RNA–Protein interactions for RNA: ENST00000469653.5

SEMA4D-215, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 3,533 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-215ENST00000469653 HSP90AA2PQ14568 343 aaPredicted RBP12.24□□□□□ -0.45
SEMA4D-215ENST00000469653 HSCBQ8IWL3 235 aa12.24□□□□□ -0.45
SEMA4D-215ENST00000469653 DDX11L8A8MPP1 907 aa12.23□□□□□ -0.45
SEMA4D-215ENST00000469653 TRIM27P14373 513 aa12.23□□□□□ -0.45
SEMA4D-215ENST00000469653 CRKLP46109 303 aaKnown RBP12.23□□□□□ -0.45
SEMA4D-215ENST00000469653 PIP4K2AP48426 406 aaPredicted RBP12.23□□□□□ -0.45
SEMA4D-215ENST00000469653 HDAC1Q13547 482 aaPredicted RBP12.23□□□□□ -0.45
SEMA4D-215ENST00000469653 TRIM44Q96DX7 344 aaPredicted RBP12.23□□□□□ -0.45
SEMA4D-215ENST00000469653 CT47B1P0C2W7 299 aaPredicted RBP12.23□□□□□ -0.45
SEMA4D-215ENST00000469653 CCDC30Q5VVM6 783 aa12.23□□□□□ -0.45
SEMA4D-215ENST00000469653 TNPO1Q92973 898 aaKnown RBP12.23□□□□□ -0.45
SEMA4D-215ENST00000469653 NUP188Q5SRE5 1749 aa12.23□□□□□ -0.45
SEMA4D-215ENST00000469653 LNPKQ9C0E8 428 aa12.22□□□□□ -0.45
SEMA4D-215ENST00000469653 RNF216Q9NWF9 866 aaPredicted RBP12.22□□□□□ -0.45
SEMA4D-215ENST00000469653 CHPF2Q9P2E5 772 aa12.22□□□□□ -0.45
SEMA4D-215ENST00000469653 CACNA1FO60840 1977 aa12.22□□□□□ -0.45
SEMA4D-215ENST00000469653 APPP05067 770 aa12.22□□□□□ -0.45
SEMA4D-215ENST00000469653 INTS5Q6P9B9 1019 aaKnown RBP12.22□□□□□ -0.45
SEMA4D-215ENST00000469653 SMC5Q8IY18 1101 aa12.22□□□□□ -0.45
SEMA4D-215ENST00000469653 CCDC87Q9NVE4 849 aa12.22□□□□□ -0.45
SEMA4D-215ENST00000469653 RRP9O43818 475 aaKnown RBP12.21□□□□□ -0.45
SEMA4D-215ENST00000469653 PTMAP06454 111 aaKnown RBP12.21□□□□□ -0.45
SEMA4D-215ENST00000469653 GPATCH11Q8N954 259 aa12.21□□□□□ -0.45
SEMA4D-215ENST00000469653 ZBTB1Q9Y2K1 713 aa12.21□□□□□ -0.45
SEMA4D-215ENST00000469653 DTNBO60941 627 aa12.21□□□□□ -0.45
SEMA4D-215ENST00000469653 ANXA1P04083 346 aa12.21□□□□□ -0.45
SEMA4D-215ENST00000469653 MYL6BP14649 208 aa12.21□□□□□ -0.45
SEMA4D-215ENST00000469653 CNTNAP4Q9C0A0 1308 aa12.21□□□□□ -0.45
SEMA4D-215ENST00000469653 NBPF26B4DH59 902 aa12.21□□□□□ -0.46
SEMA4D-215ENST00000469653 PROSER3Q2NL68 480 aa12.21□□□□□ -0.46
SEMA4D-215ENST00000469653 RC3H1Q5TC82 1133 aaKnown RBP12.21□□□□□ -0.46
SEMA4D-215ENST00000469653 NBPF14Q5TI25 921 aa12.21□□□□□ -0.46
SEMA4D-215ENST00000469653 NBPF10Q6P3W6 841 aaKnown RBP12.21□□□□□ -0.46
SEMA4D-215ENST00000469653 NBPF15Q8N660 670 aa12.21□□□□□ -0.46
SEMA4D-215ENST00000469653 SSH1Q8WYL5 1049 aa12.21□□□□□ -0.46
SEMA4D-215ENST00000469653 STK31Q9BXU1 1019 aa12.21□□□□□ -0.46
SEMA4D-215ENST00000469653 HMGB2P26583 209 aaKnown RBP12.2□□□□□ -0.46
SEMA4D-215ENST00000469653 PDIA6Q15084 440 aa12.2□□□□□ -0.46
SEMA4D-215ENST00000469653 AK7Q96M32 723 aa12.2□□□□□ -0.46
SEMA4D-215ENST00000469653 DBF4Q9UBU7 674 aaPredicted RBP12.2□□□□□ -0.46
SEMA4D-215ENST00000469653 SLC4A2P04920 1241 aa12.2□□□□□ -0.46
SEMA4D-215ENST00000469653 SNX21Q969T3 373 aa12.2□□□□□ -0.46
SEMA4D-215ENST00000469653 ZNF330Q9Y3S2 320 aaPredicted RBP12.2□□□□□ -0.46
SEMA4D-215ENST00000469653 UBR3Q6ZT12 1888 aa12.2□□□□□ -0.46
SEMA4D-215ENST00000469653 GNPATO15228 680 aa12.2□□□□□ -0.46
SEMA4D-215ENST00000469653 KIF2CQ99661 725 aa12.2□□□□□ -0.46
SEMA4D-215ENST00000469653 DDX21Q9NR30 783 aaKnown RBP eCLIP12.2□□□□□ -0.46
SEMA4D-215ENST00000469653 CD2BP2O95400 341 aaKnown RBP12.19□□□□□ -0.46
SEMA4D-215ENST00000469653 ISY1Q9ULR0 285 aaKnown RBP12.19□□□□□ -0.46
SEMA4D-215ENST00000469653 ZNF827Q17R98 1081 aa12.19□□□□□ -0.46
SEMA4D-215ENST00000469653 ALDH1L2Q3SY69 923 aa12.19□□□□□ -0.46
SEMA4D-215ENST00000469653 SMIM5Q71RC9 77 aa12.19□□□□□ -0.46
SEMA4D-215ENST00000469653 TUBGCP6Q96RT7 1819 aa12.19□□□□□ -0.46
SEMA4D-215ENST00000469653 RAB3GAP1Q15042 981 aa12.19□□□□□ -0.46
SEMA4D-215ENST00000469653 TMEM57Q8N5G2 664 aa12.19□□□□□ -0.46
SEMA4D-215ENST00000469653 AKT1S1Q96B36 256 aa12.19□□□□□ -0.46
SEMA4D-215ENST00000469653 CHAMP1Q96JM3 812 aa12.19□□□□□ -0.46
SEMA4D-215ENST00000469653 ATF7IPQ6VMQ6 1270 aa12.18□□□□□ -0.46
SEMA4D-215ENST00000469653 ZBTB40Q9NUA8 1239 aa12.18□□□□□ -0.46
SEMA4D-215ENST00000469653 HYPKQ9NX55 129 aa12.18□□□□□ -0.46
SEMA4D-215ENST00000469653 NOB1Q9ULX3 412 aaKnown RBP12.18□□□□□ -0.46
SEMA4D-215ENST00000469653 DDX19BQ9UMR2 479 aa12.18□□□□□ -0.46
SEMA4D-215ENST00000469653 NPM3O75607 178 aaKnown RBP12.18□□□□□ -0.46
SEMA4D-215ENST00000469653 MRPL50Q8N5N7 158 aaKnown RBP12.18□□□□□ -0.46
SEMA4D-215ENST00000469653 TFCP2L1Q9NZI6 479 aa12.18□□□□□ -0.46
SEMA4D-215ENST00000469653 RTCBQ9Y3I0 505 aaKnown RBP12.18□□□□□ -0.46
SEMA4D-215ENST00000469653 RPS6KA4O75676 772 aa12.17□□□□□ -0.46
SEMA4D-215ENST00000469653 IL6STP40189 918 aaPredicted RBP12.17□□□□□ -0.46
SEMA4D-215ENST00000469653 AMIGO3Q86WK7 504 aa12.17□□□□□ -0.46
SEMA4D-215ENST00000469653 PHAXQ9H814 394 aaKnown RBP12.17□□□□□ -0.46
SEMA4D-215ENST00000469653 PHF14O94880 888 aa12.17□□□□□ -0.46
SEMA4D-215ENST00000469653 G2E3Q7L622 706 aa12.17□□□□□ -0.46
SEMA4D-215ENST00000469653 LRP10Q7Z4F1 713 aa12.17□□□□□ -0.46
SEMA4D-215ENST00000469653 STK32BQ9NY57 414 aa12.17□□□□□ -0.46
SEMA4D-215ENST00000469653 EIF5P55010 431 aaKnown RBP12.17□□□□□ -0.46
SEMA4D-215ENST00000469653 NUCB1Q02818 461 aa12.17□□□□□ -0.46
SEMA4D-215ENST00000469653 AIMP1Q12904 312 aaKnown RBP12.17□□□□□ -0.46
SEMA4D-215ENST00000469653 SLC15A2Q16348 729 aa12.16□□□□□ -0.46
SEMA4D-215ENST00000469653 COPS6Q7L5N1 327 aa12.16□□□□□ -0.46
SEMA4D-215ENST00000469653 XAGE3Q8WTP9 111 aa12.16□□□□□ -0.46
SEMA4D-215ENST00000469653 COL15A1P39059 1388 aa12.16□□□□□ -0.46
SEMA4D-215ENST00000469653 CIZ1Q9ULV3 898 aaPredicted RBP12.16□□□□□ -0.46
SEMA4D-215ENST00000469653 TRAPPC3LQ5T215 181 aa12.15□□□□□ -0.46
SEMA4D-215ENST00000469653 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.15□□□□□ -0.46
SEMA4D-215ENST00000469653 FLIIQ13045 1269 aa12.15□□□□□ -0.46
SEMA4D-215ENST00000469653 C4AP0C0L4 1744 aa12.15□□□□□ -0.46
SEMA4D-215ENST00000469653 SSFA2P28290 1259 aa12.15□□□□□ -0.47
SEMA4D-215ENST00000469653 TTLL7Q6ZT98 887 aa12.15□□□□□ -0.47
SEMA4D-215ENST00000469653 ARHGEF1Q92888 912 aaKnown RBP12.15□□□□□ -0.47
SEMA4D-215ENST00000469653 GBP4Q96PP9 640 aa12.15□□□□□ -0.47
SEMA4D-215ENST00000469653 TBC1D2BQ9UPU7 963 aa12.15□□□□□ -0.47
SEMA4D-215ENST00000469653 SOCS7O14512 581 aa12.14□□□□□ -0.47
SEMA4D-215ENST00000469653 FAM13BQ9NYF5 915 aa12.14□□□□□ -0.47
SEMA4D-215ENST00000469653 QSER1Q2KHR3 1735 aa12.14□□□□□ -0.47
SEMA4D-215ENST00000469653 BRPF1P55201 1214 aaPredicted RBP12.14□□□□□ -0.47
SEMA4D-215ENST00000469653 DZIP3Q86Y13 1208 aaKnown RBP12.14□□□□□ -0.47
SEMA4D-215ENST00000469653 A0A087WZG4 1122 aa12.14□□□□□ -0.47
SEMA4D-215ENST00000469653 CHD1LQ86WJ1 897 aa12.14□□□□□ -0.47
SEMA4D-215ENST00000469653 RFC4P35249 363 aa12.13□□□□□ -0.47
SEMA4D-215ENST00000469653 FKBP5Q13451 457 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms