RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 ADAMTS13Q76LX8 1427 aa8.52□□□□□ -1.05
PTCD3-207ENST00000467273 TUSC1Q2TAM9 212 aa8.51□□□□□ -1.05
PTCD3-207ENST00000467273 FOXD4L5Q5VV16 416 aaPredicted RBP8.51□□□□□ -1.05
PTCD3-207ENST00000467273 FNBP4Q8N3X1 1017 aaPredicted RBP8.51□□□□□ -1.05
PTCD3-207ENST00000467273 TMPRSS4Q9NRS4 437 aa8.51□□□□□ -1.05
PTCD3-207ENST00000467273 FKBPLQ9UIM3 349 aa8.51□□□□□ -1.05
PTCD3-207ENST00000467273 MYO5BQ9ULV0 1848 aa8.51□□□□□ -1.05
PTCD3-207ENST00000467273 GPR25O00155 361 aa8.5□□□□□ -1.05
PTCD3-207ENST00000467273 ABCC5O15440 1437 aa8.5□□□□□ -1.05
PTCD3-207ENST00000467273 ATRNO75882 1429 aa8.5□□□□□ -1.05
PTCD3-207ENST00000467273 ADH1AP07327 375 aa8.5□□□□□ -1.05
PTCD3-207ENST00000467273 LYSMD3Q7Z3D4 306 aa8.5□□□□□ -1.05
PTCD3-207ENST00000467273 ZNF784Q8NCA9 323 aaPredicted RBP8.5□□□□□ -1.05
PTCD3-207ENST00000467273 RRP7BPQ9NSQ0 103 aa8.5□□□□□ -1.05
PTCD3-207ENST00000467273 ANKRD30AQ9BXX3 1397 aa8.49□□□□□ -1.05
PTCD3-207ENST00000467273 XRN1Q8IZH2 1706 aaKnown RBP8.49□□□□□ -1.05
PTCD3-207ENST00000467273 CLK2P49760 499 aaKnown RBP8.49□□□□□ -1.05
PTCD3-207ENST00000467273 CTDSPL2Q05D32 466 aa8.49□□□□□ -1.05
PTCD3-207ENST00000467273 BEND7Q8N7W2 519 aaPredicted RBP8.49□□□□□ -1.05
PTCD3-207ENST00000467273 MBIPQ9NS73 344 aa8.49□□□□□ -1.05
PTCD3-207ENST00000467273 USP21Q9UK80 565 aa8.49□□□□□ -1.05
PTCD3-207ENST00000467273 SPHKAPQ2M3C7 1700 aa8.49□□□□□ -1.05
PTCD3-207ENST00000467273 DAPK1P53355 1430 aa8.48□□□□□ -1.05
PTCD3-207ENST00000467273 BLMP54132 1417 aaPredicted RBP8.48□□□□□ -1.05
PTCD3-207ENST00000467273 ITGB2P05107 769 aa8.48□□□□□ -1.05
PTCD3-207ENST00000467273 RHOQP17081 205 aa8.48□□□□□ -1.05
PTCD3-207ENST00000467273 PRICKLE2Q7Z3G6 844 aa8.48□□□□□ -1.05
PTCD3-207ENST00000467273 ZNF837Q96EG3 531 aaPredicted RBP8.48□□□□□ -1.05
PTCD3-207ENST00000467273 AMOTL2Q9Y2J4 779 aa8.48□□□□□ -1.05
PTCD3-207ENST00000467273 UNC13BO14795 1591 aa8.48□□□□□ -1.05
PTCD3-207ENST00000467273 COL22A1Q8NFW1 1626 aaPredicted RBP8.47□□□□□ -1.05
PTCD3-207ENST00000467273 ADGRL3Q9HAR2 1447 aa8.47□□□□□ -1.05
PTCD3-207ENST00000467273 PROCP04070 461 aa8.47□□□□□ -1.05
PTCD3-207ENST00000467273 NBPF20Q3BBV1 942 aa8.47□□□□□ -1.05
PTCD3-207ENST00000467273 FOXR1Q6PIV2 292 aa8.47□□□□□ -1.05
PTCD3-207ENST00000467273 RIPOR1Q6ZS17 1223 aa8.47□□□□□ -1.05
PTCD3-207ENST00000467273 LRRN4Q8WUT4 740 aa8.47□□□□□ -1.05
PTCD3-207ENST00000467273 PTPRUQ92729 1446 aa8.46□□□□□ -1.05
PTCD3-207ENST00000467273 BCRP11274 1271 aa8.46□□□□□ -1.06
PTCD3-207ENST00000467273 PTGIRP43119 386 aa8.46□□□□□ -1.06
PTCD3-207ENST00000467273 DDRGK1Q96HY6 314 aa8.46□□□□□ -1.06
PTCD3-207ENST00000467273 POLR3EQ9NVU0 708 aa8.46□□□□□ -1.06
PTCD3-207ENST00000467273 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.46□□□□□ -1.06
PTCD3-207ENST00000467273 ADGRL2O95490 1459 aa8.45□□□□□ -1.06
PTCD3-207ENST00000467273 IQGAP3Q86VI3 1631 aa8.45□□□□□ -1.06
PTCD3-207ENST00000467273 PTK2Q05397 1052 aa8.45□□□□□ -1.06
PTCD3-207ENST00000467273 NR6A1Q15406 480 aa8.45□□□□□ -1.06
PTCD3-207ENST00000467273 ADAM32Q8TC27 787 aa8.45□□□□□ -1.06
PTCD3-207ENST00000467273 MARF1Q9Y4F3 1742 aaKnown RBP8.45□□□□□ -1.06
PTCD3-207ENST00000467273 K7ELQ4 463 aaPredicted RBP8.44□□□□□ -1.06
PTCD3-207ENST00000467273 ADD1P35611 737 aaKnown RBP8.44□□□□□ -1.06
PTCD3-207ENST00000467273 TRIM22Q8IYM9 498 aa8.44□□□□□ -1.06
PTCD3-207ENST00000467273 OCSTAMPQ9BR26 566 aa8.44□□□□□ -1.06
PTCD3-207ENST00000467273 ZC3H4Q9UPT8 1303 aaKnown RBP8.44□□□□□ -1.06
PTCD3-207ENST00000467273 VPS8Q8N3P4 1428 aa8.44□□□□□ -1.06
PTCD3-207ENST00000467273 C1orf167Q5SNV9 1468 aa8.44□□□□□ -1.06
PTCD3-207ENST00000467273 BCL9LQ86UU0 1499 aa8.44□□□□□ -1.06
PTCD3-207ENST00000467273 NALCNQ8IZF0 1738 aa8.43□□□□□ -1.06
PTCD3-207ENST00000467273 ERVH48-1M5A8F1 160 aa8.43□□□□□ -1.06
PTCD3-207ENST00000467273 LILRA1O75019 489 aa8.43□□□□□ -1.06
PTCD3-207ENST00000467273 SF3B2Q13435 895 aaKnown RBP8.43□□□□□ -1.06
PTCD3-207ENST00000467273 KDF1Q8NAX2 398 aaPredicted RBP8.43□□□□□ -1.06
PTCD3-207ENST00000467273 ACDQ96AP0 544 aa8.43□□□□□ -1.06
PTCD3-207ENST00000467273 GJD4Q96KN9 370 aaPredicted RBP8.43□□□□□ -1.06
PTCD3-207ENST00000467273 ARXQ96QS3 562 aa8.43□□□□□ -1.06
PTCD3-207ENST00000467273 MYOM2P54296 1465 aa8.43□□□□□ -1.06
PTCD3-207ENST00000467273 NRXN3Q9Y4C0 1643 aa8.43□□□□□ -1.06
PTCD3-207ENST00000467273 GTPBP3Q969Y2 492 aaKnown RBP8.42□□□□□ -1.06
PTCD3-207ENST00000467273 CYLDQ9NQC7 956 aa8.42□□□□□ -1.06
PTCD3-207ENST00000467273 ANKRD50Q9ULJ7 1429 aa8.42□□□□□ -1.06
PTCD3-207ENST00000467273 PRAG1Q86YV5 1406 aa8.41□□□□□ -1.06
PTCD3-207ENST00000467273 DBN1Q16643 649 aa8.41□□□□□ -1.06
PTCD3-207ENST00000467273 DZIP3Q86Y13 1208 aaKnown RBP8.41□□□□□ -1.06
PTCD3-207ENST00000467273 GMCL1Q96IK5 515 aa8.41□□□□□ -1.06
PTCD3-207ENST00000467273 TRERF1Q96PN7 1200 aa8.41□□□□□ -1.06
PTCD3-207ENST00000467273 E9PCH4 1651 aa8.4□□□□□ -1.06
PTCD3-207ENST00000467273 DDX17Q92841 729 aaKnown RBP8.4□□□□□ -1.06
PTCD3-207ENST00000467273 GAS2L1Q99501 681 aaPredicted RBP8.4□□□□□ -1.06
PTCD3-207ENST00000467273 NPHP3Q7Z494 1330 aa8.39□□□□□ -1.07
PTCD3-207ENST00000467273 MEN1O00255 615 aa8.39□□□□□ -1.07
PTCD3-207ENST00000467273 MX2P20592 715 aa8.39□□□□□ -1.07
PTCD3-207ENST00000467273 RNF144AP50876 292 aaPredicted RBP8.39□□□□□ -1.07
PTCD3-207ENST00000467273 KANK4Q5T7N3 995 aaPredicted RBP8.39□□□□□ -1.07
PTCD3-207ENST00000467273 RSPH6AQ9H0K4 717 aa8.39□□□□□ -1.07
PTCD3-207ENST00000467273 GPSM3Q9Y4H4 160 aa8.39□□□□□ -1.07
PTCD3-207ENST00000467273 GLI3P10071 1580 aa8.39□□□□□ -1.07
PTCD3-207ENST00000467273 SLIT2O94813 1529 aa8.39□□□□□ -1.07
PTCD3-207ENST00000467273 RALGAPBQ86X10 1494 aa8.38□□□□□ -1.07
PTCD3-207ENST00000467273 METP08581 1390 aa8.38□□□□□ -1.07
PTCD3-207ENST00000467273 H7C1W4 665 aa8.38□□□□□ -1.07
PTCD3-207ENST00000467273 BAG6P46379 1132 aa8.38□□□□□ -1.07
PTCD3-207ENST00000467273 UNC5CLQ8IV45 518 aa8.38□□□□□ -1.07
PTCD3-207ENST00000467273 Q8N3U1 123 aa8.38□□□□□ -1.07
PTCD3-207ENST00000467273 NSFL1CQ9UNZ2 370 aaKnown RBP8.38□□□□□ -1.07
PTCD3-207ENST00000467273 BRWD3Q6RI45 1802 aa8.38□□□□□ -1.07
PTCD3-207ENST00000467273 DEFB132Q7Z7B7 95 aa8.37□□□□□ -1.07
PTCD3-207ENST00000467273 KRTAP4-8Q9BYQ9 185 aa8.37□□□□□ -1.07
PTCD3-207ENST00000467273 CHIC2Q9UKJ5 165 aa8.37□□□□□ -1.07
PTCD3-207ENST00000467273 PXDNQ92626 1479 aa8.37□□□□□ -1.07
PTCD3-207ENST00000467273 LRPPRCP42704 1394 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms