RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 COL15A1P39059 1388 aa18.86■□□□□ 0.61
SNED1-208ENST00000466618 MSNP26038 577 aaKnown RBP18.85■□□□□ 0.61
SNED1-208ENST00000466618 FKBP5Q13451 457 aaPredicted RBP18.85■□□□□ 0.61
SNED1-208ENST00000466618 SMIM5Q71RC9 77 aa18.85■□□□□ 0.61
SNED1-208ENST00000466618 ADCY9O60503 1353 aa18.85■□□□□ 0.61
SNED1-208ENST00000466618 IBTKQ9P2D0 1353 aaPredicted RBP18.85■□□□□ 0.61
SNED1-208ENST00000466618 MVPQ14764 893 aaKnown RBP18.84■□□□□ 0.61
SNED1-208ENST00000466618 ANKRD13DQ6ZTN6 518 aa18.84■□□□□ 0.61
SNED1-208ENST00000466618 FAM13BQ9NYF5 915 aa18.84■□□□□ 0.61
SNED1-208ENST00000466618 ZNF330Q9Y3S2 320 aaPredicted RBP18.84■□□□□ 0.61
SNED1-208ENST00000466618 NUP188Q5SRE5 1749 aa18.84■□□□□ 0.61
SNED1-208ENST00000466618 PI4KAP2A4QPH2 592 aa18.83■□□□□ 0.61
SNED1-208ENST00000466618 ADRA2BP18089 450 aa18.83■□□□□ 0.61
SNED1-208ENST00000466618 SSFA2P28290 1259 aa18.83■□□□□ 0.61
SNED1-208ENST00000466618 KSR2Q6VAB6 950 aa18.83■□□□□ 0.61
SNED1-208ENST00000466618 PI4KAP1Q8N8J0 262 aa18.83■□□□□ 0.61
SNED1-208ENST00000466618 PLBD2Q8NHP8 589 aa18.83■□□□□ 0.61
SNED1-208ENST00000466618 API5Q9BZZ5 524 aaKnown RBP18.83■□□□□ 0.61
SNED1-208ENST00000466618 R3HCC1Q9Y3T6 440 aaKnown RBP18.83■□□□□ 0.61
SNED1-208ENST00000466618 CACNA1FO60840 1977 aa18.83■□□□□ 0.61
SNED1-208ENST00000466618 DDX58O95786 925 aaKnown RBP18.83■□□□□ 0.6
SNED1-208ENST00000466618 SLC15A2Q16348 729 aa18.83■□□□□ 0.6
SNED1-208ENST00000466618 DZIP3Q86Y13 1208 aaKnown RBP18.83■□□□□ 0.6
SNED1-208ENST00000466618 ARHGEF1Q92888 912 aaKnown RBP18.83■□□□□ 0.6
SNED1-208ENST00000466618 A0A087WZG4 1122 aa18.82■□□□□ 0.6
SNED1-208ENST00000466618 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.82■□□□□ 0.6
SNED1-208ENST00000466618 TBC1D2BQ9UPU7 963 aa18.82■□□□□ 0.6
SNED1-208ENST00000466618 ABCC4O15439 1325 aa18.82■□□□□ 0.6
SNED1-208ENST00000466618 MAP3K15Q6ZN16 1313 aa18.82■□□□□ 0.6
SNED1-208ENST00000466618 F6X3S4 739 aa18.82■□□□□ 0.6
SNED1-208ENST00000466618 TRAPPC3LQ5T215 181 aa18.82■□□□□ 0.6
SNED1-208ENST00000466618 ERVV-1B6SEH8 477 aa18.81■□□□□ 0.6
SNED1-208ENST00000466618 CAMTA2O94983 1202 aa18.81■□□□□ 0.6
SNED1-208ENST00000466618 TFCP2L1Q9NZI6 479 aa18.81■□□□□ 0.6
SNED1-208ENST00000466618 SMAP1Q8IYB5 467 aaPredicted RBP18.81■□□□□ 0.6
SNED1-208ENST00000466618 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.81■□□□□ 0.6
SNED1-208ENST00000466618 MAP3K2Q9Y2U5 619 aa18.81■□□□□ 0.6
SNED1-208ENST00000466618 UBR3Q6ZT12 1888 aa18.8■□□□□ 0.6
SNED1-208ENST00000466618 RGL2O15211 777 aa18.8■□□□□ 0.6
SNED1-208ENST00000466618 ZNF500O60304 480 aaPredicted RBP18.8■□□□□ 0.6
SNED1-208ENST00000466618 PHF14O94880 888 aa18.8■□□□□ 0.6
SNED1-208ENST00000466618 HS1BP3Q53T59 392 aa18.8■□□□□ 0.6
SNED1-208ENST00000466618 KIF6Q6ZMV9 814 aa18.8■□□□□ 0.6
SNED1-208ENST00000466618 RIC3Q7Z5B4 369 aa18.8■□□□□ 0.6
SNED1-208ENST00000466618 DNAAF4Q8WXU2 420 aa18.8■□□□□ 0.6
SNED1-208ENST00000466618 ZBTB3Q9H5J0 574 aa18.8■□□□□ 0.6
SNED1-208ENST00000466618 STK32BQ9NY57 414 aa18.8■□□□□ 0.6
SNED1-208ENST00000466618 NARFQ9UHQ1 456 aa18.8■□□□□ 0.6
SNED1-208ENST00000466618 DZIP1LQ8IYY4 767 aaKnown RBP18.79■□□□□ 0.6
SNED1-208ENST00000466618 PNPLA7Q6ZV29 1317 aa18.79■□□□□ 0.6
SNED1-208ENST00000466618 HDAC1Q13547 482 aaPredicted RBP18.79■□□□□ 0.6
SNED1-208ENST00000466618 HLFQ16534 295 aa18.79■□□□□ 0.6
SNED1-208ENST00000466618 KLHL40Q2TBA0 621 aa18.79■□□□□ 0.6
SNED1-208ENST00000466618 GIGYF2Q6Y7W6 1299 aaKnown RBP18.79■□□□□ 0.6
SNED1-208ENST00000466618 KIF2CQ99661 725 aa18.79■□□□□ 0.6
SNED1-208ENST00000466618 NOL7Q9UMY1 257 aaKnown RBP18.79■□□□□ 0.6
SNED1-208ENST00000466618 USP42Q9H9J4 1324 aaKnown RBP18.78■□□□□ 0.6
SNED1-208ENST00000466618 UQCRHLA0A096LP55 91 aa18.78■□□□□ 0.6
SNED1-208ENST00000466618 CD2BP2O95400 341 aaKnown RBP18.78■□□□□ 0.6
SNED1-208ENST00000466618 UQCRHP07919 91 aa18.78■□□□□ 0.6
SNED1-208ENST00000466618 FLAD1Q8NFF5 587 aa18.78■□□□□ 0.6
SNED1-208ENST00000466618 ANP32BQ92688 251 aaKnown RBP18.78■□□□□ 0.6
SNED1-208ENST00000466618 METTL22Q9BUU2 404 aaPredicted RBP18.78■□□□□ 0.6
SNED1-208ENST00000466618 BCL2L12Q9HB09 334 aa18.78■□□□□ 0.6
SNED1-208ENST00000466618 BEND3Q5T5X7 828 aa18.78■□□□□ 0.6
SNED1-208ENST00000466618 INTS3Q68E01 1043 aaKnown RBP18.78■□□□□ 0.6
SNED1-208ENST00000466618 CLEC17AQ6ZS10 378 aa18.78■□□□□ 0.6
SNED1-208ENST00000466618 PXDNLA1KZ92 1463 aa18.77■□□□□ 0.6
SNED1-208ENST00000466618 ATP10DQ9P241 1426 aa18.77■□□□□ 0.6
SNED1-208ENST00000466618 RFC4P35249 363 aa18.77■□□□□ 0.6
SNED1-208ENST00000466618 COL23A1Q86Y22 540 aaPredicted RBP18.77■□□□□ 0.6
SNED1-208ENST00000466618 SRP68Q9UHB9 627 aaKnown RBP18.77■□□□□ 0.6
SNED1-208ENST00000466618 CLEC4GQ6UXB4 293 aa18.76■□□□□ 0.59
SNED1-208ENST00000466618 ZNF445P59923 1031 aa18.76■□□□□ 0.59
SNED1-208ENST00000466618 TCIRG1Q13488 830 aa18.76■□□□□ 0.59
SNED1-208ENST00000466618 USPL1Q5W0Q7 1092 aa18.76■□□□□ 0.59
SNED1-208ENST00000466618 TMEM57Q8N5G2 664 aa18.76■□□□□ 0.59
SNED1-208ENST00000466618 PDLIM2Q96JY6 352 aa18.76■□□□□ 0.59
SNED1-208ENST00000466618 FOXD4L1Q9NU39 408 aa18.76■□□□□ 0.59
SNED1-208ENST00000466618 IGKV5-2P06315 115 aa18.75■□□□□ 0.59
SNED1-208ENST00000466618 FTSJ3Q8IY81 847 aaKnown RBP18.75■□□□□ 0.59
SNED1-208ENST00000466618 ZPR1O75312 459 aa18.75■□□□□ 0.59
SNED1-208ENST00000466618 SLC4A10Q6U841 1118 aa18.75■□□□□ 0.59
SNED1-208ENST00000466618 LINS1Q8NG48 757 aa18.75■□□□□ 0.59
SNED1-208ENST00000466618 C4AP0C0L4 1744 aa18.74■□□□□ 0.59
SNED1-208ENST00000466618 CCT4P50991 539 aaKnown RBP18.74■□□□□ 0.59
SNED1-208ENST00000466618 TRIM28Q13263 835 aaKnown RBP18.74■□□□□ 0.59
SNED1-208ENST00000466618 MYD88Q99836 296 aa18.74■□□□□ 0.59
SNED1-208ENST00000466618 ISCA1Q9BUE6 129 aa18.74■□□□□ 0.59
SNED1-208ENST00000466618 DDX49Q9Y6V7 483 aaKnown RBP18.74■□□□□ 0.59
SNED1-208ENST00000466618 TUBGCP6Q96RT7 1819 aa18.74■□□□□ 0.59
SNED1-208ENST00000466618 GYS1P13807 737 aa18.74■□□□□ 0.59
SNED1-208ENST00000466618 ARFGEF2Q9Y6D5 1785 aa18.73■□□□□ 0.59
SNED1-208ENST00000466618 SCN7AQ01118 1682 aa18.73■□□□□ 0.59
SNED1-208ENST00000466618 BCORQ6W2J9 1755 aa18.73■□□□□ 0.59
SNED1-208ENST00000466618 A0A0U1RQG5 324 aaPredicted RBP18.73■□□□□ 0.59
SNED1-208ENST00000466618 DYNC1I1O14576 645 aa18.73■□□□□ 0.59
SNED1-208ENST00000466618 BAG4O95429 457 aaKnown RBP18.73■□□□□ 0.59
SNED1-208ENST00000466618 HSP90AB3PQ58FF7 597 aa18.73■□□□□ 0.59
SNED1-208ENST00000466618 MTERF4Q7Z6M4 381 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms