RNA–Protein interactions for RNA: ENST00000469704.1

SNX5-206, Transcript of sorting nexin 5, humanhuman

TSL 3

Gene SNX5, Length 696 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-206ENST00000469704 ELL2O00472 640 aaPredicted RBP34.47■■■■□ 3.11
SNX5-206ENST00000469704 CCDC88AQ3V6T2 1871 aa34.47■■■■□ 3.11
SNX5-206ENST00000469704 ABCC12Q96J65 1359 aa34.47■■■■□ 3.11
SNX5-206ENST00000469704 ANKRD36CQ5JPF3 1778 aa34.46■■■■□ 3.11
SNX5-206ENST00000469704 SLC10A5Q5PT55 438 aa34.46■■■■□ 3.11
SNX5-206ENST00000469704 LTBP3Q9NS15 1303 aa34.46■■■■□ 3.11
SNX5-206ENST00000469704 PRELPP51888 382 aa34.45■■■■□ 3.11
SNX5-206ENST00000469704 NLRP10Q86W26 655 aa34.45■■■■□ 3.11
SNX5-206ENST00000469704 HOXA10P31260 410 aaPredicted RBP34.44■■■■□ 3.1
SNX5-206ENST00000469704 CCDC30Q5VVM6 783 aa34.43■■■■□ 3.1
SNX5-206ENST00000469704 KDM2BQ8NHM5 1336 aa34.42■■■■□ 3.1
SNX5-206ENST00000469704 KIF3CO14782 793 aa34.42■■■■□ 3.1
SNX5-206ENST00000469704 WDR63Q8IWG1 891 aa34.42■■■■□ 3.1
SNX5-206ENST00000469704 NLRP3Q96P20 1036 aa34.42■■■■□ 3.1
SNX5-206ENST00000469704 TAOK3Q9H2K8 898 aa34.42■■■■□ 3.1
SNX5-206ENST00000469704 TNRC6CQ9HCJ0 1690 aaKnown RBP34.41■■■■□ 3.1
SNX5-206ENST00000469704 SENP3-EIF4A1A0A087X0R7 540 aa34.41■■■■□ 3.1
SNX5-206ENST00000469704 CCDC93Q567U6 631 aa34.41■■■■□ 3.1
SNX5-206ENST00000469704 FAM9BQ8IZU0 186 aa34.41■■■■□ 3.1
SNX5-206ENST00000469704 RPGRQ92834 1020 aaKnown RBP34.41■■■■□ 3.1
SNX5-206ENST00000469704 TSR2Q969E8 191 aaKnown RBP34.4■■■■□ 3.1
SNX5-206ENST00000469704 CRAMP1Q96RY5 1269 aa34.39■■■■□ 3.1
SNX5-206ENST00000469704 DICER1Q9UPY3 1922 aaKnown RBP34.39■■■■□ 3.1
SNX5-206ENST00000469704 RTKN2Q8IZC4 609 aa34.38■■■■□ 3.09
SNX5-206ENST00000469704 TSPYL6Q8N831 410 aa34.38■■■■□ 3.09
SNX5-206ENST00000469704 RBM17Q96I25 401 aaKnown RBP34.38■■■■□ 3.09
SNX5-206ENST00000469704 ISCA1Q9BUE6 129 aa34.38■■■■□ 3.09
SNX5-206ENST00000469704 TRMT112Q9UI30 125 aaKnown RBP34.38■■■■□ 3.09
SNX5-206ENST00000469704 TRIM28Q13263 835 aaKnown RBP34.37■■■■□ 3.09
SNX5-206ENST00000469704 PHAXQ9H814 394 aaKnown RBP34.37■■■■□ 3.09
SNX5-206ENST00000469704 CC2D2BQ6DHV5 1058 aa34.36■■■■□ 3.09
SNX5-206ENST00000469704 SH3TC1Q8TE82 1336 aa34.35■■■■□ 3.09
SNX5-206ENST00000469704 GOLGA2Q08379 1002 aa34.35■■■■□ 3.09
SNX5-206ENST00000469704 RIC3Q7Z5B4 369 aa34.35■■■■□ 3.09
SNX5-206ENST00000469704 NMRK2Q9NPI5 230 aa34.35■■■■□ 3.09
SNX5-206ENST00000469704 GLTPD2A6NH11 291 aa34.34■■■■□ 3.09
SNX5-206ENST00000469704 SALL2Q9Y467 1007 aaPredicted RBP34.34■■■■□ 3.09
SNX5-206ENST00000469704 FKBP4Q02790 459 aaKnown RBP eCLIP34.33■■■■□ 3.09
SNX5-206ENST00000469704 TWISTNBQ3B726 338 aaPredicted RBP34.33■■■■□ 3.09
SNX5-206ENST00000469704 GRIPAP1Q4V328 841 aa34.33■■■■□ 3.09
SNX5-206ENST00000469704 C3orf67Q6ZVT6 689 aa34.32■■■■□ 3.08
SNX5-206ENST00000469704 TOMM70O94826 608 aa34.31■■■■□ 3.08
SNX5-206ENST00000469704 DDX58O95786 925 aaKnown RBP34.31■■■■□ 3.08
SNX5-206ENST00000469704 DPY19L2Q6NUT2 758 aa34.31■■■■□ 3.08
SNX5-206ENST00000469704 STK31Q9BXU1 1019 aa34.3■■■■□ 3.08
SNX5-206ENST00000469704 TIAM2Q8IVF5 1701 aa34.3■■■■□ 3.08
SNX5-206ENST00000469704 ATP5J2-PTCD1G3V325 749 aa34.29■■■■□ 3.08
SNX5-206ENST00000469704 HCLS1P14317 486 aaPredicted RBP34.29■■■■□ 3.08
SNX5-206ENST00000469704 OLFM4Q6UX06 510 aa34.29■■■■□ 3.08
SNX5-206ENST00000469704 SYNE4Q8N205 404 aa34.29■■■■□ 3.08
SNX5-206ENST00000469704 RRAGCQ9HB90 399 aa34.29■■■■□ 3.08
SNX5-206ENST00000469704 FANCIQ9NVI1 1328 aa34.28■■■■□ 3.08
SNX5-206ENST00000469704 PSMD1Q99460 953 aa34.27■■■■□ 3.08
SNX5-206ENST00000469704 BBOX1O75936 387 aa34.25■■■■□ 3.07
SNX5-206ENST00000469704 C16orf71Q8IYS4 520 aaPredicted RBP34.25■■■■□ 3.07
SNX5-206ENST00000469704 FAM89AQ96GI7 184 aa34.25■■■■□ 3.07
SNX5-206ENST00000469704 LAMB2P55268 1798 aa34.24■■■■□ 3.07
SNX5-206ENST00000469704 SNED1Q8TER0 1413 aa34.24■■■■□ 3.07
SNX5-206ENST00000469704 PPEF1O14829 653 aaPredicted RBP34.24■■■■□ 3.07
SNX5-206ENST00000469704 CCDC191Q8NCU4 936 aa34.24■■■■□ 3.07
SNX5-206ENST00000469704 METTL22Q9BUU2 404 aaPredicted RBP34.24■■■■□ 3.07
SNX5-206ENST00000469704 TMX4Q9H1E5 349 aaPredicted RBP34.24■■■■□ 3.07
SNX5-206ENST00000469704 KSR2Q6VAB6 950 aa34.23■■■■□ 3.07
SNX5-206ENST00000469704 ZNF277Q9NRM2 450 aaPredicted RBP34.23■■■■□ 3.07
SNX5-206ENST00000469704 CACNA1FO60840 1977 aa34.23■■■■□ 3.07
SNX5-206ENST00000469704 SLC4A2P04920 1241 aa34.22■■■■□ 3.07
SNX5-206ENST00000469704 VEGFAP15692 232 aaPredicted RBP34.22■■■■□ 3.07
SNX5-206ENST00000469704 DDX46Q7L014 1031 aaKnown RBP34.22■■■■□ 3.07
SNX5-206ENST00000469704 MYD88Q99836 296 aa34.22■■■■□ 3.07
SNX5-206ENST00000469704 MYH16Q9H6N6 1097 aa34.22■■■■□ 3.07
SNX5-206ENST00000469704 ABCC4O15439 1325 aa34.22■■■■□ 3.07
SNX5-206ENST00000469704 VAMP4O75379 141 aa34.21■■■■□ 3.07
SNX5-206ENST00000469704 HSP90B1P14625 803 aaKnown RBP34.21■■■■□ 3.07
SNX5-206ENST00000469704 ZBTB38Q8NAP3 1195 aaPredicted RBP34.21■■■■□ 3.07
SNX5-206ENST00000469704 RBM46Q8TBY0 533 aaKnown RBP34.21■■■■□ 3.07
SNX5-206ENST00000469704 ATP6V0A2Q9Y487 856 aa34.21■■■■□ 3.07
SNX5-206ENST00000469704 IARSP41252 1262 aaKnown RBP34.2■■■■□ 3.07
SNX5-206ENST00000469704 SF3B3Q15393 1217 aaKnown RBP34.2■■■■□ 3.07
SNX5-206ENST00000469704 DDX60Q8IY21 1712 aaKnown RBP34.19■■■■□ 3.06
SNX5-206ENST00000469704 PI4KAP2A4QPH2 592 aa34.19■■■■□ 3.06
SNX5-206ENST00000469704 EXOSC9Q06265 439 aaKnown RBP34.19■■■■□ 3.06
SNX5-206ENST00000469704 PI4KAP1Q8N8J0 262 aa34.19■■■■□ 3.06
SNX5-206ENST00000469704 SPINK5Q9NQ38 1064 aaPredicted RBP34.19■■■■□ 3.06
SNX5-206ENST00000469704 MAP3K2Q9Y2U5 619 aa34.19■■■■□ 3.06
SNX5-206ENST00000469704 TCERG1O14776 1098 aaKnown RBP34.18■■■■□ 3.06
SNX5-206ENST00000469704 SP8Q8IXZ3 490 aa34.18■■■■□ 3.06
SNX5-206ENST00000469704 ZNF428Q96B54 188 aa34.18■■■■□ 3.06
SNX5-206ENST00000469704 IRS4O14654 1257 aaPredicted RBP34.17■■■■□ 3.06
SNX5-206ENST00000469704 HSPA6P17066 643 aa34.17■■■■□ 3.06
SNX5-206ENST00000469704 GRAPQ13588 217 aa34.17■■■■□ 3.06
SNX5-206ENST00000469704 TMC4Q7Z404 712 aa34.17■■■■□ 3.06
SNX5-206ENST00000469704 GRAPLQ8TC17 118 aaPredicted RBP34.17■■■■□ 3.06
SNX5-206ENST00000469704 CWC25Q9NXE8 425 aaPredicted RBP34.17■■■■□ 3.06
SNX5-206ENST00000469704 WDR90Q96KV7 1748 aa34.16■■■■□ 3.06
SNX5-206ENST00000469704 PCCAP05165 728 aaPredicted RBP34.16■■■■□ 3.06
SNX5-206ENST00000469704 ZNF521Q96K83 1311 aa34.15■■■■□ 3.06
SNX5-206ENST00000469704 CCER2I3L3R5 266 aa34.15■■■■□ 3.06
SNX5-206ENST00000469704 VPS33BQ9H267 617 aa34.15■■■■□ 3.06
SNX5-206ENST00000469704 NEXNQ0ZGT2 675 aa34.14■■■■□ 3.06
SNX5-206ENST00000469704 FSTL1Q12841 308 aa34.14■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms