RNA–Protein interactions for RNA: ENST00000466252.5

SNX21-208, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-208ENST00000466252 C2CD5Q86YS7 1000 aa29.46■■■□□ 2.31
SNX21-208ENST00000466252 MYD88Q99836 296 aa29.46■■■□□ 2.31
SNX21-208ENST00000466252 BRCA1P38398 1863 aaKnown RBP29.46■■■□□ 2.31
SNX21-208ENST00000466252 H0YIN7 160 aa29.45■■■□□ 2.31
SNX21-208ENST00000466252 ALDH1L2Q3SY69 923 aa29.45■■■□□ 2.31
SNX21-208ENST00000466252 SYNE4Q8N205 404 aa29.45■■■□□ 2.31
SNX21-208ENST00000466252 PIM2Q9P1W9 311 aa29.45■■■□□ 2.31
SNX21-208ENST00000466252 FKBP5Q13451 457 aaPredicted RBP29.44■■■□□ 2.3
SNX21-208ENST00000466252 GPR162Q16538 588 aa29.44■■■□□ 2.3
SNX21-208ENST00000466252 IGKV5-2P06315 115 aa29.43■■■□□ 2.3
SNX21-208ENST00000466252 SRGNP10124 158 aa29.43■■■□□ 2.3
SNX21-208ENST00000466252 CCDC191Q8NCU4 936 aa29.43■■■□□ 2.3
SNX21-208ENST00000466252 ABCC12Q96J65 1359 aa29.42■■■□□ 2.3
SNX21-208ENST00000466252 DCAF8L1A6NGE4 600 aa29.42■■■□□ 2.3
SNX21-208ENST00000466252 TRMT112Q9UI30 125 aaKnown RBP29.42■■■□□ 2.3
SNX21-208ENST00000466252 WWC3Q9ULE0 1092 aa29.42■■■□□ 2.3
SNX21-208ENST00000466252 RNF123Q5XPI4 1314 aa29.42■■■□□ 2.3
SNX21-208ENST00000466252 DNAAF4Q8WXU2 420 aa29.41■■■□□ 2.3
SNX21-208ENST00000466252 BRPF1P55201 1214 aaPredicted RBP29.4■■■□□ 2.3
SNX21-208ENST00000466252 RIC1Q4ADV7 1423 aa29.39■■■□□ 2.3
SNX21-208ENST00000466252 RARSP54136 660 aaKnown RBP29.39■■■□□ 2.3
SNX21-208ENST00000466252 CRY2Q49AN0 593 aa29.39■■■□□ 2.3
SNX21-208ENST00000466252 PELP1Q8IZL8 1130 aaKnown RBP29.39■■■□□ 2.3
SNX21-208ENST00000466252 FAM89AQ96GI7 184 aa29.39■■■□□ 2.3
SNX21-208ENST00000466252 DLEC1Q9Y238 1755 aa29.39■■■□□ 2.29
SNX21-208ENST00000466252 F6X3S4 739 aa29.38■■■□□ 2.29
SNX21-208ENST00000466252 BCL2L13Q9BXK5 485 aa29.38■■■□□ 2.29
SNX21-208ENST00000466252 BCS1LQ9Y276 419 aa29.38■■■□□ 2.29
SNX21-208ENST00000466252 SH3TC1Q8TE82 1336 aa29.38■■■□□ 2.29
SNX21-208ENST00000466252 DALRD3Q5D0E6 543 aaKnown RBP29.37■■■□□ 2.29
SNX21-208ENST00000466252 STYK1Q6J9G0 422 aa29.37■■■□□ 2.29
SNX21-208ENST00000466252 C3orf67Q6ZVT6 689 aa29.37■■■□□ 2.29
SNX21-208ENST00000466252 MASTLQ96GX5 879 aa29.37■■■□□ 2.29
SNX21-208ENST00000466252 CWC25Q9NXE8 425 aaPredicted RBP29.37■■■□□ 2.29
SNX21-208ENST00000466252 NEURL1BA8MQ27 555 aa29.36■■■□□ 2.29
SNX21-208ENST00000466252 GRIN3BO60391 1043 aa29.36■■■□□ 2.29
SNX21-208ENST00000466252 NEXNQ0ZGT2 675 aa29.36■■■□□ 2.29
SNX21-208ENST00000466252 CWF19L2Q2TBE0 894 aaKnown RBP29.36■■■□□ 2.29
SNX21-208ENST00000466252 TTLL6Q8N841 843 aa29.36■■■□□ 2.29
SNX21-208ENST00000466252 ZBTB38Q8NAP3 1195 aaPredicted RBP29.36■■■□□ 2.29
SNX21-208ENST00000466252 ZNF622Q969S3 477 aaKnown RBP eCLIP29.36■■■□□ 2.29
SNX21-208ENST00000466252 COL11A2P13942 1736 aaPredicted RBP29.35■■■□□ 2.29
SNX21-208ENST00000466252 HCLS1P14317 486 aaPredicted RBP29.35■■■□□ 2.29
SNX21-208ENST00000466252 NPR1P16066 1061 aa29.35■■■□□ 2.29
SNX21-208ENST00000466252 BEND3Q5T5X7 828 aa29.35■■■□□ 2.29
SNX21-208ENST00000466252 LINS1Q8NG48 757 aa29.35■■■□□ 2.29
SNX21-208ENST00000466252 NLRP3Q96P20 1036 aa29.35■■■□□ 2.29
SNX21-208ENST00000466252 PCCAP05165 728 aaPredicted RBP29.34■■■□□ 2.29
SNX21-208ENST00000466252 SMC4Q9NTJ3 1288 aa29.34■■■□□ 2.29
SNX21-208ENST00000466252 TNRC6CQ9HCJ0 1690 aaKnown RBP29.34■■■□□ 2.29
SNX21-208ENST00000466252 GOLGB1Q14789 3259 aaKnown RBP29.33■■■□□ 2.29
SNX21-208ENST00000466252 HOXA10P31260 410 aaPredicted RBP29.33■■■□□ 2.29
SNX21-208ENST00000466252 PTPRCP08575 1304 aa29.33■■■□□ 2.29
SNX21-208ENST00000466252 ARFGEF1Q9Y6D6 1849 aa29.32■■■□□ 2.28
SNX21-208ENST00000466252 H7C1W4 665 aa29.32■■■□□ 2.28
SNX21-208ENST00000466252 RTL5Q5HYW3 569 aaPredicted RBP29.32■■■□□ 2.28
SNX21-208ENST00000466252 CNKSR1Q969H4 720 aa29.32■■■□□ 2.28
SNX21-208ENST00000466252 GCKRQ14397 625 aa29.31■■■□□ 2.28
SNX21-208ENST00000466252 JARID2Q92833 1246 aaPredicted RBP29.31■■■□□ 2.28
SNX21-208ENST00000466252 SLX4Q8IY92 1834 aa29.3■■■□□ 2.28
SNX21-208ENST00000466252 IRS4O14654 1257 aaPredicted RBP29.3■■■□□ 2.28
SNX21-208ENST00000466252 NOB1Q9ULX3 412 aaKnown RBP29.3■■■□□ 2.28
SNX21-208ENST00000466252 C7orf43Q8WVR3 580 aa29.29■■■□□ 2.28
SNX21-208ENST00000466252 DDX60Q8IY21 1712 aaKnown RBP29.28■■■□□ 2.28
SNX21-208ENST00000466252 ALDH1B1P30837 517 aa29.28■■■□□ 2.28
SNX21-208ENST00000466252 SF3B3Q15393 1217 aaKnown RBP29.28■■■□□ 2.28
SNX21-208ENST00000466252 CRAMP1Q96RY5 1269 aa29.28■■■□□ 2.28
SNX21-208ENST00000466252 LAMB2P55268 1798 aa29.27■■■□□ 2.28
SNX21-208ENST00000466252 BCAR3O75815 825 aa29.27■■■□□ 2.28
SNX21-208ENST00000466252 CASP7P55210 303 aa29.27■■■□□ 2.28
SNX21-208ENST00000466252 UTRNP46939 3433 aa29.26■■■□□ 2.28
SNX21-208ENST00000466252 CDHR2Q9BYE9 1310 aa29.26■■■□□ 2.27
SNX21-208ENST00000466252 PRPF40BQ6NWY9 871 aaKnown RBP29.25■■■□□ 2.27
SNX21-208ENST00000466252 SLC4A10Q6U841 1118 aa29.25■■■□□ 2.27
SNX21-208ENST00000466252 RPGRQ92834 1020 aaKnown RBP29.25■■■□□ 2.27
SNX21-208ENST00000466252 PDE8AO60658 829 aa29.24■■■□□ 2.27
SNX21-208ENST00000466252 ALDH1L1O75891 902 aa29.24■■■□□ 2.27
SNX21-208ENST00000466252 ARHGAP45Q92619 1136 aa29.24■■■□□ 2.27
SNX21-208ENST00000466252 RBM17Q96I25 401 aaKnown RBP29.24■■■□□ 2.27
SNX21-208ENST00000466252 CHD4Q14839 1912 aa29.24■■■□□ 2.27
SNX21-208ENST00000466252 ARHGAP27Q6ZUM4 889 aa29.23■■■□□ 2.27
SNX21-208ENST00000466252 SRCIN1Q9C0H9 1055 aa29.23■■■□□ 2.27
SNX21-208ENST00000466252 C21orf2O43822 256 aa29.22■■■□□ 2.27
SNX21-208ENST00000466252 HSP90B1P14625 803 aaKnown RBP29.22■■■□□ 2.27
SNX21-208ENST00000466252 CACNA1SQ13698 1873 aa29.22■■■□□ 2.27
SNX21-208ENST00000466252 UBE3BQ7Z3V4 1068 aa29.21■■■□□ 2.27
SNX21-208ENST00000466252 PLA2G12BQ9BX93 195 aa29.2■■■□□ 2.26
SNX21-208ENST00000466252 TAF1P21675 1872 aa29.2■■■□□ 2.26
SNX21-208ENST00000466252 API5Q9BZZ5 524 aaKnown RBP29.19■■■□□ 2.26
SNX21-208ENST00000466252 ZNF219Q9P2Y4 722 aaPredicted RBP29.19■■■□□ 2.26
SNX21-208ENST00000466252 ABCC4O15439 1325 aa29.18■■■□□ 2.26
SNX21-208ENST00000466252 KIF16BQ96L93 1317 aa29.18■■■□□ 2.26
SNX21-208ENST00000466252 GRM8O00222 908 aa29.17■■■□□ 2.26
SNX21-208ENST00000466252 BBOX1O75936 387 aa29.17■■■□□ 2.26
SNX21-208ENST00000466252 DDX46Q7L014 1031 aaKnown RBP29.17■■■□□ 2.26
SNX21-208ENST00000466252 TTLL11Q8NHH1 800 aa29.17■■■□□ 2.26
SNX21-208ENST00000466252 UTYO14607 1347 aa29.17■■■□□ 2.26
SNX21-208ENST00000466252 IPO8O15397 1037 aaKnown RBP29.16■■■□□ 2.26
SNX21-208ENST00000466252 OLFM4Q6UX06 510 aa29.16■■■□□ 2.26
SNX21-208ENST00000466252 FER1L6Q2WGJ9 1857 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms