RNA–Protein interactions for RNA: ENST00000466396.5

CLTA-206, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-206ENST00000466396 PI4KAP2A4QPH2 592 aa29.4■■■□□ 2.3
CLTA-206ENST00000466396 GTF2E1P29083 439 aaPredicted RBP29.4■■■□□ 2.3
CLTA-206ENST00000466396 FLIIQ13045 1269 aa29.4■■■□□ 2.3
CLTA-206ENST00000466396 KSR2Q6VAB6 950 aa29.4■■■□□ 2.3
CLTA-206ENST00000466396 SYNE4Q8N205 404 aa29.4■■■□□ 2.3
CLTA-206ENST00000466396 PI4KAP1Q8N8J0 262 aa29.4■■■□□ 2.3
CLTA-206ENST00000466396 MAP3K2Q9Y2U5 619 aa29.4■■■□□ 2.3
CLTA-206ENST00000466396 ARFGEF1Q9Y6D6 1849 aa29.39■■■□□ 2.3
CLTA-206ENST00000466396 GRIN3BO60391 1043 aa29.39■■■□□ 2.3
CLTA-206ENST00000466396 DDX58O95786 925 aaKnown RBP29.39■■■□□ 2.3
CLTA-206ENST00000466396 SRGNP10124 158 aa29.39■■■□□ 2.3
CLTA-206ENST00000466396 TRIM28Q13263 835 aaKnown RBP29.39■■■□□ 2.3
CLTA-206ENST00000466396 METTL22Q9BUU2 404 aaPredicted RBP29.39■■■□□ 2.3
CLTA-206ENST00000466396 PDZRN3Q9UPQ7 1066 aa29.39■■■□□ 2.3
CLTA-206ENST00000466396 DALRD3Q5D0E6 543 aaKnown RBP29.38■■■□□ 2.29
CLTA-206ENST00000466396 MYD88Q99836 296 aa29.38■■■□□ 2.29
CLTA-206ENST00000466396 RIC1Q4ADV7 1423 aa29.37■■■□□ 2.29
CLTA-206ENST00000466396 SLC10A5Q5PT55 438 aa29.36■■■□□ 2.29
CLTA-206ENST00000466396 C3orf67Q6ZVT6 689 aa29.36■■■□□ 2.29
CLTA-206ENST00000466396 TTLL6Q8N841 843 aa29.35■■■□□ 2.29
CLTA-206ENST00000466396 ZNF622Q969S3 477 aaKnown RBP eCLIP29.35■■■□□ 2.293e-9■□□□□ 8.1
CLTA-206ENST00000466396 TRMT112Q9UI30 125 aaKnown RBP29.35■■■□□ 2.29
CLTA-206ENST00000466396 CRY2Q49AN0 593 aa29.34■■■□□ 2.29
CLTA-206ENST00000466396 STYK1Q6J9G0 422 aa29.34■■■□□ 2.29
CLTA-206ENST00000466396 RNF123Q5XPI4 1314 aa29.34■■■□□ 2.29
CLTA-206ENST00000466396 CHD4Q14839 1912 aa29.33■■■□□ 2.29
CLTA-206ENST00000466396 IGKV5-2P06315 115 aa29.33■■■□□ 2.29
CLTA-206ENST00000466396 FKBP5Q13451 457 aaPredicted RBP29.33■■■□□ 2.29
CLTA-206ENST00000466396 MRPL50Q8N5N7 158 aaKnown RBP29.33■■■□□ 2.29
CLTA-206ENST00000466396 MASTLQ96GX5 879 aa29.33■■■□□ 2.29
CLTA-206ENST00000466396 SLX4Q8IY92 1834 aa29.32■■■□□ 2.28
CLTA-206ENST00000466396 SSH1Q8WYL5 1049 aa29.32■■■□□ 2.28
CLTA-206ENST00000466396 CACNA1SQ13698 1873 aa29.31■■■□□ 2.28
CLTA-206ENST00000466396 DDX60Q8IY21 1712 aaKnown RBP29.31■■■□□ 2.28
CLTA-206ENST00000466396 SH3TC1Q8TE82 1336 aa29.31■■■□□ 2.28
CLTA-206ENST00000466396 HCLS1P14317 486 aaPredicted RBP29.31■■■□□ 2.28
CLTA-206ENST00000466396 NPR1P16066 1061 aa29.31■■■□□ 2.28
CLTA-206ENST00000466396 FAM89AQ96GI7 184 aa29.31■■■□□ 2.28
CLTA-206ENST00000466396 LAMB2P55268 1798 aa29.31■■■□□ 2.28
CLTA-206ENST00000466396 ZBED9Q6R2W3 1325 aa29.3■■■□□ 2.28
CLTA-206ENST00000466396 CCDC191Q8NCU4 936 aa29.3■■■□□ 2.28
CLTA-206ENST00000466396 DNAAF4Q8WXU2 420 aa29.29■■■□□ 2.28
CLTA-206ENST00000466396 F6X3S4 739 aa29.28■■■□□ 2.28
CLTA-206ENST00000466396 CWF19L2Q2TBE0 894 aaKnown RBP29.28■■■□□ 2.28
CLTA-206ENST00000466396 RTL5Q5HYW3 569 aaPredicted RBP29.28■■■□□ 2.28
CLTA-206ENST00000466396 CNKSR1Q969H4 720 aa29.28■■■□□ 2.28
CLTA-206ENST00000466396 CT47B1P0C2W7 299 aaPredicted RBP29.27■■■□□ 2.28
CLTA-206ENST00000466396 PRPF40BQ6NWY9 871 aaKnown RBP29.27■■■□□ 2.28
CLTA-206ENST00000466396 BCL2L13Q9BXK5 485 aa29.27■■■□□ 2.28
CLTA-206ENST00000466396 CWC25Q9NXE8 425 aaPredicted RBP29.27■■■□□ 2.28
CLTA-206ENST00000466396 NEURL1BA8MQ27 555 aa29.26■■■□□ 2.27
CLTA-206ENST00000466396 HOXA10P31260 410 aaPredicted RBP29.26■■■□□ 2.27
CLTA-206ENST00000466396 ARHGAP27Q6ZUM4 889 aa29.26■■■□□ 2.27
CLTA-206ENST00000466396 ZBTB38Q8NAP3 1195 aaPredicted RBP29.26■■■□□ 2.27
CLTA-206ENST00000466396 JARID2Q92833 1246 aaPredicted RBP29.26■■■□□ 2.27
CLTA-206ENST00000466396 NLRP3Q96P20 1036 aa29.26■■■□□ 2.27
CLTA-206ENST00000466396 ALDH1L2Q3SY69 923 aa29.25■■■□□ 2.27
CLTA-206ENST00000466396 PCCAP05165 728 aaPredicted RBP29.24■■■□□ 2.27
CLTA-206ENST00000466396 NEXNQ0ZGT2 675 aa29.24■■■□□ 2.27
CLTA-206ENST00000466396 C7orf43Q8WVR3 580 aa29.24■■■□□ 2.27
CLTA-206ENST00000466396 C21orf2O43822 256 aa29.23■■■□□ 2.27
CLTA-206ENST00000466396 ZNF219Q9P2Y4 722 aaPredicted RBP29.23■■■□□ 2.27
CLTA-206ENST00000466396 IRS4O14654 1257 aaPredicted RBP29.22■■■□□ 2.27
CLTA-206ENST00000466396 LINS1Q8NG48 757 aa29.22■■■□□ 2.27
CLTA-206ENST00000466396 RPGRQ92834 1020 aaKnown RBP29.22■■■□□ 2.27
CLTA-206ENST00000466396 YY1P25490 414 aa29.21■■■□□ 2.27
CLTA-206ENST00000466396 BEND3Q5T5X7 828 aa29.21■■■□□ 2.27
CLTA-206ENST00000466396 ALDH1B1P30837 517 aa29.2■■■□□ 2.26
CLTA-206ENST00000466396 RARSP54136 660 aaKnown RBP29.2■■■□□ 2.26
CLTA-206ENST00000466396 GCKRQ14397 625 aa29.2■■■□□ 2.26
CLTA-206ENST00000466396 CRAMP1Q96RY5 1269 aa29.2■■■□□ 2.26
CLTA-206ENST00000466396 SMC4Q9NTJ3 1288 aa29.2■■■□□ 2.26
CLTA-206ENST00000466396 OLFM4Q6UX06 510 aa29.19■■■□□ 2.26
CLTA-206ENST00000466396 RBM17Q96I25 401 aaKnown RBP29.19■■■□□ 2.26
CLTA-206ENST00000466396 TAF1P21675 1872 aa29.19■■■□□ 2.26
CLTA-206ENST00000466396 FER1L6Q2WGJ9 1857 aa29.19■■■□□ 2.26
CLTA-206ENST00000466396 H7C1W4 665 aa29.18■■■□□ 2.26
CLTA-206ENST00000466396 SF3B3Q15393 1217 aaKnown RBP29.18■■■□□ 2.26
CLTA-206ENST00000466396 SLC51AQ86UW1 340 aa29.18■■■□□ 2.26
CLTA-206ENST00000466396 SBF1O95248 1867 aa29.18■■■□□ 2.26
CLTA-206ENST00000466396 CDHR2Q9BYE9 1310 aa29.18■■■□□ 2.26
CLTA-206ENST00000466396 NFKBIEO00221 500 aa29.17■■■□□ 2.26
CLTA-206ENST00000466396 PRELPP51888 382 aa29.17■■■□□ 2.26
CLTA-206ENST00000466396 BRPF1P55201 1214 aaPredicted RBP29.17■■■□□ 2.26
CLTA-206ENST00000466396 RASSF7Q02833 373 aa29.17■■■□□ 2.26
CLTA-206ENST00000466396 PTPRCP08575 1304 aa29.17■■■□□ 2.26
CLTA-206ENST00000466396 COL4A1P02462 1669 aa29.16■■■□□ 2.26
CLTA-206ENST00000466396 CASP7P55210 303 aa29.16■■■□□ 2.26
CLTA-206ENST00000466396 ABCC4O15439 1325 aa29.16■■■□□ 2.26
CLTA-206ENST00000466396 SLC4A10Q6U841 1118 aa29.14■■■□□ 2.26
CLTA-206ENST00000466396 UBE3BQ7Z3V4 1068 aa29.14■■■□□ 2.26
CLTA-206ENST00000466396 SNED1Q8TER0 1413 aa29.13■■■□□ 2.25
CLTA-206ENST00000466396 PDE8AO60658 829 aa29.13■■■□□ 2.25
CLTA-206ENST00000466396 NOB1Q9ULX3 412 aaKnown RBP29.13■■■□□ 2.25
CLTA-206ENST00000466396 DDX46Q7L014 1031 aaKnown RBP29.11■■■□□ 2.25
CLTA-206ENST00000466396 CCDC88AQ3V6T2 1871 aa29.1■■■□□ 2.25
CLTA-206ENST00000466396 PPEF1O14829 653 aaPredicted RBP29.1■■■□□ 2.25
CLTA-206ENST00000466396 ALDH1L1O75891 902 aa29.1■■■□□ 2.25
CLTA-206ENST00000466396 CCDC93Q567U6 631 aa29.1■■■□□ 2.25
CLTA-206ENST00000466396 SOGA3Q5TF21 947 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms