RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 ANKRD13DQ6ZTN6 518 aa10.34□□□□□ -0.75
NPHP3-204ENST00000469232 FTSJ3Q8IY81 847 aaKnown RBP10.34□□□□□ -0.75
NPHP3-204ENST00000469232 CLUAP1Q96AJ1 413 aa10.34□□□□□ -0.75
NPHP3-204ENST00000469232 METTL22Q9BUU2 404 aaPredicted RBP10.34□□□□□ -0.75
NPHP3-204ENST00000469232 COG6Q9Y2V7 657 aa10.34□□□□□ -0.75
NPHP3-204ENST00000469232 UTYO14607 1347 aa10.34□□□□□ -0.75
NPHP3-204ENST00000469232 F6X3S4 739 aa10.33□□□□□ -0.76
NPHP3-204ENST00000469232 TXNRD1Q16881 649 aa10.33□□□□□ -0.76
NPHP3-204ENST00000469232 TTLL7Q6ZT98 887 aa10.33□□□□□ -0.76
NPHP3-204ENST00000469232 LINS1Q8NG48 757 aa10.33□□□□□ -0.76
NPHP3-204ENST00000469232 COL15A1P39059 1388 aa10.33□□□□□ -0.76
NPHP3-204ENST00000469232 UBR3Q6ZT12 1888 aa10.33□□□□□ -0.76
NPHP3-204ENST00000469232 MAP3K15Q6ZN16 1313 aa10.33□□□□□ -0.76
NPHP3-204ENST00000469232 IGKV5-2P06315 115 aa10.33□□□□□ -0.76
NPHP3-204ENST00000469232 MYL6BP14649 208 aa10.33□□□□□ -0.76
NPHP3-204ENST00000469232 IRX6P78412 446 aaPredicted RBP10.33□□□□□ -0.76
NPHP3-204ENST00000469232 CCDC125Q86Z20 511 aa10.33□□□□□ -0.76
NPHP3-204ENST00000469232 CAMKK2Q96RR4 588 aa10.33□□□□□ -0.76
NPHP3-204ENST00000469232 ISCA1Q9BUE6 129 aa10.33□□□□□ -0.76
NPHP3-204ENST00000469232 CHMP4BQ9H444 224 aaKnown RBP10.33□□□□□ -0.76
NPHP3-204ENST00000469232 MAP3K2Q9Y2U5 619 aa10.33□□□□□ -0.76
NPHP3-204ENST00000469232 BCORQ6W2J9 1755 aa10.33□□□□□ -0.76
NPHP3-204ENST00000469232 PIP4K2AP48426 406 aaPredicted RBP10.32□□□□□ -0.76
NPHP3-204ENST00000469232 PSEN1P49768 467 aa10.32□□□□□ -0.76
NPHP3-204ENST00000469232 PPP4R2Q9NY27 417 aa10.32□□□□□ -0.76
NPHP3-204ENST00000469232 COLQQ9Y215 455 aaPredicted RBP10.32□□□□□ -0.76
NPHP3-204ENST00000469232 SCN7AQ01118 1682 aa10.31□□□□□ -0.76
NPHP3-204ENST00000469232 A0A087WZG4 1122 aa10.31□□□□□ -0.76
NPHP3-204ENST00000469232 CAMTA2O94983 1202 aa10.31□□□□□ -0.76
NPHP3-204ENST00000469232 APBA3O96018 575 aa10.31□□□□□ -0.76
NPHP3-204ENST00000469232 GIGYF2Q6Y7W6 1299 aaKnown RBP10.31□□□□□ -0.76
NPHP3-204ENST00000469232 SRCIN1Q9C0H9 1055 aa10.31□□□□□ -0.76
NPHP3-204ENST00000469232 USP44Q9H0E7 712 aa10.31□□□□□ -0.76
NPHP3-204ENST00000469232 ANKRD36CQ5JPF3 1778 aa10.3□□□□□ -0.76
NPHP3-204ENST00000469232 NEURL1BA8MQ27 555 aa10.3□□□□□ -0.76
NPHP3-204ENST00000469232 SEC24BO95487 1268 aa10.3□□□□□ -0.76
NPHP3-204ENST00000469232 PDAP1Q13442 181 aaKnown RBP10.3□□□□□ -0.76
NPHP3-204ENST00000469232 TCIRG1Q13488 830 aa10.3□□□□□ -0.76
NPHP3-204ENST00000469232 CLEC4GQ6UXB4 293 aa10.3□□□□□ -0.76
NPHP3-204ENST00000469232 ITPRIPQ8IWB1 547 aa10.3□□□□□ -0.76
NPHP3-204ENST00000469232 QSER1Q2KHR3 1735 aa10.3□□□□□ -0.76
NPHP3-204ENST00000469232 NUP98P52948 1817 aa10.29□□□□□ -0.76
NPHP3-204ENST00000469232 POTEJP0CG39 1038 aa10.29□□□□□ -0.76
NPHP3-204ENST00000469232 CASP7P55210 303 aa10.29□□□□□ -0.76
NPHP3-204ENST00000469232 KCNQ4P56696 695 aa10.29□□□□□ -0.76
NPHP3-204ENST00000469232 AIMP1Q12904 312 aaKnown RBP10.29□□□□□ -0.76
NPHP3-204ENST00000469232 RIC3Q7Z5B4 369 aa10.29□□□□□ -0.76
NPHP3-204ENST00000469232 AMIGO3Q86WK7 504 aa10.29□□□□□ -0.76
NPHP3-204ENST00000469232 ZNF34Q8IZ26 560 aa10.29□□□□□ -0.76
NPHP3-204ENST00000469232 C4AP0C0L4 1744 aa10.29□□□□□ -0.76
NPHP3-204ENST00000469232 GNAI3P08754 354 aa10.29□□□□□ -0.76
NPHP3-204ENST00000469232 SSFA2P28290 1259 aa10.29□□□□□ -0.76
NPHP3-204ENST00000469232 HSP90AB3PQ58FF7 597 aa10.29□□□□□ -0.76
NPHP3-204ENST00000469232 KIF6Q6ZMV9 814 aa10.29□□□□□ -0.76
NPHP3-204ENST00000469232 DZIP3Q86Y13 1208 aaKnown RBP10.29□□□□□ -0.76
NPHP3-204ENST00000469232 CCDC191Q8NCU4 936 aa10.29□□□□□ -0.76
NPHP3-204ENST00000469232 OTUD5Q96G74 571 aa10.29□□□□□ -0.76
NPHP3-204ENST00000469232 MEIS3Q99687 375 aa10.29□□□□□ -0.76
NPHP3-204ENST00000469232 NARFQ9UHQ1 456 aa10.29□□□□□ -0.76
NPHP3-204ENST00000469232 PCDHB15Q9Y5E8 787 aa10.29□□□□□ -0.76
NPHP3-204ENST00000469232 H7C1W4 665 aa10.28□□□□□ -0.76
NPHP3-204ENST00000469232 NEXNQ0ZGT2 675 aa10.28□□□□□ -0.76
NPHP3-204ENST00000469232 GCKRQ14397 625 aa10.28□□□□□ -0.76
NPHP3-204ENST00000469232 HLFQ16534 295 aa10.28□□□□□ -0.76
NPHP3-204ENST00000469232 SLC4A10Q6U841 1118 aa10.28□□□□□ -0.76
NPHP3-204ENST00000469232 BCL2L12Q9HB09 334 aa10.28□□□□□ -0.76
NPHP3-204ENST00000469232 RTCBQ9Y3I0 505 aaKnown RBP10.28□□□□□ -0.76
NPHP3-204ENST00000469232 KDM2BQ8NHM5 1336 aa10.28□□□□□ -0.76
NPHP3-204ENST00000469232 GRM8O00222 908 aa10.27□□□□□ -0.77
NPHP3-204ENST00000469232 GNPATO15228 680 aa10.27□□□□□ -0.77
NPHP3-204ENST00000469232 MTX1Q13505 466 aa10.27□□□□□ -0.77
NPHP3-204ENST00000469232 HDAC1Q13547 482 aaPredicted RBP10.27□□□□□ -0.77
NPHP3-204ENST00000469232 COL24A1Q17RW2 1714 aa10.27□□□□□ -0.77
NPHP3-204ENST00000469232 CWF19L2Q2TBE0 894 aaKnown RBP10.27□□□□□ -0.77
NPHP3-204ENST00000469232 MYD88Q99836 296 aa10.27□□□□□ -0.77
NPHP3-204ENST00000469232 USP42Q9H9J4 1324 aaKnown RBP10.27□□□□□ -0.77
NPHP3-204ENST00000469232 TUBGCP6Q96RT7 1819 aa10.27□□□□□ -0.77
NPHP3-204ENST00000469232 BAG6P46379 1132 aa10.26□□□□□ -0.77
NPHP3-204ENST00000469232 ZNF827Q17R98 1081 aa10.26□□□□□ -0.77
NPHP3-204ENST00000469232 SIRT2Q8IXJ6 389 aa10.26□□□□□ -0.77
NPHP3-204ENST00000469232 ARHGEF1Q92888 912 aaKnown RBP10.26□□□□□ -0.77
NPHP3-204ENST00000469232 ZBTB3Q9H5J0 574 aa10.26□□□□□ -0.77
NPHP3-204ENST00000469232 AFDNP55196 1824 aaKnown RBP10.26□□□□□ -0.77
NPHP3-204ENST00000469232 IRX5P78411 483 aaPredicted RBP10.25□□□□□ -0.77
NPHP3-204ENST00000469232 NLRP10Q86W26 655 aa10.25□□□□□ -0.77
NPHP3-204ENST00000469232 RPAP2Q8IXW5 612 aaPredicted RBP10.25□□□□□ -0.77
NPHP3-204ENST00000469232 ANKRD44Q8N8A2 993 aa10.25□□□□□ -0.77
NPHP3-204ENST00000469232 FLAD1Q8NFF5 587 aa10.25□□□□□ -0.77
NPHP3-204ENST00000469232 RNF25Q96BH1 459 aaPredicted RBP10.25□□□□□ -0.77
NPHP3-204ENST00000469232 KAZALD1Q96I82 304 aa10.25□□□□□ -0.77
NPHP3-204ENST00000469232 AK7Q96M32 723 aa10.25□□□□□ -0.77
NPHP3-204ENST00000469232 PLA2G12BQ9BX93 195 aa10.25□□□□□ -0.77
NPHP3-204ENST00000469232 CWC25Q9NXE8 425 aaPredicted RBP10.25□□□□□ -0.77
NPHP3-204ENST00000469232 TBC1D2BQ9UPU7 963 aa10.25□□□□□ -0.77
NPHP3-204ENST00000469232 HDAC5Q9UQL6 1122 aa10.25□□□□□ -0.77
NPHP3-204ENST00000469232 GNAI2P04899 355 aa10.25□□□□□ -0.77
NPHP3-204ENST00000469232 PCCAP05165 728 aaPredicted RBP10.25□□□□□ -0.77
NPHP3-204ENST00000469232 NBPF7P0C2Y1 421 aaPredicted RBP10.25□□□□□ -0.77
NPHP3-204ENST00000469232 EN1Q05925 392 aaPredicted RBP10.25□□□□□ -0.77
NPHP3-204ENST00000469232 EZH2Q15910 746 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms