RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 NUDT16Q96DE0 195 aaKnown RBP8.51□□□□□ -1.05
GAPVD1-211ENST00000467707 GMCL1Q96IK5 515 aa8.51□□□□□ -1.05
GAPVD1-211ENST00000467707 HSH2DQ96JZ2 352 aa8.51□□□□□ -1.05
GAPVD1-211ENST00000467707 IGHA2P01877 340 aa8.5□□□□□ -1.05
GAPVD1-211ENST00000467707 ZNF16P17020 682 aaPredicted RBP8.5□□□□□ -1.05
GAPVD1-211ENST00000467707 DSC3Q14574 896 aa8.5□□□□□ -1.05
GAPVD1-211ENST00000467707 GIPC2Q8TF65 315 aa8.5□□□□□ -1.05
GAPVD1-211ENST00000467707 GPAMQ9HCL2 828 aa8.5□□□□□ -1.05
GAPVD1-211ENST00000467707 SENP3-EIF4A1A0A087X0R7 540 aa8.49□□□□□ -1.05
GAPVD1-211ENST00000467707 PTSQ03393 145 aa8.49□□□□□ -1.05
GAPVD1-211ENST00000467707 TYRO3Q06418 890 aa8.49□□□□□ -1.05
GAPVD1-211ENST00000467707 PDE12Q6L8Q7 609 aaKnown RBP8.49□□□□□ -1.05
GAPVD1-211ENST00000467707 TRIM47Q96LD4 638 aa8.49□□□□□ -1.05
GAPVD1-211ENST00000467707 GAS2L1Q99501 681 aaPredicted RBP8.49□□□□□ -1.05
GAPVD1-211ENST00000467707 RUBCNLQ9H714 662 aa8.49□□□□□ -1.05
GAPVD1-211ENST00000467707 SLC35F4A4IF30 521 aa8.48□□□□□ -1.05
GAPVD1-211ENST00000467707 GPR182O15218 404 aa8.48□□□□□ -1.05
GAPVD1-211ENST00000467707 XKR5Q6UX68 686 aa8.48□□□□□ -1.05
GAPVD1-211ENST00000467707 CEP63Q96MT8 703 aa8.48□□□□□ -1.05
GAPVD1-211ENST00000467707 RTCBQ9Y3I0 505 aaKnown RBP8.48□□□□□ -1.05
GAPVD1-211ENST00000467707 P4HBP07237 508 aaKnown RBP8.47□□□□□ -1.05
GAPVD1-211ENST00000467707 FAM157BP0CG42 384 aa8.47□□□□□ -1.05
GAPVD1-211ENST00000467707 KCNQ4P56696 695 aa8.47□□□□□ -1.05
GAPVD1-211ENST00000467707 ATP2B2Q01814 1243 aa8.47□□□□□ -1.05
GAPVD1-211ENST00000467707 LAMC2Q13753 1193 aa8.47□□□□□ -1.05
GAPVD1-211ENST00000467707 C8orf34Q49A92 452 aa8.47□□□□□ -1.05
GAPVD1-211ENST00000467707 EGFRP00533 1210 aa8.46□□□□□ -1.06
GAPVD1-211ENST00000467707 RIPOR1Q6ZS17 1223 aa8.46□□□□□ -1.06
GAPVD1-211ENST00000467707 KLRG1Q96E93 195 aa8.46□□□□□ -1.06
GAPVD1-211ENST00000467707 NUCKS1Q9H1E3 243 aaKnown RBP8.46□□□□□ -1.06
GAPVD1-211ENST00000467707 DNAJC25Q9H1X3 360 aa8.46□□□□□ -1.06
GAPVD1-211ENST00000467707 EFCC1Q9HA90 598 aa8.46□□□□□ -1.06
GAPVD1-211ENST00000467707 BRD7Q9NPI1 651 aa8.46□□□□□ -1.06
GAPVD1-211ENST00000467707 PCDHGC4Q9Y5F7 938 aa8.46□□□□□ -1.06
GAPVD1-211ENST00000467707 PRPF40AO75400 957 aaKnown RBP8.45□□□□□ -1.06
GAPVD1-211ENST00000467707 ALG1LQ6GMV1 187 aa8.45□□□□□ -1.06
GAPVD1-211ENST00000467707 TRIM22Q8IYM9 498 aa8.45□□□□□ -1.06
GAPVD1-211ENST00000467707 CCDC155Q8N6L0 562 aa8.45□□□□□ -1.06
GAPVD1-211ENST00000467707 FBF1Q8TES7 1133 aa8.45□□□□□ -1.06
GAPVD1-211ENST00000467707 ZNF428Q96B54 188 aa8.45□□□□□ -1.06
GAPVD1-211ENST00000467707 NIF3L1Q9GZT8 377 aa8.45□□□□□ -1.06
GAPVD1-211ENST00000467707 DACH1Q9UI36 760 aa8.45□□□□□ -1.06
GAPVD1-211ENST00000467707 UBAP1LF5GYI3 381 aa8.44□□□□□ -1.06
GAPVD1-211ENST00000467707 ATXN7O15265 892 aaPredicted RBP8.44□□□□□ -1.06
GAPVD1-211ENST00000467707 VAMP1P23763 118 aa8.44□□□□□ -1.06
GAPVD1-211ENST00000467707 MAPK8P45983 427 aa8.44□□□□□ -1.06
GAPVD1-211ENST00000467707 ENOX2Q16206 610 aaKnown RBP8.44□□□□□ -1.06
GAPVD1-211ENST00000467707 ZNF438Q7Z4V0 828 aa8.44□□□□□ -1.06
GAPVD1-211ENST00000467707 CMTR1Q8N1G2 835 aaKnown RBP8.44□□□□□ -1.06
GAPVD1-211ENST00000467707 ZCCHC2Q9C0B9 1178 aaKnown RBP8.44□□□□□ -1.06
GAPVD1-211ENST00000467707 GGNBP2Q9H3C7 697 aa8.44□□□□□ -1.06
GAPVD1-211ENST00000467707 KCNMB2Q9Y691 235 aa8.44□□□□□ -1.06
GAPVD1-211ENST00000467707 EFSO43281 561 aa8.43□□□□□ -1.06
GAPVD1-211ENST00000467707 LDHBP07195 334 aaKnown RBP8.43□□□□□ -1.06
GAPVD1-211ENST00000467707 SNX29Q8TEQ0 813 aa8.43□□□□□ -1.06
GAPVD1-211ENST00000467707 MRRFQ96E11 262 aaKnown RBP8.43□□□□□ -1.06
GAPVD1-211ENST00000467707 KCNH4Q9UQ05 1017 aa8.43□□□□□ -1.06
GAPVD1-211ENST00000467707 XYLBO75191 536 aa8.42□□□□□ -1.06
GAPVD1-211ENST00000467707 FRMD6Q96NE9 622 aa8.42□□□□□ -1.06
GAPVD1-211ENST00000467707 CSRNP1Q96S65 589 aa8.42□□□□□ -1.06
GAPVD1-211ENST00000467707 PHF24Q9UPV7 400 aa8.42□□□□□ -1.06
GAPVD1-211ENST00000467707 UNCXA6NJT0 531 aa8.41□□□□□ -1.06
GAPVD1-211ENST00000467707 SOBPA7XYQ1 873 aa8.41□□□□□ -1.06
GAPVD1-211ENST00000467707 CPNE3O75131 537 aaKnown RBP8.41□□□□□ -1.06
GAPVD1-211ENST00000467707 TNFRSF21O75509 655 aa8.41□□□□□ -1.06
GAPVD1-211ENST00000467707 ITGA6P23229 1130 aa8.41□□□□□ -1.06
GAPVD1-211ENST00000467707 TRIP4Q15650 581 aaPredicted RBP8.41□□□□□ -1.06
GAPVD1-211ENST00000467707 FOXR1Q6PIV2 292 aa8.41□□□□□ -1.06
GAPVD1-211ENST00000467707 NLRP13Q86W25 1043 aa8.41□□□□□ -1.06
GAPVD1-211ENST00000467707 PMEPA1Q969W9 287 aa8.41□□□□□ -1.06
GAPVD1-211ENST00000467707 ELP3Q9H9T3 547 aa8.41□□□□□ -1.06
GAPVD1-211ENST00000467707 PNMA6FA0A0J9YX94 578 aa8.4□□□□□ -1.06
GAPVD1-211ENST00000467707 EIF1AYO14602 144 aaKnown RBP8.4□□□□□ -1.06
GAPVD1-211ENST00000467707 TNP2Q05952 138 aa8.4□□□□□ -1.06
GAPVD1-211ENST00000467707 UBAP2LQ14157 1087 aaKnown RBP8.4□□□□□ -1.06
GAPVD1-211ENST00000467707 DBN1Q16643 649 aa8.4□□□□□ -1.06
GAPVD1-211ENST00000467707 GMPR2Q9P2T1 348 aaKnown RBP8.4□□□□□ -1.06
GAPVD1-211ENST00000467707 ATXN7L1Q9ULK2 861 aaPredicted RBP8.4□□□□□ -1.06
GAPVD1-211ENST00000467707 KHNYNO15037 678 aaKnown RBP8.39□□□□□ -1.07
GAPVD1-211ENST00000467707 THBS1P07996 1170 aa8.39□□□□□ -1.07
GAPVD1-211ENST00000467707 GRNP28799 593 aaKnown RBP8.39□□□□□ -1.07
GAPVD1-211ENST00000467707 XPCQ01831 940 aaPredicted RBP8.39□□□□□ -1.07
GAPVD1-211ENST00000467707 CCINQ13939 588 aa8.39□□□□□ -1.07
GAPVD1-211ENST00000467707 Q6ZNB5 142 aa8.39□□□□□ -1.07
GAPVD1-211ENST00000467707 CFHR5Q9BXR6 569 aa8.39□□□□□ -1.07
GAPVD1-211ENST00000467707 NDFIP2Q9NV92 336 aa8.39□□□□□ -1.07
GAPVD1-211ENST00000467707 ABI2Q9NYB9 513 aaPredicted RBP8.39□□□□□ -1.07
GAPVD1-211ENST00000467707 MARK1Q9P0L2 795 aa8.39□□□□□ -1.07
GAPVD1-211ENST00000467707 DCDC2BA2VCK2 349 aa8.38□□□□□ -1.07
GAPVD1-211ENST00000467707 C11orf95C9JLR9 678 aaPredicted RBP8.38□□□□□ -1.07
GAPVD1-211ENST00000467707 PHACTR2O75167 634 aa8.38□□□□□ -1.07
GAPVD1-211ENST00000467707 MAPTP10636 758 aaKnown RBP8.38□□□□□ -1.07
GAPVD1-211ENST00000467707 NEUROD1Q13562 356 aa8.38□□□□□ -1.07
GAPVD1-211ENST00000467707 FAM182BQ5T319 152 aa8.38□□□□□ -1.07
GAPVD1-211ENST00000467707 TTC39BQ5VTQ0 682 aaPredicted RBP8.38□□□□□ -1.07
GAPVD1-211ENST00000467707 ZNF837Q96EG3 531 aaPredicted RBP8.38□□□□□ -1.07
GAPVD1-211ENST00000467707 TRERF1Q96PN7 1200 aa8.38□□□□□ -1.07
GAPVD1-211ENST00000467707 KIAA1522Q9P206 1035 aaPredicted RBP8.38□□□□□ -1.07
GAPVD1-211ENST00000467707 USP20Q9Y2K6 914 aa8.38□□□□□ -1.07
GAPVD1-211ENST00000467707 A6NHS1 94 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms