAMC2Q13753 1193 aa7.02□□□□□ -1.29
VPS8-220ENST00000469713 PDE12Q6L8Q7 609 aaKnown RBP7.02□□□□□ -1.29
VPS8-220ENST00000469713 XKR5Q6UX68 686 aa7.02□□□□□ -1.29
VPS8-220ENST00000469713 KRT25Q7Z3Z0 450 aa7.02□□□□□ -1.29
VPS8-220ENST00000469713 NPAS3Q8IXF0 933 aa7.02□□□□□ -1.29
VPS8-220ENST00000469713 SETDB2Q96T68 719 aa7.02□□□□□ -1.29
VPS8-220ENST00000469713 GSX2Q9BZM3 304 aa7.02□□□□□ -1.29
VPS8-220ENST00000469713 ELP3Q9H9T3 547 aa7.02□□□□□ -1.29
VPS8-220ENST00000469713 MARK1Q9P0L2 795 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms