RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 ABCC12Q96J65 1359 aa8.24□□□□□ -1.09
CDHR3-204ENST00000466351 SPDYE2BA6NHP3 402 aa8.24□□□□□ -1.09
CDHR3-204ENST00000466351 NEURL1BA8MQ27 555 aa8.24□□□□□ -1.09
CDHR3-204ENST00000466351 ESPNB1AK53 854 aa8.24□□□□□ -1.09
CDHR3-204ENST00000466351 SPDYE6P0CI01 402 aa8.24□□□□□ -1.09
CDHR3-204ENST00000466351 NCLP19338 710 aaKnown RBP8.24□□□□□ -1.09
CDHR3-204ENST00000466351 PDCP20941 246 aa8.24□□□□□ -1.09
CDHR3-204ENST00000466351 TERF1P54274 439 aa8.24□□□□□ -1.09
CDHR3-204ENST00000466351 OS9Q13438 667 aaPredicted RBP8.24□□□□□ -1.09
CDHR3-204ENST00000466351 KRT32Q14532 448 aa8.24□□□□□ -1.09
CDHR3-204ENST00000466351 SPDYE2Q495Y8 402 aa8.24□□□□□ -1.09
CDHR3-204ENST00000466351 MCTP1Q6DN14 999 aa8.24□□□□□ -1.09
CDHR3-204ENST00000466351 LRSAM1Q6UWE0 723 aa8.24□□□□□ -1.09
CDHR3-204ENST00000466351 MPRIPQ6WCQ1 1025 aa8.24□□□□□ -1.09
CDHR3-204ENST00000466351 LRP10Q7Z4F1 713 aa8.24□□□□□ -1.09
CDHR3-204ENST00000466351 UNC5CLQ8IV45 518 aa8.24□□□□□ -1.09
CDHR3-204ENST00000466351 ZGPATQ8N5A5 531 aaKnown RBP8.24□□□□□ -1.09
CDHR3-204ENST00000466351 FMNL2Q96PY5 1086 aa8.24□□□□□ -1.09
CDHR3-204ENST00000466351 GZF1Q9H116 711 aaPredicted RBP8.24□□□□□ -1.09
CDHR3-204ENST00000466351 ZSWIM6Q9HCJ5 1215 aa8.24□□□□□ -1.09
CDHR3-204ENST00000466351 GPR108Q9NPR9 543 aa8.24□□□□□ -1.09
CDHR3-204ENST00000466351 ATG3Q9NT62 314 aa8.24□□□□□ -1.09
CDHR3-204ENST00000466351 PALD1Q9ULE6 856 aa8.24□□□□□ -1.09
CDHR3-204ENST00000466351 SNX14Q9Y5W7 946 aa8.24□□□□□ -1.09
CDHR3-204ENST00000466351 PCDH11XQ9BZA7 1347 aa8.24□□□□□ -1.09
CDHR3-204ENST00000466351 PCDH11YQ9BZA8 1340 aa8.24□□□□□ -1.09
CDHR3-204ENST00000466351 LAMA4Q16363 1823 aa8.24□□□□□ -1.09
CDHR3-204ENST00000466351 PALLDQ8WX93 1383 aa8.23□□□□□ -1.09
CDHR3-204ENST00000466351 G3BP1Q13283 466 aaKnown RBP eCLIP8.23□□□□□ -1.09
CDHR3-204ENST00000466351 GCKRQ14397 625 aa8.23□□□□□ -1.09
CDHR3-204ENST00000466351 UVSSAQ2YD98 709 aa8.23□□□□□ -1.09
CDHR3-204ENST00000466351 GAS2L3Q86XJ1 694 aa8.23□□□□□ -1.09
CDHR3-204ENST00000466351 REM2Q8IYK8 340 aaPredicted RBP8.23□□□□□ -1.09
CDHR3-204ENST00000466351 RGS22Q8NE09 1264 aa8.23□□□□□ -1.09
CDHR3-204ENST00000466351 NECTIN2Q92692 538 aa8.23□□□□□ -1.09
CDHR3-204ENST00000466351 MAP4K1Q92918 833 aa8.23□□□□□ -1.09
CDHR3-204ENST00000466351 PANK2Q9BZ23 570 aa8.23□□□□□ -1.09
CDHR3-204ENST00000466351 IL1RAPL2Q9NP60 686 aa8.23□□□□□ -1.09
CDHR3-204ENST00000466351 ARAP2Q8WZ64 1704 aa8.23□□□□□ -1.09
CDHR3-204ENST00000466351 COL5A2P05997 1499 aaPredicted RBP8.22□□□□□ -1.09
CDHR3-204ENST00000466351 ERVV-2B6SEH9 535 aa8.22□□□□□ -1.09
CDHR3-204ENST00000466351 KCNQ3O43525 872 aa8.22□□□□□ -1.09
CDHR3-204ENST00000466351 ATP5JP18859 108 aa8.22□□□□□ -1.09
CDHR3-204ENST00000466351 NECTIN1Q15223 517 aa8.22□□□□□ -1.09
CDHR3-204ENST00000466351 NKX1-1Q15270 411 aaPredicted RBP8.22□□□□□ -1.09
CDHR3-204ENST00000466351 USPL1Q5W0Q7 1092 aa8.22□□□□□ -1.09
CDHR3-204ENST00000466351 ZSCAN30Q86W11 494 aa8.22□□□□□ -1.09
CDHR3-204ENST00000466351 NUTM1Q86Y26 1132 aa8.22□□□□□ -1.09
CDHR3-204ENST00000466351 TTC5Q8N0Z6 440 aa8.22□□□□□ -1.09
CDHR3-204ENST00000466351 PLBD2Q8NHP8 589 aa8.22□□□□□ -1.09
CDHR3-204ENST00000466351 BICC1Q9H694 974 aaKnown RBP8.22□□□□□ -1.09
CDHR3-204ENST00000466351 AXIN2Q9Y2T1 843 aa8.22□□□□□ -1.09
CDHR3-204ENST00000466351 CYP46A1Q9Y6A2 500 aa8.22□□□□□ -1.09
CDHR3-204ENST00000466351 ELP1O95163 1332 aa8.22□□□□□ -1.09
CDHR3-204ENST00000466351 WDR17Q8IZU2 1322 aa8.22□□□□□ -1.09
CDHR3-204ENST00000466351 TOGARAM1Q9Y4F4 1720 aa8.21□□□□□ -1.09
CDHR3-204ENST00000466351 STRCQ7RTU9 1775 aa8.21□□□□□ -1.1
CDHR3-204ENST00000466351 IGKV5-2P06315 115 aa8.21□□□□□ -1.1
CDHR3-204ENST00000466351 ZSCAN22P10073 491 aaPredicted RBP8.21□□□□□ -1.1
CDHR3-204ENST00000466351 UBE2HP62256 183 aa8.21□□□□□ -1.1
CDHR3-204ENST00000466351 PKP1Q13835 747 aa8.21□□□□□ -1.1
CDHR3-204ENST00000466351 PROSER3Q2NL68 480 aa8.21□□□□□ -1.1
CDHR3-204ENST00000466351 CAVIN1Q6NZI2 390 aaKnown RBP8.21□□□□□ -1.1
CDHR3-204ENST00000466351 ANKRD13DQ6ZTN6 518 aa8.21□□□□□ -1.1
CDHR3-204ENST00000466351 RUFY3Q7L099 469 aa8.21□□□□□ -1.1
CDHR3-204ENST00000466351 RIC3Q7Z5B4 369 aa8.21□□□□□ -1.1
CDHR3-204ENST00000466351 AACSQ86V21 672 aa8.21□□□□□ -1.1
CDHR3-204ENST00000466351 GPT2Q8TD30 523 aa8.21□□□□□ -1.1
CDHR3-204ENST00000466351 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.21□□□□□ -1.1
CDHR3-204ENST00000466351 KAZALD1Q96I82 304 aa8.21□□□□□ -1.1
CDHR3-204ENST00000466351 SUCLG2Q96I99 432 aa8.21□□□□□ -1.1
CDHR3-204ENST00000466351 ITGB4P16144 1822 aa8.21□□□□□ -1.1
CDHR3-204ENST00000466351 SH3TC1Q8TE82 1336 aa8.21□□□□□ -1.1
CDHR3-204ENST00000466351 COL22A1Q8NFW1 1626 aaPredicted RBP8.21□□□□□ -1.1
CDHR3-204ENST00000466351 COL14A1Q05707 1796 aaKnown RBP8.2□□□□□ -1.1
CDHR3-204ENST00000466351 STX6O43752 255 aa8.2□□□□□ -1.1
CDHR3-204ENST00000466351 CIAO1O76071 339 aa8.2□□□□□ -1.1
CDHR3-204ENST00000466351 SASH1O94885 1247 aa8.2□□□□□ -1.1
CDHR3-204ENST00000466351 HMGB1P09429 215 aaKnown RBP8.2□□□□□ -1.1
CDHR3-204ENST00000466351 AK2P54819 239 aa8.2□□□□□ -1.1
CDHR3-204ENST00000466351 LRRFIP1Q32MZ4 808 aaKnown RBP8.2□□□□□ -1.1
CDHR3-204ENST00000466351 TSHZ3Q63HK5 1081 aa8.2□□□□□ -1.1
CDHR3-204ENST00000466351 SMC3Q9UQE7 1217 aa8.2□□□□□ -1.1
CDHR3-204ENST00000466351 LRP5O75197 1615 aa8.2□□□□□ -1.1
CDHR3-204ENST00000466351 SOS2Q07890 1332 aaPredicted RBP8.2□□□□□ -1.1
CDHR3-204ENST00000466351 LAMB2P55268 1798 aa8.2□□□□□ -1.1
CDHR3-204ENST00000466351 ZNF609O15014 1411 aa8.2□□□□□ -1.1
CDHR3-204ENST00000466351 ZNF831Q5JPB2 1677 aa8.19□□□□□ -1.1
CDHR3-204ENST00000466351 ZNF500O60304 480 aaPredicted RBP8.19□□□□□ -1.1
CDHR3-204ENST00000466351 PRPF40AO75400 957 aaKnown RBP8.19□□□□□ -1.1
CDHR3-204ENST00000466351 F13A1P00488 732 aa8.19□□□□□ -1.1
CDHR3-204ENST00000466351 CASTP20810 708 aaKnown RBP8.19□□□□□ -1.1
CDHR3-204ENST00000466351 RFX5P48382 616 aaPredicted RBP8.19□□□□□ -1.1
CDHR3-204ENST00000466351 CWF19L2Q2TBE0 894 aaKnown RBP8.19□□□□□ -1.1
CDHR3-204ENST00000466351 CCDC183Q5T5S1 534 aa8.19□□□□□ -1.1
CDHR3-204ENST00000466351 CWC27Q6UX04 472 aaKnown RBP8.19□□□□□ -1.1
CDHR3-204ENST00000466351 FBXL16Q8N461 479 aa8.19□□□□□ -1.1
CDHR3-204ENST00000466351 XAGE3Q8WTP9 111 aa8.19□□□□□ -1.1
CDHR3-204ENST00000466351 EAF2Q96CJ1 260 aaPredicted RBP8.19□□□□□ -1.1
CDHR3-204ENST00000466351 ZNF496Q96IT1 587 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms