RNA–Protein interactions for RNA: ENST00000465997.1

SNX21-207, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-207ENST00000465997 NFKBIEO00221 500 aa17.89■□□□□ 0.45
SNX21-207ENST00000465997 GRIPAP1Q4V328 841 aa17.89■□□□□ 0.45
SNX21-207ENST00000465997 CC2D2BQ6DHV5 1058 aa17.89■□□□□ 0.45
SNX21-207ENST00000465997 NLRP10Q86W26 655 aa17.89■□□□□ 0.45
SNX21-207ENST00000465997 RTKN2Q8IZC4 609 aa17.89■□□□□ 0.45
SNX21-207ENST00000465997 C8orf58Q8NAV2 365 aa17.89■□□□□ 0.45
SNX21-207ENST00000465997 C7orf43Q8WVR3 580 aa17.89■□□□□ 0.45
SNX21-207ENST00000465997 RPGRQ92834 1020 aaKnown RBP17.89■□□□□ 0.45
SNX21-207ENST00000465997 SLX4Q8IY92 1834 aa17.88■□□□□ 0.45
SNX21-207ENST00000465997 ELL2O00472 640 aaPredicted RBP17.88■□□□□ 0.45
SNX21-207ENST00000465997 RASSF7Q02833 373 aa17.88■□□□□ 0.45
SNX21-207ENST00000465997 TRIM28Q13263 835 aaKnown RBP17.88■□□□□ 0.45
SNX21-207ENST00000465997 CCDC93Q567U6 631 aa17.88■□□□□ 0.45
SNX21-207ENST00000465997 RBM17Q96I25 401 aaKnown RBP17.88■□□□□ 0.45
SNX21-207ENST00000465997 CRAMP1Q96RY5 1269 aa17.88■□□□□ 0.45
SNX21-207ENST00000465997 TAOK3Q9H2K8 898 aa17.88■□□□□ 0.45
SNX21-207ENST00000465997 ABCC12Q96J65 1359 aa17.88■□□□□ 0.45
SNX21-207ENST00000465997 FER1L6Q2WGJ9 1857 aa17.88■□□□□ 0.45
SNX21-207ENST00000465997 GOLGA2Q08379 1002 aa17.87■□□□□ 0.45
SNX21-207ENST00000465997 FAM9BQ8IZU0 186 aa17.87■□□□□ 0.45
SNX21-207ENST00000465997 ZNF219Q9P2Y4 722 aaPredicted RBP17.87■□□□□ 0.45
SNX21-207ENST00000465997 DDX58O95786 925 aaKnown RBP17.86■□□□□ 0.45
SNX21-207ENST00000465997 ISCA1Q9BUE6 129 aa17.86■□□□□ 0.45
SNX21-207ENST00000465997 TRMT112Q9UI30 125 aaKnown RBP17.86■□□□□ 0.45
SNX21-207ENST00000465997 SH3TC1Q8TE82 1336 aa17.86■□□□□ 0.45
SNX21-207ENST00000465997 KIF3CO14782 793 aa17.85■□□□□ 0.45
SNX21-207ENST00000465997 DPY19L2Q6NUT2 758 aa17.85■□□□□ 0.45
SNX21-207ENST00000465997 RIC3Q7Z5B4 369 aa17.85■□□□□ 0.45
SNX21-207ENST00000465997 TSR2Q969E8 191 aaKnown RBP17.85■□□□□ 0.45
SNX21-207ENST00000465997 STK31Q9BXU1 1019 aa17.85■□□□□ 0.45
SNX21-207ENST00000465997 CACNA1SQ13698 1873 aa17.84■□□□□ 0.45
SNX21-207ENST00000465997 TNRC6CQ9HCJ0 1690 aaKnown RBP17.84■□□□□ 0.45
SNX21-207ENST00000465997 GLTPD2A6NH11 291 aa17.84■□□□□ 0.45
SNX21-207ENST00000465997 HSP90B1P14625 803 aaKnown RBP17.84■□□□□ 0.45
SNX21-207ENST00000465997 FKBP4Q02790 459 aaKnown RBP eCLIP17.84■□□□□ 0.45
SNX21-207ENST00000465997 TWISTNBQ3B726 338 aaPredicted RBP17.84■□□□□ 0.45
SNX21-207ENST00000465997 DICER1Q9UPY3 1922 aaKnown RBP17.83■□□□□ 0.44
SNX21-207ENST00000465997 TOMM70O94826 608 aa17.83■□□□□ 0.44
SNX21-207ENST00000465997 PRELPP51888 382 aa17.83■□□□□ 0.44
SNX21-207ENST00000465997 TSPYL6Q8N831 410 aa17.83■□□□□ 0.44
SNX21-207ENST00000465997 TMX4Q9H1E5 349 aaPredicted RBP17.83■□□□□ 0.44
SNX21-207ENST00000465997 PHAXQ9H814 394 aaKnown RBP17.83■□□□□ 0.44
SNX21-207ENST00000465997 CCDC88AQ3V6T2 1871 aa17.83■□□□□ 0.44
SNX21-207ENST00000465997 BBOX1O75936 387 aa17.81■□□□□ 0.44
SNX21-207ENST00000465997 PSMD1Q99460 953 aa17.81■□□□□ 0.44
SNX21-207ENST00000465997 MYH16Q9H6N6 1097 aa17.81■□□□□ 0.44
SNX21-207ENST00000465997 NMRK2Q9NPI5 230 aa17.81■□□□□ 0.44
SNX21-207ENST00000465997 FANCIQ9NVI1 1328 aa17.8■□□□□ 0.44
SNX21-207ENST00000465997 C16orf71Q8IYS4 520 aaPredicted RBP17.8■□□□□ 0.44
SNX21-207ENST00000465997 CCDC191Q8NCU4 936 aa17.8■□□□□ 0.44
SNX21-207ENST00000465997 SALL2Q9Y467 1007 aaPredicted RBP17.8■□□□□ 0.44
SNX21-207ENST00000465997 TIAM2Q8IVF5 1701 aa17.79■□□□□ 0.44
SNX21-207ENST00000465997 ATP5J2-PTCD1G3V325 749 aa17.79■□□□□ 0.44
SNX21-207ENST00000465997 PPEF1O14829 653 aaPredicted RBP17.79■□□□□ 0.44
SNX21-207ENST00000465997 HCLS1P14317 486 aaPredicted RBP17.79■□□□□ 0.44
SNX21-207ENST00000465997 VEGFAP15692 232 aaPredicted RBP17.79■□□□□ 0.44
SNX21-207ENST00000465997 KSR2Q6VAB6 950 aa17.79■□□□□ 0.44
SNX21-207ENST00000465997 DDX46Q7L014 1031 aaKnown RBP17.79■□□□□ 0.44
SNX21-207ENST00000465997 TMC4Q7Z404 712 aa17.79■□□□□ 0.44
SNX21-207ENST00000465997 METTL22Q9BUU2 404 aaPredicted RBP17.79■□□□□ 0.44
SNX21-207ENST00000465997 VPS33BQ9H267 617 aa17.79■□□□□ 0.44
SNX21-207ENST00000465997 SENP3-EIF4A1A0A087X0R7 540 aa17.78■□□□□ 0.44
SNX21-207ENST00000465997 CCER2I3L3R5 266 aa17.78■□□□□ 0.44
SNX21-207ENST00000465997 SF3B3Q15393 1217 aaKnown RBP17.78■□□□□ 0.44
SNX21-207ENST00000465997 C3orf67Q6ZVT6 689 aa17.78■□□□□ 0.44
SNX21-207ENST00000465997 SYNE4Q8N205 404 aa17.78■□□□□ 0.44
SNX21-207ENST00000465997 ZBTB38Q8NAP3 1195 aaPredicted RBP17.78■□□□□ 0.44
SNX21-207ENST00000465997 RBM46Q8TBY0 533 aaKnown RBP17.78■□□□□ 0.44
SNX21-207ENST00000465997 RRAGCQ9HB90 399 aa17.78■□□□□ 0.44
SNX21-207ENST00000465997 ATP6V0A2Q9Y487 856 aa17.78■□□□□ 0.44
SNX21-207ENST00000465997 VAMP4O75379 141 aa17.77■□□□□ 0.44
SNX21-207ENST00000465997 SLC4A2P04920 1241 aa17.77■□□□□ 0.44
SNX21-207ENST00000465997 IARSP41252 1262 aaKnown RBP17.77■□□□□ 0.44
SNX21-207ENST00000465997 NEXNQ0ZGT2 675 aa17.77■□□□□ 0.44
SNX21-207ENST00000465997 SP8Q8IXZ3 490 aa17.77■□□□□ 0.44
SNX21-207ENST00000465997 FAM89AQ96GI7 184 aa17.77■□□□□ 0.44
SNX21-207ENST00000465997 MYD88Q99836 296 aa17.77■□□□□ 0.44
SNX21-207ENST00000465997 CACNA1FO60840 1977 aa17.77■□□□□ 0.43
SNX21-207ENST00000465997 ABCC4O15439 1325 aa17.76■□□□□ 0.43
SNX21-207ENST00000465997 SNED1Q8TER0 1413 aa17.76■□□□□ 0.43
SNX21-207ENST00000465997 PCCAP05165 728 aaPredicted RBP17.76■□□□□ 0.43
SNX21-207ENST00000465997 GRAPQ13588 217 aa17.76■□□□□ 0.43
SNX21-207ENST00000465997 SUPT20HQ8NEM7 779 aa17.76■□□□□ 0.43
SNX21-207ENST00000465997 GRAPLQ8TC17 118 aaPredicted RBP17.76■□□□□ 0.43
SNX21-207ENST00000465997 CWC25Q9NXE8 425 aaPredicted RBP17.76■□□□□ 0.43
SNX21-207ENST00000465997 MAP3K2Q9Y2U5 619 aa17.76■□□□□ 0.43
SNX21-207ENST00000465997 PI4KAP2A4QPH2 592 aa17.75■□□□□ 0.43
SNX21-207ENST00000465997 IRS4O14654 1257 aaPredicted RBP17.75■□□□□ 0.43
SNX21-207ENST00000465997 EXOSC9Q06265 439 aaKnown RBP17.75■□□□□ 0.43
SNX21-207ENST00000465997 FSTL1Q12841 308 aa17.75■□□□□ 0.43
SNX21-207ENST00000465997 OLFM4Q6UX06 510 aa17.75■□□□□ 0.43
SNX21-207ENST00000465997 PI4KAP1Q8N8J0 262 aa17.75■□□□□ 0.43
SNX21-207ENST00000465997 JDP2Q8WYK2 163 aa17.75■□□□□ 0.43
SNX21-207ENST00000465997 ZNF277Q9NRM2 450 aaPredicted RBP17.75■□□□□ 0.43
SNX21-207ENST00000465997 LAMB2P55268 1798 aa17.75■□□□□ 0.43
SNX21-207ENST00000465997 ZNF521Q96K83 1311 aa17.74■□□□□ 0.43
SNX21-207ENST00000465997 HSPA6P17066 643 aa17.74■□□□□ 0.43
SNX21-207ENST00000465997 WDR90Q96KV7 1748 aa17.74■□□□□ 0.43
SNX21-207ENST00000465997 DDX60Q8IY21 1712 aaKnown RBP17.73■□□□□ 0.43
SNX21-207ENST00000465997 FLIIQ13045 1269 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms