RNA–Protein interactions for RNA: ENST00000466613.2

SDHB-203, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-203ENST00000466613 DBF4Q9UBU7 674 aaPredicted RBP21.63■■□□□ 1.05
SDHB-203ENST00000466613 TOMM70O94826 608 aa21.62■■□□□ 1.05
SDHB-203ENST00000466613 CCDC93Q567U6 631 aa21.62■■□□□ 1.05
SDHB-203ENST00000466613 LAMB2P55268 1798 aa21.61■■□□□ 1.05
SDHB-203ENST00000466613 GLTPD2A6NH11 291 aa21.6■■□□□ 1.05
SDHB-203ENST00000466613 UTP14AQ9BVJ6 771 aaKnown RBP21.6■■□□□ 1.05
SDHB-203ENST00000466613 RNF123Q5XPI4 1314 aa21.59■■□□□ 1.05
SDHB-203ENST00000466613 TCIRG1Q13488 830 aa21.59■■□□□ 1.05
SDHB-203ENST00000466613 CCDC27Q2M243 656 aa21.59■■□□□ 1.05
SDHB-203ENST00000466613 RPGRQ92834 1020 aaKnown RBP21.59■■□□□ 1.05
SDHB-203ENST00000466613 RRAGCQ9HB90 399 aa21.59■■□□□ 1.05
SDHB-203ENST00000466613 WDR90Q96KV7 1748 aa21.58■■□□□ 1.05
SDHB-203ENST00000466613 HSPA6P17066 643 aa21.58■■□□□ 1.05
SDHB-203ENST00000466613 HOXA10P31260 410 aaPredicted RBP21.58■■□□□ 1.05
SDHB-203ENST00000466613 NLRP10Q86W26 655 aa21.58■■□□□ 1.05
SDHB-203ENST00000466613 HYPKQ9NX55 129 aa21.58■■□□□ 1.05
SDHB-203ENST00000466613 CEP350Q5VT06 3117 aa21.58■■□□□ 1.05
SDHB-203ENST00000466613 SLC10A5Q5PT55 438 aa21.57■■□□□ 1.04
SDHB-203ENST00000466613 OLFM4Q6UX06 510 aa21.57■■□□□ 1.04
SDHB-203ENST00000466613 ANKRD13DQ6ZTN6 518 aa21.57■■□□□ 1.04
SDHB-203ENST00000466613 C16orf71Q8IYS4 520 aaPredicted RBP21.57■■□□□ 1.04
SDHB-203ENST00000466613 PLBD2Q8NHP8 589 aa21.57■■□□□ 1.04
SDHB-203ENST00000466613 FKBP4Q02790 459 aaKnown RBP eCLIP21.56■■□□□ 1.04
SDHB-203ENST00000466613 C3orf67Q6ZVT6 689 aa21.56■■□□□ 1.04
SDHB-203ENST00000466613 RTKN2Q8IZC4 609 aa21.56■■□□□ 1.04
SDHB-203ENST00000466613 RBM46Q8TBY0 533 aaKnown RBP21.56■■□□□ 1.04
SDHB-203ENST00000466613 RBM17Q96I25 401 aaKnown RBP21.56■■□□□ 1.04
SDHB-203ENST00000466613 NLRP3Q96P20 1036 aa21.56■■□□□ 1.04
SDHB-203ENST00000466613 SNED1Q8TER0 1413 aa21.55■■□□□ 1.04
SDHB-203ENST00000466613 ELL2O00472 640 aaPredicted RBP21.55■■□□□ 1.04
SDHB-203ENST00000466613 NCBP3Q53F19 620 aaKnown RBP21.55■■□□□ 1.04
SDHB-203ENST00000466613 WWC1Q8IX03 1113 aa21.55■■□□□ 1.04
SDHB-203ENST00000466613 C8orf58Q8NAV2 365 aa21.55■■□□□ 1.04
SDHB-203ENST00000466613 CRAMP1Q96RY5 1269 aa21.55■■□□□ 1.04
SDHB-203ENST00000466613 DDX60Q8IY21 1712 aaKnown RBP21.55■■□□□ 1.04
SDHB-203ENST00000466613 DPY19L2Q6NUT2 758 aa21.54■■□□□ 1.04
SDHB-203ENST00000466613 TRMT112Q9UI30 125 aaKnown RBP21.54■■□□□ 1.04
SDHB-203ENST00000466613 CC2D2BQ6DHV5 1058 aa21.53■■□□□ 1.04
SDHB-203ENST00000466613 ISCA1Q9BUE6 129 aa21.53■■□□□ 1.04
SDHB-203ENST00000466613 SH3TC1Q8TE82 1336 aa21.53■■□□□ 1.04
SDHB-203ENST00000466613 VEGFAP15692 232 aaPredicted RBP21.52■■□□□ 1.04
SDHB-203ENST00000466613 TSR2Q969E8 191 aaKnown RBP21.52■■□□□ 1.04
SDHB-203ENST00000466613 CHMP4AQ9BY43 222 aa21.52■■□□□ 1.04
SDHB-203ENST00000466613 ZNF277Q9NRM2 450 aaPredicted RBP21.52■■□□□ 1.04
SDHB-203ENST00000466613 PPEF1O14829 653 aaPredicted RBP21.51■■□□□ 1.03
SDHB-203ENST00000466613 PSMD1Q99460 953 aa21.51■■□□□ 1.03
SDHB-203ENST00000466613 PHAXQ9H814 394 aaKnown RBP21.51■■□□□ 1.03
SDHB-203ENST00000466613 HCLS1P14317 486 aaPredicted RBP21.5■■□□□ 1.03
SDHB-203ENST00000466613 GOLGA2Q08379 1002 aa21.5■■□□□ 1.03
SDHB-203ENST00000466613 GRIPAP1Q4V328 841 aa21.5■■□□□ 1.03
SDHB-203ENST00000466613 CCDC30Q5VVM6 783 aa21.5■■□□□ 1.03
SDHB-203ENST00000466613 SYNE4Q8N205 404 aa21.5■■□□□ 1.03
SDHB-203ENST00000466613 TSPYL6Q8N831 410 aa21.5■■□□□ 1.03
SDHB-203ENST00000466613 ABCC4O15439 1325 aa21.5■■□□□ 1.03
SDHB-203ENST00000466613 IL16Q14005 1332 aa21.5■■□□□ 1.03
SDHB-203ENST00000466613 ATP5J2-PTCD1G3V325 749 aa21.49■■□□□ 1.03
SDHB-203ENST00000466613 IARSP41252 1262 aaKnown RBP21.49■■□□□ 1.03
SDHB-203ENST00000466613 FSTL1Q12841 308 aa21.49■■□□□ 1.03
SDHB-203ENST00000466613 RIC3Q7Z5B4 369 aa21.49■■□□□ 1.03
SDHB-203ENST00000466613 TAF1P21675 1872 aa21.49■■□□□ 1.03
SDHB-203ENST00000466613 SCN4AP35499 1836 aa21.48■■□□□ 1.03
SDHB-203ENST00000466613 POTECB2RU33 542 aa21.48■■□□□ 1.03
SDHB-203ENST00000466613 ZNF428Q96B54 188 aa21.48■■□□□ 1.03
SDHB-203ENST00000466613 DDNO94850 711 aaPredicted RBP21.47■■□□□ 1.03
SDHB-203ENST00000466613 TRIM28Q13263 835 aaKnown RBP21.47■■□□□ 1.03
SDHB-203ENST00000466613 TCERG1O14776 1098 aaKnown RBP21.46■■□□□ 1.03
SDHB-203ENST00000466613 APLP1P51693 650 aa21.46■■□□□ 1.03
SDHB-203ENST00000466613 SLC51AQ86UW1 340 aa21.46■■□□□ 1.03
SDHB-203ENST00000466613 SMC1BQ8NDV3 1235 aa21.46■■□□□ 1.03
SDHB-203ENST00000466613 ATP6V0A2Q9Y487 856 aa21.46■■□□□ 1.03
SDHB-203ENST00000466613 CACNA1FO60840 1977 aa21.45■■□□□ 1.02
SDHB-203ENST00000466613 DDX46Q7L014 1031 aaKnown RBP21.45■■□□□ 1.02
SDHB-203ENST00000466613 FAM89AQ96GI7 184 aa21.45■■□□□ 1.02
SDHB-203ENST00000466613 TMX4Q9H1E5 349 aaPredicted RBP21.45■■□□□ 1.02
SDHB-203ENST00000466613 COL4A5P29400 1685 aa21.44■■□□□ 1.02
SDHB-203ENST00000466613 LRRC37AA6NMS7 1700 aa21.44■■□□□ 1.02
SDHB-203ENST00000466613 BBOX1O75936 387 aa21.44■■□□□ 1.02
SDHB-203ENST00000466613 DDX58O95786 925 aaKnown RBP21.44■■□□□ 1.02
SDHB-203ENST00000466613 TWISTNBQ3B726 338 aaPredicted RBP21.44■■□□□ 1.02
SDHB-203ENST00000466613 WDR63Q8IWG1 891 aa21.44■■□□□ 1.02
SDHB-203ENST00000466613 FAM9BQ8IZU0 186 aa21.44■■□□□ 1.02
SDHB-203ENST00000466613 SALL2Q9Y467 1007 aaPredicted RBP21.44■■□□□ 1.02
SDHB-203ENST00000466613 ZNF541Q9H0D2 1346 aa21.44■■□□□ 1.02
SDHB-203ENST00000466613 FANCIQ9NVI1 1328 aa21.44■■□□□ 1.02
SDHB-203ENST00000466613 FZD9O00144 591 aa21.43■■□□□ 1.02
SDHB-203ENST00000466613 GRAPQ13588 217 aa21.43■■□□□ 1.02
SDHB-203ENST00000466613 GRAPLQ8TC17 118 aaPredicted RBP21.43■■□□□ 1.02
SDHB-203ENST00000466613 JDP2Q8WYK2 163 aa21.43■■□□□ 1.02
SDHB-203ENST00000466613 L3MBTL3Q96JM7 780 aaPredicted RBP21.43■■□□□ 1.02
SDHB-203ENST00000466613 MYD88Q99836 296 aa21.43■■□□□ 1.02
SDHB-203ENST00000466613 STK31Q9BXU1 1019 aa21.43■■□□□ 1.02
SDHB-203ENST00000466613 SP8Q8IXZ3 490 aa21.42■■□□□ 1.02
SDHB-203ENST00000466613 IQCA1LA6NCM1 817 aa21.41■■□□□ 1.02
SDHB-203ENST00000466613 SF3B3Q15393 1217 aaKnown RBP21.41■■□□□ 1.02
SDHB-203ENST00000466613 RTL5Q5HYW3 569 aaPredicted RBP21.41■■□□□ 1.02
SDHB-203ENST00000466613 ZBTB38Q8NAP3 1195 aaPredicted RBP21.41■■□□□ 1.02
SDHB-203ENST00000466613 METTL22Q9BUU2 404 aaPredicted RBP21.41■■□□□ 1.02
SDHB-203ENST00000466613 IRS4O14654 1257 aaPredicted RBP21.4■■□□□ 1.02
SDHB-203ENST00000466613 LARGE2Q8N3Y3 721 aa21.4■■□□□ 1.02
SDHB-203ENST00000466613 CCDC191Q8NCU4 936 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms