RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 HSP90AB3PQ58FF7 597 aa7.68□□□□□ -1.18
CXXC4-202ENST00000466963 MORC1Q86VD1 984 aa7.68□□□□□ -1.18
CXXC4-202ENST00000466963 NIM1KQ8IY84 436 aa7.68□□□□□ -1.18
CXXC4-202ENST00000466963 CLEC11AQ9Y240 323 aa7.68□□□□□ -1.18
CXXC4-202ENST00000466963 BBOX1O75936 387 aa7.67□□□□□ -1.18
CXXC4-202ENST00000466963 ZNF790Q6PG37 636 aa7.67□□□□□ -1.18
CXXC4-202ENST00000466963 NBPF5PQ86XG9 351 aaPredicted RBP7.67□□□□□ -1.18
CXXC4-202ENST00000466963 SYNE4Q8N205 404 aa7.67□□□□□ -1.18
CXXC4-202ENST00000466963 ZBTB1Q9Y2K1 713 aa7.67□□□□□ -1.18
CXXC4-202ENST00000466963 PAPPA2Q9BXP8 1791 aa7.67□□□□□ -1.18
CXXC4-202ENST00000466963 NPHP1O15259 732 aa7.67□□□□□ -1.18
CXXC4-202ENST00000466963 PTCD1O75127 700 aaKnown RBP7.67□□□□□ -1.18
CXXC4-202ENST00000466963 DDNO94850 711 aaPredicted RBP7.67□□□□□ -1.18
CXXC4-202ENST00000466963 SNRPA1P09661 255 aaKnown RBP7.67□□□□□ -1.18
CXXC4-202ENST00000466963 MCOLN1Q9GZU1 580 aa7.67□□□□□ -1.18
CXXC4-202ENST00000466963 LRRC37AA6NMS7 1700 aa7.67□□□□□ -1.18
CXXC4-202ENST00000466963 ALDH1A1P00352 501 aa7.67□□□□□ -1.18
CXXC4-202ENST00000466963 SLC10A5Q5PT55 438 aa7.67□□□□□ -1.18
CXXC4-202ENST00000466963 TBC1D9BQ66K14 1250 aa7.66□□□□□ -1.18
CXXC4-202ENST00000466963 KNSTRNQ9Y448 316 aa7.66□□□□□ -1.18
CXXC4-202ENST00000466963 AKAP11Q9UKA4 1901 aa7.66□□□□□ -1.18
CXXC4-202ENST00000466963 SULT6B1Q6IMI4 303 aa7.66□□□□□ -1.18
CXXC4-202ENST00000466963 DZIP3Q86Y13 1208 aaKnown RBP7.66□□□□□ -1.18
CXXC4-202ENST00000466963 GPRC5DQ9NZD1 345 aa7.66□□□□□ -1.18
CXXC4-202ENST00000466963 ZNRF3Q9ULT6 936 aa7.66□□□□□ -1.18
CXXC4-202ENST00000466963 CCDC85CA6NKD9 419 aa7.65□□□□□ -1.18
CXXC4-202ENST00000466963 PPP1R42Q7Z4L9 355 aa7.65□□□□□ -1.18
CXXC4-202ENST00000466963 SAPCD2Q86UD0 394 aa7.65□□□□□ -1.18
CXXC4-202ENST00000466963 DIAPH1O60610 1272 aaKnown RBP7.65□□□□□ -1.18
CXXC4-202ENST00000466963 INHBEP58166 350 aa7.65□□□□□ -1.18
CXXC4-202ENST00000466963 C2orf69Q8N8R5 385 aa7.65□□□□□ -1.18
CXXC4-202ENST00000466963 PPM1GO15355 546 aaPredicted RBP7.65□□□□□ -1.19
CXXC4-202ENST00000466963 CFAP53Q96M91 514 aa7.65□□□□□ -1.19
CXXC4-202ENST00000466963 NUDCQ9Y266 331 aa7.65□□□□□ -1.19
CXXC4-202ENST00000466963 H7C1D1 291 aa7.64□□□□□ -1.19
CXXC4-202ENST00000466963 HTRA3P83110 453 aa7.64□□□□□ -1.19
CXXC4-202ENST00000466963 DGKZQ13574 1117 aa7.64□□□□□ -1.19
CXXC4-202ENST00000466963 SP8Q8IXZ3 490 aa7.64□□□□□ -1.19
CXXC4-202ENST00000466963 RPGRQ92834 1020 aaKnown RBP7.64□□□□□ -1.19
CXXC4-202ENST00000466963 ATP6V0A2Q9Y487 856 aa7.64□□□□□ -1.19
CXXC4-202ENST00000466963 EAPPQ56P03 285 aaPredicted RBP7.63□□□□□ -1.19
CXXC4-202ENST00000466963 BICDL1Q6ZP65 573 aa7.63□□□□□ -1.19
CXXC4-202ENST00000466963 EYA3Q99504 573 aa7.63□□□□□ -1.19
CXXC4-202ENST00000466963 COL3A1P02461 1466 aaPredicted RBP7.63□□□□□ -1.19
CXXC4-202ENST00000466963 SREBF2Q12772 1141 aa7.63□□□□□ -1.19
CXXC4-202ENST00000466963 CACNA1SQ13698 1873 aa7.63□□□□□ -1.19
CXXC4-202ENST00000466963 RGMBQ6NW40 437 aa7.63□□□□□ -1.19
CXXC4-202ENST00000466963 ZNF541Q9H0D2 1346 aa7.63□□□□□ -1.19
CXXC4-202ENST00000466963 A0A1W2PPC1 479 aa7.63□□□□□ -1.19
CXXC4-202ENST00000466963 CIAPIN1Q6FI81 312 aa7.63□□□□□ -1.19
CXXC4-202ENST00000466963 KIF6Q6ZMV9 814 aa7.63□□□□□ -1.19
CXXC4-202ENST00000466963 SLC10A3P09131 477 aa7.62□□□□□ -1.19
CXXC4-202ENST00000466963 FBXO46Q6PJ61 603 aaPredicted RBP7.62□□□□□ -1.19
CXXC4-202ENST00000466963 LARGE2Q8N3Y3 721 aa7.62□□□□□ -1.19
CXXC4-202ENST00000466963 PSME4Q14997 1843 aa7.62□□□□□ -1.19
CXXC4-202ENST00000466963 KIAA2012Q0VF49 1180 aa7.62□□□□□ -1.19
CXXC4-202ENST00000466963 LAMB2P55268 1798 aa7.62□□□□□ -1.19
CXXC4-202ENST00000466963 KDM3BQ7LBC6 1761 aa7.62□□□□□ -1.19
CXXC4-202ENST00000466963 CANXP27824 592 aaKnown RBP7.61□□□□□ -1.19
CXXC4-202ENST00000466963 SCNN1DP51172 638 aa7.61□□□□□ -1.19
CXXC4-202ENST00000466963 PRMT2P55345 433 aa7.61□□□□□ -1.19
CXXC4-202ENST00000466963 PPEF1O14829 653 aaPredicted RBP7.61□□□□□ -1.19
CXXC4-202ENST00000466963 NEFMP07197 916 aa7.61□□□□□ -1.19
CXXC4-202ENST00000466963 MAP3K15Q6ZN16 1313 aa7.61□□□□□ -1.19
CXXC4-202ENST00000466963 MYO3BQ8WXR4 1341 aa7.61□□□□□ -1.19
CXXC4-202ENST00000466963 RTF1Q92541 710 aaKnown RBP7.61□□□□□ -1.19
CXXC4-202ENST00000466963 NUP98P52948 1817 aa7.6□□□□□ -1.19
CXXC4-202ENST00000466963 GNRH1P01148 92 aa7.6□□□□□ -1.19
CXXC4-202ENST00000466963 AMER1Q5JTC6 1135 aaPredicted RBP7.6□□□□□ -1.19
CXXC4-202ENST00000466963 AGBL3Q8NEM8 1001 aa7.6□□□□□ -1.19
CXXC4-202ENST00000466963 NLRP3Q96P20 1036 aa7.6□□□□□ -1.19
CXXC4-202ENST00000466963 ZCCHC17Q9NP64 241 aaKnown RBP7.6□□□□□ -1.19
CXXC4-202ENST00000466963 PPP2R3BQ9Y5P8 575 aa7.6□□□□□ -1.19
CXXC4-202ENST00000466963 CELF2O95319 508 aaKnown RBP7.6□□□□□ -1.19
CXXC4-202ENST00000466963 GTF2E1P29083 439 aaPredicted RBP7.6□□□□□ -1.19
CXXC4-202ENST00000466963 GPR153Q6NV75 609 aa7.6□□□□□ -1.19
CXXC4-202ENST00000466963 DCPSQ96C86 337 aaKnown RBP7.6□□□□□ -1.19
CXXC4-202ENST00000466963 GBA2Q9HCG7 927 aaPredicted RBP7.6□□□□□ -1.19
CXXC4-202ENST00000466963 NIP7Q9Y221 180 aaKnown RBP eCLIP7.6□□□□□ -1.19
CXXC4-202ENST00000466963 BTBD11A6QL63 1104 aa7.59□□□□□ -1.19
CXXC4-202ENST00000466963 FBLN1P23142 703 aa7.59□□□□□ -1.19
CXXC4-202ENST00000466963 TM4SF4P48230 202 aa7.59□□□□□ -1.19
CXXC4-202ENST00000466963 MTHFSDQ2M296 383 aaKnown RBP7.59□□□□□ -1.19
CXXC4-202ENST00000466963 CST9Q5W186 159 aa7.59□□□□□ -1.19
CXXC4-202ENST00000466963 HOXB7P09629 217 aa7.59□□□□□ -1.19
CXXC4-202ENST00000466963 MAP1SQ66K74 1059 aaPredicted RBP7.58□□□□□ -1.2
CXXC4-202ENST00000466963 ZNF34Q8IZ26 560 aa7.58□□□□□ -1.2
CXXC4-202ENST00000466963 PANK3Q9H999 370 aa7.58□□□□□ -1.2
CXXC4-202ENST00000466963 NF2P35240 595 aa7.58□□□□□ -1.2
CXXC4-202ENST00000466963 ZNF277Q9NRM2 450 aaPredicted RBP7.58□□□□□ -1.2
CXXC4-202ENST00000466963 PPIP5K2O43314 1243 aa7.58□□□□□ -1.2
CXXC4-202ENST00000466963 TAF7Q15545 349 aaPredicted RBP7.58□□□□□ -1.2
CXXC4-202ENST00000466963 ZNF646O15015 1829 aaPredicted RBP7.58□□□□□ -1.2
CXXC4-202ENST00000466963 FAM155AB1AL88 458 aaPredicted RBP7.57□□□□□ -1.2
CXXC4-202ENST00000466963 ZNF280AP59817 542 aaPredicted RBP7.57□□□□□ -1.2
CXXC4-202ENST00000466963 LMOD3Q0VAK6 560 aa7.57□□□□□ -1.2
CXXC4-202ENST00000466963 OTUD7BQ6GQQ9 843 aa7.57□□□□□ -1.2
CXXC4-202ENST00000466963 CYP4F22Q6NT55 531 aa7.57□□□□□ -1.2
CXXC4-202ENST00000466963 GIGYF2Q6Y7W6 1299 aaKnown RBP7.57□□□□□ -1.2
CXXC4-202ENST00000466963 BCL2L13Q9BXK5 485 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms