RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 A0A0G2JLW4 131 aa14.13□□□□□ -0.15
MSH5-212ENST00000467319 IGKV5-2P06315 115 aa14.13□□□□□ -0.15
MSH5-212ENST00000467319 YBX3P16989 372 aaKnown RBP eCLIP14.13□□□□□ -0.15
MSH5-212ENST00000467319 BRPF1P55201 1214 aaPredicted RBP14.13□□□□□ -0.15
MSH5-212ENST00000467319 FKBP5Q13451 457 aaPredicted RBP14.13□□□□□ -0.15
MSH5-212ENST00000467319 CRY2Q49AN0 593 aa14.13□□□□□ -0.15
MSH5-212ENST00000467319 ERFEQ4G0M1 354 aa14.13□□□□□ -0.15
MSH5-212ENST00000467319 PPP1R42Q7Z4L9 355 aa14.13□□□□□ -0.15
MSH5-212ENST00000467319 NUTM1Q86Y26 1132 aa14.13□□□□□ -0.15
MSH5-212ENST00000467319 UTP14AQ9BVJ6 771 aaKnown RBP14.13□□□□□ -0.15
MSH5-212ENST00000467319 PDZRN3Q9UPQ7 1066 aa14.13□□□□□ -0.15
MSH5-212ENST00000467319 FAM177BA6PVY3 158 aa14.12□□□□□ -0.15
MSH5-212ENST00000467319 ATP5J2-PTCD1G3V325 749 aa14.12□□□□□ -0.15
MSH5-212ENST00000467319 PDE6BP35913 854 aa14.12□□□□□ -0.15
MSH5-212ENST00000467319 MYD88Q99836 296 aa14.12□□□□□ -0.15
MSH5-212ENST00000467319 PTPRCP08575 1304 aa14.12□□□□□ -0.15
MSH5-212ENST00000467319 SRGNP10124 158 aa14.11□□□□□ -0.15
MSH5-212ENST00000467319 RARSP54136 660 aaKnown RBP14.11□□□□□ -0.15
MSH5-212ENST00000467319 SLC10A5Q5PT55 438 aa14.11□□□□□ -0.15
MSH5-212ENST00000467319 C2CD5Q86YS7 1000 aa14.11□□□□□ -0.15
MSH5-212ENST00000467319 CCDC191Q8NCU4 936 aa14.11□□□□□ -0.15
MSH5-212ENST00000467319 DNAAF4Q8WXU2 420 aa14.11□□□□□ -0.15
MSH5-212ENST00000467319 BCL2L13Q9BXK5 485 aa14.11□□□□□ -0.15
MSH5-212ENST00000467319 SMC4Q9NTJ3 1288 aa14.11□□□□□ -0.15
MSH5-212ENST00000467319 SH3TC1Q8TE82 1336 aa14.11□□□□□ -0.15
MSH5-212ENST00000467319 CACNA1SQ13698 1873 aa14.1□□□□□ -0.15
MSH5-212ENST00000467319 NEURL1BA8MQ27 555 aa14.1□□□□□ -0.15
MSH5-212ENST00000467319 NPHP1O15259 732 aa14.1□□□□□ -0.15
MSH5-212ENST00000467319 C3orf67Q6ZVT6 689 aa14.1□□□□□ -0.15
MSH5-212ENST00000467319 CWC25Q9NXE8 425 aaPredicted RBP14.1□□□□□ -0.15
MSH5-212ENST00000467319 TRMT112Q9UI30 125 aaKnown RBP14.1□□□□□ -0.15
MSH5-212ENST00000467319 F6X3S4 739 aa14.09□□□□□ -0.15
MSH5-212ENST00000467319 H0YIN7 160 aa14.09□□□□□ -0.15
MSH5-212ENST00000467319 CWF19L2Q2TBE0 894 aaKnown RBP14.09□□□□□ -0.15
MSH5-212ENST00000467319 STYK1Q6J9G0 422 aa14.09□□□□□ -0.15
MSH5-212ENST00000467319 SYNE4Q8N205 404 aa14.09□□□□□ -0.15
MSH5-212ENST00000467319 LINS1Q8NG48 757 aa14.09□□□□□ -0.15
MSH5-212ENST00000467319 PIM2Q9P1W9 311 aa14.09□□□□□ -0.15
MSH5-212ENST00000467319 LRRC37AA6NMS7 1700 aa14.09□□□□□ -0.15
MSH5-212ENST00000467319 SLX4Q8IY92 1834 aa14.08□□□□□ -0.15
MSH5-212ENST00000467319 SNED1Q8TER0 1413 aa14.08□□□□□ -0.15
MSH5-212ENST00000467319 COL4A1P02462 1669 aa14.08□□□□□ -0.16
MSH5-212ENST00000467319 PCCAP05165 728 aaPredicted RBP14.08□□□□□ -0.16
MSH5-212ENST00000467319 NPR1P16066 1061 aa14.08□□□□□ -0.16
MSH5-212ENST00000467319 GTF2E1P29083 439 aaPredicted RBP14.08□□□□□ -0.16
MSH5-212ENST00000467319 NEXNQ0ZGT2 675 aa14.08□□□□□ -0.16
MSH5-212ENST00000467319 BEND3Q5T5X7 828 aa14.08□□□□□ -0.16
MSH5-212ENST00000467319 ZBTB38Q8NAP3 1195 aaPredicted RBP14.08□□□□□ -0.16
MSH5-212ENST00000467319 KIF16BQ96L93 1317 aa14.08□□□□□ -0.16
MSH5-212ENST00000467319 CDHR2Q9BYE9 1310 aa14.08□□□□□ -0.16
MSH5-212ENST00000467319 HOXA10P31260 410 aaPredicted RBP14.07□□□□□ -0.16
MSH5-212ENST00000467319 DALRD3Q5D0E6 543 aaKnown RBP14.07□□□□□ -0.16
MSH5-212ENST00000467319 FAM89AQ96GI7 184 aa14.07□□□□□ -0.16
MSH5-212ENST00000467319 MASTLQ96GX5 879 aa14.07□□□□□ -0.16
MSH5-212ENST00000467319 WWC3Q9ULE0 1092 aa14.07□□□□□ -0.16
MSH5-212ENST00000467319 MYH3P11055 1940 aa14.07□□□□□ -0.16
MSH5-212ENST00000467319 HCLS1P14317 486 aaPredicted RBP14.06□□□□□ -0.16
MSH5-212ENST00000467319 CASP7P55210 303 aa14.06□□□□□ -0.16
MSH5-212ENST00000467319 GCKRQ14397 625 aa14.06□□□□□ -0.16
MSH5-212ENST00000467319 GPR162Q16538 588 aa14.06□□□□□ -0.16
MSH5-212ENST00000467319 PRPF40BQ6NWY9 871 aaKnown RBP14.06□□□□□ -0.16
MSH5-212ENST00000467319 TTLL6Q8N841 843 aa14.06□□□□□ -0.16
MSH5-212ENST00000467319 BCS1LQ9Y276 419 aa14.06□□□□□ -0.16
MSH5-212ENST00000467319 FER1L6Q2WGJ9 1857 aa14.06□□□□□ -0.16
MSH5-212ENST00000467319 IRS4O14654 1257 aaPredicted RBP14.05□□□□□ -0.16
MSH5-212ENST00000467319 GRIN3BO60391 1043 aa14.05□□□□□ -0.16
MSH5-212ENST00000467319 CHD4Q14839 1912 aa14.04□□□□□ -0.16
MSH5-212ENST00000467319 H7C1W4 665 aa14.04□□□□□ -0.16
MSH5-212ENST00000467319 ALDH1L1O75891 902 aa14.04□□□□□ -0.16
MSH5-212ENST00000467319 SF3B3Q15393 1217 aaKnown RBP14.04□□□□□ -0.16
MSH5-212ENST00000467319 PELP1Q8IZL8 1130 aaKnown RBP14.04□□□□□ -0.16
MSH5-212ENST00000467319 CNKSR1Q969H4 720 aa14.04□□□□□ -0.16
MSH5-212ENST00000467319 ZNF622Q969S3 477 aaKnown RBP eCLIP14.04□□□□□ -0.162e-13■□□□□ 10.4
MSH5-212ENST00000467319 NLRP3Q96P20 1036 aa14.04□□□□□ -0.16
MSH5-212ENST00000467319 CRAMP1Q96RY5 1269 aa14.04□□□□□ -0.16
MSH5-212ENST00000467319 ABCC4O15439 1325 aa14.04□□□□□ -0.16
MSH5-212ENST00000467319 RTL9Q8NET4 1388 aa14.04□□□□□ -0.16
MSH5-212ENST00000467319 BCAR3O75815 825 aa14.03□□□□□ -0.16
MSH5-212ENST00000467319 RTL5Q5HYW3 569 aaPredicted RBP14.03□□□□□ -0.16
MSH5-212ENST00000467319 UBE3BQ7Z3V4 1068 aa14.03□□□□□ -0.16
MSH5-212ENST00000467319 C7orf43Q8WVR3 580 aa14.03□□□□□ -0.16
MSH5-212ENST00000467319 ARHGAP45Q92619 1136 aa14.03□□□□□ -0.16
MSH5-212ENST00000467319 PLA2G12BQ9BX93 195 aa14.03□□□□□ -0.16
MSH5-212ENST00000467319 NOB1Q9ULX3 412 aaKnown RBP14.03□□□□□ -0.16
MSH5-212ENST00000467319 UTYO14607 1347 aa14.03□□□□□ -0.16
MSH5-212ENST00000467319 LTBP1Q14766 1721 aa14.03□□□□□ -0.16
MSH5-212ENST00000467319 DCAF8L1A6NGE4 600 aa14.02□□□□□ -0.17
MSH5-212ENST00000467319 GRM8O00222 908 aa14.02□□□□□ -0.17
MSH5-212ENST00000467319 HSP90B1P14625 803 aaKnown RBP14.02□□□□□ -0.17
MSH5-212ENST00000467319 CTSWP56202 376 aa14.02□□□□□ -0.17
MSH5-212ENST00000467319 RPGRQ92834 1020 aaKnown RBP14.02□□□□□ -0.17
MSH5-212ENST00000467319 API5Q9BZZ5 524 aaKnown RBP14.02□□□□□ -0.17
MSH5-212ENST00000467319 SRCIN1Q9C0H9 1055 aa14.02□□□□□ -0.17
MSH5-212ENST00000467319 TAF1P21675 1872 aa14.01□□□□□ -0.17
MSH5-212ENST00000467319 DUOX1Q9NRD9 1551 aa14.01□□□□□ -0.17
MSH5-212ENST00000467319 PDE8AO60658 829 aa14.01□□□□□ -0.17
MSH5-212ENST00000467319 TRIM27P14373 513 aa14.01□□□□□ -0.17
MSH5-212ENST00000467319 ALDH1B1P30837 517 aa14.01□□□□□ -0.17
MSH5-212ENST00000467319 SLC4A10Q6U841 1118 aa14.01□□□□□ -0.17
MSH5-212ENST00000467319 JARID2Q92833 1246 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms