RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 TGFBR3LH3BV60 316 aa6.76□□□□□ -1.33
GTF3C3-209ENST00000466862 PIK3R2O00459 728 aa6.76□□□□□ -1.33
GTF3C3-209ENST00000466862 LGR5O75473 907 aa6.76□□□□□ -1.33
GTF3C3-209ENST00000466862 ALBP02768 609 aa6.76□□□□□ -1.33
GTF3C3-209ENST00000466862 FURINP09958 794 aa6.76□□□□□ -1.33
GTF3C3-209ENST00000466862 WEE1P30291 646 aa6.76□□□□□ -1.33
GTF3C3-209ENST00000466862 CHRNA4P43681 627 aa6.76□□□□□ -1.33
GTF3C3-209ENST00000466862 CEP63Q96MT8 703 aa6.76□□□□□ -1.33
GTF3C3-209ENST00000466862 QTRT2Q9H974 415 aaKnown RBP6.76□□□□□ -1.33
GTF3C3-209ENST00000466862 PRDM6Q9NQX0 595 aa6.76□□□□□ -1.33
GTF3C3-209ENST00000466862 RBM19Q9Y4C8 960 aaKnown RBP6.76□□□□□ -1.33
GTF3C3-209ENST00000466862 K7ELQ4 463 aaPredicted RBP6.75□□□□□ -1.33
GTF3C3-209ENST00000466862 ADH7P40394 386 aa6.75□□□□□ -1.33
GTF3C3-209ENST00000466862 BAG6P46379 1132 aa6.75□□□□□ -1.33
GTF3C3-209ENST00000466862 CD163Q86VB7 1156 aa6.75□□□□□ -1.33
GTF3C3-209ENST00000466862 NGLY1Q96IV0 654 aa6.75□□□□□ -1.33
GTF3C3-209ENST00000466862 VRTNQ9H8Y1 702 aa6.75□□□□□ -1.33
GTF3C3-209ENST00000466862 KCNH4Q9UQ05 1017 aa6.75□□□□□ -1.33
GTF3C3-209ENST00000466862 C1QTNF9BB2RNN3 333 aa6.74□□□□□ -1.33
GTF3C3-209ENST00000466862 FOXO3O43524 673 aa6.74□□□□□ -1.33
GTF3C3-209ENST00000466862 HIF1AQ16665 826 aa6.74□□□□□ -1.33
GTF3C3-209ENST00000466862 C20orf204Q6ZNR8 217 aa6.74□□□□□ -1.33
GTF3C3-209ENST00000466862 CHMP7Q8WUX9 453 aaPredicted RBP6.74□□□□□ -1.33
GTF3C3-209ENST00000466862 KRTAP4-8Q9BYQ9 185 aa6.74□□□□□ -1.33
GTF3C3-209ENST00000466862 NEUROD4Q9HD90 331 aa6.74□□□□□ -1.33
GTF3C3-209ENST00000466862 ZMIZ1Q9ULJ6 1067 aa6.74□□□□□ -1.33
GTF3C3-209ENST00000466862 NID1P14543 1247 aa6.73□□□□□ -1.33
GTF3C3-209ENST00000466862 MYO19Q96H55 970 aa6.73□□□□□ -1.33
GTF3C3-209ENST00000466862 M0R082 166 aa6.72□□□□□ -1.33
GTF3C3-209ENST00000466862 SRPK2P78362 688 aaKnown RBP6.72□□□□□ -1.33
GTF3C3-209ENST00000466862 C8orf86Q6ZUL3 223 aa6.72□□□□□ -1.33
GTF3C3-209ENST00000466862 MICALL1Q8N3F8 863 aa6.72□□□□□ -1.33
GTF3C3-209ENST00000466862 Q8N3U1 123 aa6.72□□□□□ -1.33
GTF3C3-209ENST00000466862 ZNF417Q8TAU3 575 aa6.72□□□□□ -1.33
GTF3C3-209ENST00000466862 ZNF587Q96SQ5 575 aaPredicted RBP6.72□□□□□ -1.33
GTF3C3-209ENST00000466862 HINFPQ9BQA5 517 aa6.72□□□□□ -1.33
GTF3C3-209ENST00000466862 PLVAPQ9BX97 442 aa6.72□□□□□ -1.33
GTF3C3-209ENST00000466862 NAGPAQ9UK23 515 aa6.72□□□□□ -1.33
GTF3C3-209ENST00000466862 ZNF777Q9ULD5 760 aaPredicted RBP6.72□□□□□ -1.33
GTF3C3-209ENST00000466862 SPATA31C1P0DKV0 1188 aa6.71□□□□□ -1.34
GTF3C3-209ENST00000466862 INPP5BP32019 993 aa6.71□□□□□ -1.34
GTF3C3-209ENST00000466862 FAM69CQ0P6D2 419 aa6.71□□□□□ -1.34
GTF3C3-209ENST00000466862 BHMTQ93088 406 aa6.71□□□□□ -1.34
GTF3C3-209ENST00000466862 GSX2Q9BZM3 304 aa6.71□□□□□ -1.34
GTF3C3-209ENST00000466862 KLK14Q9P0G3 267 aa6.71□□□□□ -1.34
GTF3C3-209ENST00000466862 ALAS2P22557 587 aa6.7□□□□□ -1.34
GTF3C3-209ENST00000466862 FKBP5Q13451 457 aaPredicted RBP6.7□□□□□ -1.34
GTF3C3-209ENST00000466862 OCLNQ16625 522 aa6.7□□□□□ -1.34
GTF3C3-209ENST00000466862 EFCC1Q9HA90 598 aa6.7□□□□□ -1.34
GTF3C3-209ENST00000466862 SLC6A14Q9UN76 642 aa6.7□□□□□ -1.34
GTF3C3-209ENST00000466862 NOVA2Q9UNW9 492 aaKnown RBP6.7□□□□□ -1.34
GTF3C3-209ENST00000466862 ITGB7P26010 798 aa6.69□□□□□ -1.34
GTF3C3-209ENST00000466862 IDH3AP50213 366 aa6.69□□□□□ -1.34
GTF3C3-209ENST00000466862 NEUROD1Q13562 356 aa6.69□□□□□ -1.34
GTF3C3-209ENST00000466862 ELOAQ14241 798 aaKnown RBP6.69□□□□□ -1.34
GTF3C3-209ENST00000466862 ILDR2Q71H61 639 aa6.69□□□□□ -1.34
GTF3C3-209ENST00000466862 LRFN2Q9ULH4 789 aa6.69□□□□□ -1.34
GTF3C3-209ENST00000466862 DGKZQ13574 1117 aa6.68□□□□□ -1.34
GTF3C3-209ENST00000466862 SWI5Q1ZZU3 235 aa6.68□□□□□ -1.34
GTF3C3-209ENST00000466862 STK32AQ8WU08 396 aa6.68□□□□□ -1.34
GTF3C3-209ENST00000466862 ACIN1Q9UKV3 1341 aaKnown RBP6.68□□□□□ -1.34
GTF3C3-209ENST00000466862 NFKB1P19838 968 aa6.67□□□□□ -1.34
GTF3C3-209ENST00000466862 FAM200AQ8TCP9 573 aa6.67□□□□□ -1.34
GTF3C3-209ENST00000466862 UBE2OQ9C0C9 1292 aaKnown RBP6.67□□□□□ -1.34
GTF3C3-209ENST00000466862 DNAJB12Q9NXW2 375 aaKnown RBP6.67□□□□□ -1.34
GTF3C3-209ENST00000466862 ZFATQ9P243 1243 aa6.67□□□□□ -1.34
GTF3C3-209ENST00000466862 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.67□□□□□ -1.34
GTF3C3-209ENST00000466862 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.66□□□□□ -1.34
GTF3C3-209ENST00000466862 FAM229AH3BQW9 127 aa6.66□□□□□ -1.34
GTF3C3-209ENST00000466862 ARSDP51689 593 aa6.66□□□□□ -1.34
GTF3C3-209ENST00000466862 CCINQ13939 588 aa6.66□□□□□ -1.34
GTF3C3-209ENST00000466862 CDCA8Q53HL2 280 aa6.66□□□□□ -1.34
GTF3C3-209ENST00000466862 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.65□□□□□ -1.34
GTF3C3-209ENST00000466862 MAP3K6O95382 1288 aa6.65□□□□□ -1.34
GTF3C3-209ENST00000466862 EPB42P16452 691 aa6.65□□□□□ -1.34
GTF3C3-209ENST00000466862 FAM26DQ5JW98 314 aa6.65□□□□□ -1.34
GTF3C3-209ENST00000466862 C11orf16Q9NQ32 467 aa6.65□□□□□ -1.34
GTF3C3-209ENST00000466862 SPDYE3A6NKU9 549 aa6.64□□□□□ -1.35
GTF3C3-209ENST00000466862 OPLAHO14841 1288 aa6.64□□□□□ -1.35
GTF3C3-209ENST00000466862 MICAL2O94851 1124 aa6.64□□□□□ -1.35
GTF3C3-209ENST00000466862 RFX1P22670 979 aa6.64□□□□□ -1.35
GTF3C3-209ENST00000466862 GRIK5Q16478 980 aa6.64□□□□□ -1.35
GTF3C3-209ENST00000466862 C11orf91Q3C1V1 193 aa6.64□□□□□ -1.35
GTF3C3-209ENST00000466862 COX20Q5RI15 118 aa6.64□□□□□ -1.35
GTF3C3-209ENST00000466862 IFT43Q96FT9 208 aa6.64□□□□□ -1.35
GTF3C3-209ENST00000466862 KRTAP9-2Q9BYQ4 174 aa6.64□□□□□ -1.35
GTF3C3-209ENST00000466862 ZBTB42B2RXF5 422 aa6.63□□□□□ -1.35
GTF3C3-209ENST00000466862 TNFRSF10BO14763 440 aa6.63□□□□□ -1.35
GTF3C3-209ENST00000466862 LILRB5O75023 590 aa6.63□□□□□ -1.35
GTF3C3-209ENST00000466862 ATG7O95352 703 aa6.63□□□□□ -1.35
GTF3C3-209ENST00000466862 EGFRP00533 1210 aa6.63□□□□□ -1.35
GTF3C3-209ENST00000466862 AFF1P51825 1210 aaKnown RBP6.63□□□□□ -1.35
GTF3C3-209ENST00000466862 TBC1D8BQ0IIM8 1120 aa6.63□□□□□ -1.35
GTF3C3-209ENST00000466862 PRRT3Q5FWE3 981 aa6.63□□□□□ -1.35
GTF3C3-209ENST00000466862 PSAPL1Q6NUJ1 521 aa6.63□□□□□ -1.35
GTF3C3-209ENST00000466862 TRPM4Q8TD43 1214 aa6.63□□□□□ -1.35
GTF3C3-209ENST00000466862 COL26A1Q96A83 441 aa6.63□□□□□ -1.35
GTF3C3-209ENST00000466862 PSMG3-AS1Q96PY0 264 aa6.63□□□□□ -1.35
GTF3C3-209ENST00000466862 LPIN3Q9BQK8 851 aa6.63□□□□□ -1.35
GTF3C3-209ENST00000466862 CXXC1Q9P0U4 656 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms