RNA–Protein interactions for RNA: ENST00000466223.1

AGRN-204, Transcript of agrin, humanhuman

TSL 2

Gene AGRN, Length 459 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-204ENST00000466223 NUTM1Q86Y26 1132 aa20.25■□□□□ 0.83
AGRN-204ENST00000466223 CCDC191Q8NCU4 936 aa20.25■□□□□ 0.83
AGRN-204ENST00000466223 CWC25Q9NXE8 425 aaPredicted RBP20.25■□□□□ 0.83
AGRN-204ENST00000466223 A0A0G2JLW4 131 aa20.24■□□□□ 0.83
AGRN-204ENST00000466223 NTSR2O95665 410 aa20.24■□□□□ 0.83
AGRN-204ENST00000466223 ERFEQ4G0M1 354 aa20.24■□□□□ 0.83
AGRN-204ENST00000466223 HSP90B1P14625 803 aaKnown RBP20.23■□□□□ 0.83
AGRN-204ENST00000466223 C2CD5Q86YS7 1000 aa20.23■□□□□ 0.83
AGRN-204ENST00000466223 SH3TC1Q8TE82 1336 aa20.23■□□□□ 0.83
AGRN-204ENST00000466223 F6X3S4 739 aa20.22■□□□□ 0.83
AGRN-204ENST00000466223 DPEP1P16444 411 aa20.22■□□□□ 0.83
AGRN-204ENST00000466223 BRPF1P55201 1214 aaPredicted RBP20.22■□□□□ 0.83
AGRN-204ENST00000466223 SLC4A10Q6U841 1118 aa20.22■□□□□ 0.83
AGRN-204ENST00000466223 PELP1Q8IZL8 1130 aaKnown RBP20.22■□□□□ 0.83
AGRN-204ENST00000466223 LINS1Q8NG48 757 aa20.22■□□□□ 0.83
AGRN-204ENST00000466223 KIF16BQ96L93 1317 aa20.22■□□□□ 0.83
AGRN-204ENST00000466223 IPO8O15397 1037 aaKnown RBP20.21■□□□□ 0.83
AGRN-204ENST00000466223 NLRP3Q96P20 1036 aa20.21■□□□□ 0.83
AGRN-204ENST00000466223 PIM2Q9P1W9 311 aa20.21■□□□□ 0.83
AGRN-204ENST00000466223 NOB1Q9ULX3 412 aaKnown RBP20.21■□□□□ 0.83
AGRN-204ENST00000466223 N4BP2Q86UW6 1770 aaPredicted RBP20.21■□□□□ 0.83
AGRN-204ENST00000466223 CHRNA5P30532 468 aa20.2■□□□□ 0.82
AGRN-204ENST00000466223 GPR162Q16538 588 aa20.2■□□□□ 0.82
AGRN-204ENST00000466223 CWF19L2Q2TBE0 894 aaKnown RBP20.2■□□□□ 0.82
AGRN-204ENST00000466223 SLC10A5Q5PT55 438 aa20.2■□□□□ 0.82
AGRN-204ENST00000466223 ZBTB38Q8NAP3 1195 aaPredicted RBP20.2■□□□□ 0.82
AGRN-204ENST00000466223 FAM89AQ96GI7 184 aa20.2■□□□□ 0.82
AGRN-204ENST00000466223 API5Q9BZZ5 524 aaKnown RBP20.2■□□□□ 0.82
AGRN-204ENST00000466223 PXDNLA1KZ92 1463 aa20.19■□□□□ 0.82
AGRN-204ENST00000466223 NEURL1BA8MQ27 555 aa20.19■□□□□ 0.82
AGRN-204ENST00000466223 IGKV5-2P06315 115 aa20.19■□□□□ 0.82
AGRN-204ENST00000466223 ZNF622Q969S3 477 aaKnown RBP eCLIP20.19■□□□□ 0.82
AGRN-204ENST00000466223 SRCIN1Q9C0H9 1055 aa20.19■□□□□ 0.82
AGRN-204ENST00000466223 ANKRD31Q8N7Z5 1873 aa20.18■□□□□ 0.82
AGRN-204ENST00000466223 BCAR3O75815 825 aa20.18■□□□□ 0.82
AGRN-204ENST00000466223 PCCAP05165 728 aaPredicted RBP20.18■□□□□ 0.82
AGRN-204ENST00000466223 RTL5Q5HYW3 569 aaPredicted RBP20.18■□□□□ 0.82
AGRN-204ENST00000466223 ARHGAP45Q92619 1136 aa20.18■□□□□ 0.82
AGRN-204ENST00000466223 FRAT1Q92837 279 aaPredicted RBP20.18■□□□□ 0.82
AGRN-204ENST00000466223 MASTLQ96GX5 879 aa20.18■□□□□ 0.82
AGRN-204ENST00000466223 HCLS1P14317 486 aaPredicted RBP20.17■□□□□ 0.82
AGRN-204ENST00000466223 DALRD3Q5D0E6 543 aaKnown RBP20.17■□□□□ 0.82
AGRN-204ENST00000466223 BEND3Q5T5X7 828 aa20.17■□□□□ 0.82
AGRN-204ENST00000466223 WWC3Q9ULE0 1092 aa20.17■□□□□ 0.82
AGRN-204ENST00000466223 ABCC12Q96J65 1359 aa20.17■□□□□ 0.82
AGRN-204ENST00000466223 RIC1Q4ADV7 1423 aa20.17■□□□□ 0.82
AGRN-204ENST00000466223 KLRG2A4D1S0 409 aaPredicted RBP20.16■□□□□ 0.82
AGRN-204ENST00000466223 IRS4O14654 1257 aaPredicted RBP20.16■□□□□ 0.82
AGRN-204ENST00000466223 ALDH1L1O75891 902 aa20.16■□□□□ 0.82
AGRN-204ENST00000466223 SRGNP10124 158 aa20.16■□□□□ 0.82
AGRN-204ENST00000466223 NPR1P16066 1061 aa20.16■□□□□ 0.82
AGRN-204ENST00000466223 KCNA3P22001 575 aa20.16■□□□□ 0.82
AGRN-204ENST00000466223 YY1P25490 414 aa20.16■□□□□ 0.82
AGRN-204ENST00000466223 GCKRQ14397 625 aa20.16■□□□□ 0.82
AGRN-204ENST00000466223 TTLL6Q8N841 843 aa20.16■□□□□ 0.82
AGRN-204ENST00000466223 RPGRQ92834 1020 aaKnown RBP20.16■□□□□ 0.82
AGRN-204ENST00000466223 CNKSR1Q969H4 720 aa20.16■□□□□ 0.82
AGRN-204ENST00000466223 BCS1LQ9Y276 419 aa20.16■□□□□ 0.82
AGRN-204ENST00000466223 ALDH1B1P30837 517 aa20.15■□□□□ 0.82
AGRN-204ENST00000466223 STYK1Q6J9G0 422 aa20.15■□□□□ 0.82
AGRN-204ENST00000466223 SYNE4Q8N205 404 aa20.15■□□□□ 0.82
AGRN-204ENST00000466223 C9orf78Q9NZ63 289 aaPredicted RBP20.15■□□□□ 0.82
AGRN-204ENST00000466223 KIAA1551Q9HCM1 1747 aa20.15■□□□□ 0.82
AGRN-204ENST00000466223 GRIN3BO60391 1043 aa20.14■□□□□ 0.81
AGRN-204ENST00000466223 ZKSCAN2Q63HK3 967 aa20.14■□□□□ 0.81
AGRN-204ENST00000466223 RBM17Q96I25 401 aaKnown RBP20.14■□□□□ 0.81
AGRN-204ENST00000466223 RCAN3Q9UKA8 241 aa20.14■□□□□ 0.81
AGRN-204ENST00000466223 H7C1W4 665 aa20.13■□□□□ 0.81
AGRN-204ENST00000466223 CCT4P50991 539 aaKnown RBP20.13■□□□□ 0.81
AGRN-204ENST00000466223 ATF7IPQ6VMQ6 1270 aa20.13■□□□□ 0.81
AGRN-204ENST00000466223 UBE3BQ7Z3V4 1068 aa20.13■□□□□ 0.81
AGRN-204ENST00000466223 JARID2Q92833 1246 aaPredicted RBP20.13■□□□□ 0.81
AGRN-204ENST00000466223 CDHR2Q9BYE9 1310 aa20.12■□□□□ 0.81
AGRN-204ENST00000466223 PDE8AO60658 829 aa20.12■□□□□ 0.81
AGRN-204ENST00000466223 CRY2Q49AN0 593 aa20.12■□□□□ 0.81
AGRN-204ENST00000466223 DLEC1Q9Y238 1755 aa20.12■□□□□ 0.81
AGRN-204ENST00000466223 DDX46Q7L014 1031 aaKnown RBP20.11■□□□□ 0.81
AGRN-204ENST00000466223 BRCA1P38398 1863 aaKnown RBP20.11■□□□□ 0.81
AGRN-204ENST00000466223 TNRC6CQ9HCJ0 1690 aaKnown RBP20.1■□□□□ 0.81
AGRN-204ENST00000466223 GRM8O00222 908 aa20.1■□□□□ 0.81
AGRN-204ENST00000466223 HOXA10P31260 410 aaPredicted RBP20.1■□□□□ 0.81
AGRN-204ENST00000466223 COL11A2P13942 1736 aaPredicted RBP20.1■□□□□ 0.81
AGRN-204ENST00000466223 YBX3P16989 372 aaKnown RBP eCLIP20.09■□□□□ 0.81
AGRN-204ENST00000466223 SF3B3Q15393 1217 aaKnown RBP20.09■□□□□ 0.81
AGRN-204ENST00000466223 CCDC152Q4G0S7 254 aa20.09■□□□□ 0.81
AGRN-204ENST00000466223 C3orf67Q6ZVT6 689 aa20.09■□□□□ 0.81
AGRN-204ENST00000466223 CRAMP1Q96RY5 1269 aa20.09■□□□□ 0.81
AGRN-204ENST00000466223 DDX60Q8IY21 1712 aaKnown RBP20.09■□□□□ 0.81
AGRN-204ENST00000466223 MS4A1P11836 297 aa20.08■□□□□ 0.81
AGRN-204ENST00000466223 TRIM27P14373 513 aa20.08■□□□□ 0.81
AGRN-204ENST00000466223 FTSJ3Q8IY81 847 aaKnown RBP20.08■□□□□ 0.81
AGRN-204ENST00000466223 TMX4Q9H1E5 349 aaPredicted RBP20.08■□□□□ 0.81
AGRN-204ENST00000466223 LAMB2P55268 1798 aa20.08■□□□□ 0.8
AGRN-204ENST00000466223 PRPF40BQ6NWY9 871 aaKnown RBP20.07■□□□□ 0.8
AGRN-204ENST00000466223 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.07■□□□□ 0.8
AGRN-204ENST00000466223 CLUAP1Q96AJ1 413 aa20.07■□□□□ 0.8
AGRN-204ENST00000466223 CACNA1SQ13698 1873 aa20.07■□□□□ 0.8
AGRN-204ENST00000466223 SOGA3Q5TF21 947 aa20.06■□□□□ 0.8
AGRN-204ENST00000466223 ARHGAP27Q6ZUM4 889 aa20.06■□□□□ 0.8
AGRN-204ENST00000466223 PLA2G12BQ9BX93 195 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms