RNA–Protein interactions for RNA: ENST00000469114.1

UPK3B-204, Transcript of uroplakin 3B, humanhuman

TSL 3

Gene UPK3B, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-204ENST00000469114 DDX21Q9NR30 783 aaKnown RBP eCLIP25.98■■□□□ 1.75
UPK3B-204ENST00000469114 NUP98P52948 1817 aa25.98■■□□□ 1.75
UPK3B-204ENST00000469114 ERVV-1B6SEH8 477 aa25.97■■□□□ 1.75
UPK3B-204ENST00000469114 GRIPAP1Q4V328 841 aa25.97■■□□□ 1.75
UPK3B-204ENST00000469114 NUTM1Q86Y26 1132 aa25.97■■□□□ 1.75
UPK3B-204ENST00000469114 RPGRQ92834 1020 aaKnown RBP25.97■■□□□ 1.75
UPK3B-204ENST00000469114 LTBP1Q14766 1721 aa25.95■■□□□ 1.74
UPK3B-204ENST00000469114 HOXA10P31260 410 aaPredicted RBP25.95■■□□□ 1.74
UPK3B-204ENST00000469114 LARGE2Q8N3Y3 721 aa25.95■■□□□ 1.74
UPK3B-204ENST00000469114 NGEFQ8N5V2 710 aa25.95■■□□□ 1.74
UPK3B-204ENST00000469114 ABHD8Q96I13 439 aa25.95■■□□□ 1.74
UPK3B-204ENST00000469114 COL4A5P29400 1685 aa25.95■■□□□ 1.74
UPK3B-204ENST00000469114 RIC1Q4ADV7 1423 aa25.95■■□□□ 1.74
UPK3B-204ENST00000469114 MAP3K15Q6ZN16 1313 aa25.94■■□□□ 1.74
UPK3B-204ENST00000469114 THSD7BQ9C0I4 1608 aa25.94■■□□□ 1.74
UPK3B-204ENST00000469114 IBTKQ9P2D0 1353 aaPredicted RBP25.94■■□□□ 1.74
UPK3B-204ENST00000469114 ECE1P42892 770 aa25.93■■□□□ 1.74
UPK3B-204ENST00000469114 KIF6Q6ZMV9 814 aa25.93■■□□□ 1.74
UPK3B-204ENST00000469114 TRPM7Q96QT4 1865 aa25.93■■□□□ 1.74
UPK3B-204ENST00000469114 SCNN1DP51172 638 aa25.92■■□□□ 1.74
UPK3B-204ENST00000469114 PAXIP1Q6ZW49 1069 aaPredicted RBP25.92■■□□□ 1.74
UPK3B-204ENST00000469114 PNISRQ8TF01 805 aaKnown RBP25.92■■□□□ 1.74
UPK3B-204ENST00000469114 BEGAINQ9BUH8 593 aa25.92■■□□□ 1.74
UPK3B-204ENST00000469114 MIS18AQ9NYP9 233 aa25.92■■□□□ 1.74
UPK3B-204ENST00000469114 EPS15P42566 896 aa25.91■■□□□ 1.74
UPK3B-204ENST00000469114 USP50Q70EL3 339 aaPredicted RBP25.91■■□□□ 1.74
UPK3B-204ENST00000469114 RBM17Q96I25 401 aaKnown RBP25.91■■□□□ 1.74
UPK3B-204ENST00000469114 CAPNS2Q96L46 248 aa25.91■■□□□ 1.74
UPK3B-204ENST00000469114 CRAMP1Q96RY5 1269 aa25.91■■□□□ 1.74
UPK3B-204ENST00000469114 KDM3BQ7LBC6 1761 aa25.91■■□□□ 1.74
UPK3B-204ENST00000469114 PPP2R1AP30153 589 aa25.9■■□□□ 1.74
UPK3B-204ENST00000469114 NIM1KQ8IY84 436 aa25.9■■□□□ 1.74
UPK3B-204ENST00000469114 RRP7AQ9Y3A4 280 aaKnown RBP25.9■■□□□ 1.74
UPK3B-204ENST00000469114 PPEF1O14829 653 aaPredicted RBP25.89■■□□□ 1.74
UPK3B-204ENST00000469114 GPTP24298 496 aa25.89■■□□□ 1.74
UPK3B-204ENST00000469114 TTLL7Q6ZT98 887 aa25.89■■□□□ 1.74
UPK3B-204ENST00000469114 UBN2Q6ZU65 1347 aa25.88■■□□□ 1.73
UPK3B-204ENST00000469114 NEFMP07197 916 aa25.88■■□□□ 1.73
UPK3B-204ENST00000469114 FMR1Q06787 632 aaKnown RBP eCLIP25.88■■□□□ 1.73
UPK3B-204ENST00000469114 GPR101Q96P66 508 aaPredicted RBP25.88■■□□□ 1.73
UPK3B-204ENST00000469114 TMX4Q9H1E5 349 aaPredicted RBP25.88■■□□□ 1.73
UPK3B-204ENST00000469114 DLG5Q8TDM6 1919 aa25.87■■□□□ 1.73
UPK3B-204ENST00000469114 GRM1Q13255 1194 aa25.87■■□□□ 1.73
UPK3B-204ENST00000469114 SUSD4Q5VX71 490 aa25.87■■□□□ 1.73
UPK3B-204ENST00000469114 CYP4F22Q6NT55 531 aa25.87■■□□□ 1.73
UPK3B-204ENST00000469114 ZBTB3Q9H5J0 574 aa25.87■■□□□ 1.73
UPK3B-204ENST00000469114 TCERG1O14776 1098 aaKnown RBP25.86■■□□□ 1.73
UPK3B-204ENST00000469114 MYL6BP14649 208 aa25.86■■□□□ 1.73
UPK3B-204ENST00000469114 PPIP5K2O43314 1243 aa25.85■■□□□ 1.73
UPK3B-204ENST00000469114 FAM161AQ3B820 660 aa25.85■■□□□ 1.73
UPK3B-204ENST00000469114 TLL2Q9Y6L7 1015 aa25.85■■□□□ 1.73
UPK3B-204ENST00000469114 TRAF5O00463 557 aa25.84■■□□□ 1.73
UPK3B-204ENST00000469114 NTSR2O95665 410 aa25.84■■□□□ 1.73
UPK3B-204ENST00000469114 EIF4A1P60842 406 aaKnown RBP25.84■■□□□ 1.73
UPK3B-204ENST00000469114 CST9Q5W186 159 aa25.84■■□□□ 1.73
UPK3B-204ENST00000469114 PPP1R42Q7Z4L9 355 aa25.84■■□□□ 1.73
UPK3B-204ENST00000469114 ZNF34Q8IZ26 560 aa25.84■■□□□ 1.73
UPK3B-204ENST00000469114 VPS33BQ9H267 617 aa25.84■■□□□ 1.73
UPK3B-204ENST00000469114 ADARB2Q9NS39 739 aaKnown RBP25.84■■□□□ 1.73
UPK3B-204ENST00000469114 GIGYF2Q6Y7W6 1299 aaKnown RBP25.83■■□□□ 1.73
UPK3B-204ENST00000469114 GPRC5DQ9NZD1 345 aa25.83■■□□□ 1.73
UPK3B-204ENST00000469114 MAP2K2P36507 400 aa25.82■■□□□ 1.72
UPK3B-204ENST00000469114 AOC3Q16853 763 aa25.82■■□□□ 1.72
UPK3B-204ENST00000469114 PARP10Q53GL7 1025 aa25.82■■□□□ 1.72
UPK3B-204ENST00000469114 SLC51AQ86UW1 340 aa25.82■■□□□ 1.72
UPK3B-204ENST00000469114 NLRP3Q96P20 1036 aa25.82■■□□□ 1.72
UPK3B-204ENST00000469114 SUPT20HQ8NEM7 779 aa25.81■■□□□ 1.72
UPK3B-204ENST00000469114 ATP6V0A2Q9Y487 856 aa25.81■■□□□ 1.72
UPK3B-204ENST00000469114 ERBB4Q15303 1308 aa25.81■■□□□ 1.72
UPK3B-204ENST00000469114 CCDC85CA6NKD9 419 aa25.8■■□□□ 1.72
UPK3B-204ENST00000469114 C3orf67Q6ZVT6 689 aa25.8■■□□□ 1.72
UPK3B-204ENST00000469114 SLC34A2O95436 690 aa25.79■■□□□ 1.72
UPK3B-204ENST00000469114 ZNRF3Q9ULT6 936 aa25.79■■□□□ 1.72
UPK3B-204ENST00000469114 AOC2O75106 756 aa25.78■■□□□ 1.72
UPK3B-204ENST00000469114 CA12O43570 354 aa25.77■■□□□ 1.72
UPK3B-204ENST00000469114 CELF2O95319 508 aaKnown RBP25.77■■□□□ 1.72
UPK3B-204ENST00000469114 CXCL9Q07325 125 aa25.77■■□□□ 1.72
UPK3B-204ENST00000469114 SAPCD2Q86UD0 394 aa25.77■■□□□ 1.72
UPK3B-204ENST00000469114 GMPSP49915 693 aaPredicted RBP25.76■■□□□ 1.71
UPK3B-204ENST00000469114 MLLT1Q03111 559 aaPredicted RBP25.76■■□□□ 1.71
UPK3B-204ENST00000469114 NFE2L2Q16236 605 aa25.76■■□□□ 1.71
UPK3B-204ENST00000469114 SLC10A5Q5PT55 438 aa25.76■■□□□ 1.71
UPK3B-204ENST00000469114 UTP14AQ9BVJ6 771 aaKnown RBP25.76■■□□□ 1.71
UPK3B-204ENST00000469114 RTFDC1Q9BY42 306 aaPredicted RBP25.76■■□□□ 1.71
UPK3B-204ENST00000469114 TSKSQ9UJT2 592 aa25.76■■□□□ 1.71
UPK3B-204ENST00000469114 ABCC4O15439 1325 aa25.76■■□□□ 1.71
UPK3B-204ENST00000469114 CDHR2Q9BYE9 1310 aa25.76■■□□□ 1.71
UPK3B-204ENST00000469114 HHIPL1Q96JK4 782 aa25.75■■□□□ 1.71
UPK3B-204ENST00000469114 THUMPD2Q9BTF0 503 aaKnown RBP25.75■■□□□ 1.71
UPK3B-204ENST00000469114 CIAPIN1Q6FI81 312 aa25.74■■□□□ 1.71
UPK3B-204ENST00000469114 DPP8Q6V1X1 898 aaPredicted RBP25.74■■□□□ 1.71
UPK3B-204ENST00000469114 GLIS2Q9BZE0 524 aaPredicted RBP25.74■■□□□ 1.71
UPK3B-204ENST00000469114 BBOX1O75936 387 aa25.73■■□□□ 1.71
UPK3B-204ENST00000469114 RGS19P49795 217 aa25.73■■□□□ 1.71
UPK3B-204ENST00000469114 SP8Q8IXZ3 490 aa25.73■■□□□ 1.71
UPK3B-204ENST00000469114 MPNDQ8N594 471 aa25.73■■□□□ 1.71
UPK3B-204ENST00000469114 ZC3H15Q8WU90 426 aaKnown RBP25.73■■□□□ 1.71
UPK3B-204ENST00000469114 PLEKHF1Q96S99 279 aa25.73■■□□□ 1.71
UPK3B-204ENST00000469114 BCL2L13Q9BXK5 485 aa25.73■■□□□ 1.71
UPK3B-204ENST00000469114 PGAP2Q9UHJ9 254 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms