RNA–Protein interactions for RNA: ENST00000466822.1

ABCD4-204, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-204ENST00000466822 TRMT112Q9UI30 125 aaKnown RBP18.46■□□□□ 0.55
ABCD4-204ENST00000466822 SH3TC1Q8TE82 1336 aa18.46■□□□□ 0.55
ABCD4-204ENST00000466822 GOLGB1Q14789 3259 aaKnown RBP18.45■□□□□ 0.54
ABCD4-204ENST00000466822 HOXA10P31260 410 aaPredicted RBP18.45■□□□□ 0.54
ABCD4-204ENST00000466822 ERFEQ4G0M1 354 aa18.45■□□□□ 0.54
ABCD4-204ENST00000466822 GRIPAP1Q4V328 841 aa18.45■□□□□ 0.54
ABCD4-204ENST00000466822 CCDC191Q8NCU4 936 aa18.45■□□□□ 0.54
ABCD4-204ENST00000466822 METTL22Q9BUU2 404 aaPredicted RBP18.45■□□□□ 0.54
ABCD4-204ENST00000466822 KIAA1551Q9HCM1 1747 aa18.45■□□□□ 0.54
ABCD4-204ENST00000466822 NUP98P52948 1817 aa18.44■□□□□ 0.54
ABCD4-204ENST00000466822 CT47B1P0C2W7 299 aaPredicted RBP18.44■□□□□ 0.54
ABCD4-204ENST00000466822 NEXNQ0ZGT2 675 aa18.44■□□□□ 0.54
ABCD4-204ENST00000466822 CCDC24Q8N4L8 307 aa18.44■□□□□ 0.54
ABCD4-204ENST00000466822 CC2D2BQ6DHV5 1058 aa18.43■□□□□ 0.54
ABCD4-204ENST00000466822 NUTM1Q86Y26 1132 aa18.43■□□□□ 0.54
ABCD4-204ENST00000466822 WWC3Q9ULE0 1092 aa18.43■□□□□ 0.54
ABCD4-204ENST00000466822 N4BP2Q86UW6 1770 aaPredicted RBP18.42■□□□□ 0.54
ABCD4-204ENST00000466822 PI4KAP2A4QPH2 592 aa18.42■□□□□ 0.54
ABCD4-204ENST00000466822 FLIIQ13045 1269 aa18.42■□□□□ 0.54
ABCD4-204ENST00000466822 TRMT2AQ8IZ69 625 aaKnown RBP18.42■□□□□ 0.54
ABCD4-204ENST00000466822 PI4KAP1Q8N8J0 262 aa18.42■□□□□ 0.54
ABCD4-204ENST00000466822 RPGRQ92834 1020 aaKnown RBP18.42■□□□□ 0.54
ABCD4-204ENST00000466822 RBM17Q96I25 401 aaKnown RBP18.42■□□□□ 0.54
ABCD4-204ENST00000466822 CRAMP1Q96RY5 1269 aa18.42■□□□□ 0.54
ABCD4-204ENST00000466822 CHD4Q14839 1912 aa18.41■□□□□ 0.54
ABCD4-204ENST00000466822 ZBTB38Q8NAP3 1195 aaPredicted RBP18.41■□□□□ 0.54
ABCD4-204ENST00000466822 PRPF40BQ6NWY9 871 aaKnown RBP18.4■□□□□ 0.54
ABCD4-204ENST00000466822 TMX4Q9H1E5 349 aaPredicted RBP18.4■□□□□ 0.54
ABCD4-204ENST00000466822 CWC25Q9NXE8 425 aaPredicted RBP18.4■□□□□ 0.54
ABCD4-204ENST00000466822 MAP3K2Q9Y2U5 619 aa18.4■□□□□ 0.54
ABCD4-204ENST00000466822 BRCA1P38398 1863 aaKnown RBP18.39■□□□□ 0.54
ABCD4-204ENST00000466822 ATP5J2-PTCD1G3V325 749 aa18.39■□□□□ 0.53
ABCD4-204ENST00000466822 PCCAP05165 728 aaPredicted RBP18.39■□□□□ 0.53
ABCD4-204ENST00000466822 RTKN2Q8IZC4 609 aa18.39■□□□□ 0.53
ABCD4-204ENST00000466822 C7orf43Q8WVR3 580 aa18.39■□□□□ 0.53
ABCD4-204ENST00000466822 MYD88Q99836 296 aa18.39■□□□□ 0.53
ABCD4-204ENST00000466822 LTBP3Q9NS15 1303 aa18.39■□□□□ 0.53
ABCD4-204ENST00000466822 ZC3H4Q9UPT8 1303 aaKnown RBP18.39■□□□□ 0.53
ABCD4-204ENST00000466822 ABCC12Q96J65 1359 aa18.39■□□□□ 0.53
ABCD4-204ENST00000466822 ARFGEF1Q9Y6D6 1849 aa18.38■□□□□ 0.53
ABCD4-204ENST00000466822 C21orf2O43822 256 aa18.38■□□□□ 0.53
ABCD4-204ENST00000466822 BBOX1O75936 387 aa18.38■□□□□ 0.53
ABCD4-204ENST00000466822 LMNB1P20700 586 aa18.38■□□□□ 0.53
ABCD4-204ENST00000466822 FKBP5Q13451 457 aaPredicted RBP18.38■□□□□ 0.53
ABCD4-204ENST00000466822 TMC4Q7Z404 712 aa18.38■□□□□ 0.53
ABCD4-204ENST00000466822 SF3B3Q15393 1217 aaKnown RBP18.37■□□□□ 0.53
ABCD4-204ENST00000466822 ALDH1L2Q3SY69 923 aa18.37■□□□□ 0.53
ABCD4-204ENST00000466822 CCDC93Q567U6 631 aa18.37■□□□□ 0.53
ABCD4-204ENST00000466822 LINS1Q8NG48 757 aa18.37■□□□□ 0.53
ABCD4-204ENST00000466822 DNAAF4Q8WXU2 420 aa18.37■□□□□ 0.53
ABCD4-204ENST00000466822 DLEC1Q9Y238 1755 aa18.37■□□□□ 0.53
ABCD4-204ENST00000466822 ANKRD31Q8N7Z5 1873 aa18.37■□□□□ 0.53
ABCD4-204ENST00000466822 CACNA1FO60840 1977 aa18.37■□□□□ 0.53
ABCD4-204ENST00000466822 TCERG1O14776 1098 aaKnown RBP18.36■□□□□ 0.53
ABCD4-204ENST00000466822 DDX46Q7L014 1031 aaKnown RBP18.36■□□□□ 0.53
ABCD4-204ENST00000466822 G2E3Q7L622 706 aa18.36■□□□□ 0.53
ABCD4-204ENST00000466822 ZNF784Q8NCA9 323 aaPredicted RBP18.36■□□□□ 0.53
ABCD4-204ENST00000466822 FAM89AQ96GI7 184 aa18.36■□□□□ 0.53
ABCD4-204ENST00000466822 ADCY9O60503 1353 aa18.35■□□□□ 0.53
ABCD4-204ENST00000466822 IRS4O14654 1257 aaPredicted RBP18.35■□□□□ 0.53
ABCD4-204ENST00000466822 C9orf131Q5VYM1 1079 aa18.35■□□□□ 0.53
ABCD4-204ENST00000466822 CDHR2Q9BYE9 1310 aa18.34■□□□□ 0.53
ABCD4-204ENST00000466822 HCLS1P14317 486 aaPredicted RBP18.34■□□□□ 0.53
ABCD4-204ENST00000466822 CDCA7LQ96GN5 454 aa18.34■□□□□ 0.53
ABCD4-204ENST00000466822 TAOK3Q9H2K8 898 aa18.34■□□□□ 0.53
ABCD4-204ENST00000466822 ANKRD36CQ5JPF3 1778 aa18.33■□□□□ 0.53
ABCD4-204ENST00000466822 PTPRCP08575 1304 aa18.33■□□□□ 0.53
ABCD4-204ENST00000466822 NEURL1BA8MQ27 555 aa18.33■□□□□ 0.52
ABCD4-204ENST00000466822 PDE8AO60658 829 aa18.33■□□□□ 0.52
ABCD4-204ENST00000466822 IGKV5-2P06315 115 aa18.33■□□□□ 0.52
ABCD4-204ENST00000466822 VPS33BQ9H267 617 aa18.33■□□□□ 0.52
ABCD4-204ENST00000466822 NFKBIEO00221 500 aa18.32■□□□□ 0.52
ABCD4-204ENST00000466822 HNRNPUQ00839 825 aaKnown RBP eCLIP18.32■□□□□ 0.52
ABCD4-204ENST00000466822 PSMD1Q99460 953 aa18.32■□□□□ 0.52
ABCD4-204ENST00000466822 RNF181Q9P0P0 153 aa18.32■□□□□ 0.52
ABCD4-204ENST00000466822 H7C1W4 665 aa18.31■□□□□ 0.52
ABCD4-204ENST00000466822 PPEF1O14829 653 aaPredicted RBP18.31■□□□□ 0.52
ABCD4-204ENST00000466822 BRPF1P55201 1214 aaPredicted RBP18.31■□□□□ 0.52
ABCD4-204ENST00000466822 FKBP4Q02790 459 aaKnown RBP eCLIP18.31■□□□□ 0.52
ABCD4-204ENST00000466822 GRAPQ13588 217 aa18.31■□□□□ 0.52
ABCD4-204ENST00000466822 GCKRQ14397 625 aa18.31■□□□□ 0.52
ABCD4-204ENST00000466822 CCDC152Q4G0S7 254 aa18.31■□□□□ 0.52
ABCD4-204ENST00000466822 SP8Q8IXZ3 490 aa18.31■□□□□ 0.52
ABCD4-204ENST00000466822 SYNE4Q8N205 404 aa18.31■□□□□ 0.52
ABCD4-204ENST00000466822 MRPL50Q8N5N7 158 aaKnown RBP18.31■□□□□ 0.52
ABCD4-204ENST00000466822 GRAPLQ8TC17 118 aaPredicted RBP18.31■□□□□ 0.52
ABCD4-204ENST00000466822 ATP6V0A2Q9Y487 856 aa18.31■□□□□ 0.52
ABCD4-204ENST00000466822 ALDH1L1O75891 902 aa18.3■□□□□ 0.52
ABCD4-204ENST00000466822 C3orf67Q6ZVT6 689 aa18.3■□□□□ 0.52
ABCD4-204ENST00000466822 ZNF219Q9P2Y4 722 aaPredicted RBP18.3■□□□□ 0.52
ABCD4-204ENST00000466822 ABCC4O15439 1325 aa18.29■□□□□ 0.52
ABCD4-204ENST00000466822 BEND3Q5T5X7 828 aa18.29■□□□□ 0.52
ABCD4-204ENST00000466822 SUPT20HQ8NEM7 779 aa18.29■□□□□ 0.52
ABCD4-204ENST00000466822 SSH1Q8WYL5 1049 aa18.29■□□□□ 0.52
ABCD4-204ENST00000466822 PLA2G12BQ9BX93 195 aa18.29■□□□□ 0.52
ABCD4-204ENST00000466822 GPBP1L1Q9HC44 474 aaPredicted RBP18.29■□□□□ 0.52
ABCD4-204ENST00000466822 ARFGEF2Q9Y6D5 1785 aa18.29■□□□□ 0.52
ABCD4-204ENST00000466822 KDM2BQ8NHM5 1336 aa18.28■□□□□ 0.52
ABCD4-204ENST00000466822 RASSF7Q02833 373 aa18.28■□□□□ 0.52
ABCD4-204ENST00000466822 CWF19L2Q2TBE0 894 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms