RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 TJP1Q07157 1748 aa12.59□□□□□ -0.39
ATG3-203ENST00000465980 HMGB2P26583 209 aaKnown RBP12.58□□□□□ -0.4
ATG3-203ENST00000465980 E2F4Q16254 413 aa12.58□□□□□ -0.4
ATG3-203ENST00000465980 SLC4A9Q96Q91 983 aa12.58□□□□□ -0.4
ATG3-203ENST00000465980 PTCD1O75127 700 aaKnown RBP12.57□□□□□ -0.4
ATG3-203ENST00000465980 SSFA2P28290 1259 aa12.57□□□□□ -0.4
ATG3-203ENST00000465980 HPS5Q9UPZ3 1129 aa12.57□□□□□ -0.4
ATG3-203ENST00000465980 COL3A1P02461 1466 aaPredicted RBP12.57□□□□□ -0.4
ATG3-203ENST00000465980 DIAPH1O60610 1272 aaKnown RBP12.56□□□□□ -0.4
ATG3-203ENST00000465980 NFATC2IPQ8NCF5 419 aa12.56□□□□□ -0.4
ATG3-203ENST00000465980 WWC3Q9ULE0 1092 aa12.56□□□□□ -0.4
ATG3-203ENST00000465980 MYBBP1AQ9BQG0 1328 aaKnown RBP12.56□□□□□ -0.4
ATG3-203ENST00000465980 N4BP2Q86UW6 1770 aaPredicted RBP12.56□□□□□ -0.4
ATG3-203ENST00000465980 U2SURPO15042 1029 aaKnown RBP12.55□□□□□ -0.4
ATG3-203ENST00000465980 YBX3P16989 372 aaKnown RBP eCLIP12.54□□□□□ -0.4
ATG3-203ENST00000465980 AKAP4Q5JQC9 854 aa12.54□□□□□ -0.4
ATG3-203ENST00000465980 RTCBQ9Y3I0 505 aaKnown RBP12.54□□□□□ -0.4
ATG3-203ENST00000465980 CICQ96RK0 1608 aaPredicted RBP12.54□□□□□ -0.4
ATG3-203ENST00000465980 ADAMTS7Q9UKP4 1686 aa12.54□□□□□ -0.4
ATG3-203ENST00000465980 MRC1P22897 1456 aa12.53□□□□□ -0.4
ATG3-203ENST00000465980 KIF13BQ9NQT8 1826 aa12.53□□□□□ -0.4
ATG3-203ENST00000465980 ZNF784Q8NCA9 323 aaPredicted RBP12.53□□□□□ -0.4
ATG3-203ENST00000465980 CDCA7LQ96GN5 454 aa12.53□□□□□ -0.4
ATG3-203ENST00000465980 LGR6Q9HBX8 967 aa12.53□□□□□ -0.4
ATG3-203ENST00000465980 UBR2Q8IWV8 1755 aa12.53□□□□□ -0.4
ATG3-203ENST00000465980 SIPA1L3O60292 1781 aaPredicted RBP12.52□□□□□ -0.41
ATG3-203ENST00000465980 MMP10P09238 476 aa12.52□□□□□ -0.41
ATG3-203ENST00000465980 PRSS12P56730 875 aa12.52□□□□□ -0.41
ATG3-203ENST00000465980 MTHFSDQ2M296 383 aaKnown RBP12.52□□□□□ -0.41
ATG3-203ENST00000465980 SLC52A2Q9HAB3 445 aa12.52□□□□□ -0.41
ATG3-203ENST00000465980 WDR70Q9NW82 654 aa12.52□□□□□ -0.41
ATG3-203ENST00000465980 CD2APQ9Y5K6 639 aa12.52□□□□□ -0.41
ATG3-203ENST00000465980 CNTNAP4Q9C0A0 1308 aa12.52□□□□□ -0.41
ATG3-203ENST00000465980 KIAA1551Q9HCM1 1747 aa12.51□□□□□ -0.41
ATG3-203ENST00000465980 RNMTO43148 476 aaKnown RBP12.51□□□□□ -0.41
ATG3-203ENST00000465980 CRKLP46109 303 aaKnown RBP12.51□□□□□ -0.41
ATG3-203ENST00000465980 SLC39A6Q13433 755 aa12.51□□□□□ -0.41
ATG3-203ENST00000465980 TRAPPC3LQ5T215 181 aa12.51□□□□□ -0.41
ATG3-203ENST00000465980 ARHGEF1Q92888 912 aaKnown RBP12.51□□□□□ -0.41
ATG3-203ENST00000465980 RFC4P35249 363 aa12.5□□□□□ -0.41
ATG3-203ENST00000465980 CCDC184Q52MB2 194 aa12.5□□□□□ -0.41
ATG3-203ENST00000465980 RC3H1Q5TC82 1133 aaKnown RBP12.5□□□□□ -0.41
ATG3-203ENST00000465980 MRS2Q9HD23 443 aa12.5□□□□□ -0.41
ATG3-203ENST00000465980 KCPQ6ZWJ8 1503 aa12.5□□□□□ -0.41
ATG3-203ENST00000465980 BRCA1P38398 1863 aaKnown RBP12.49□□□□□ -0.41
ATG3-203ENST00000465980 RPS6KA4O75676 772 aa12.49□□□□□ -0.41
ATG3-203ENST00000465980 PPP2R1AP30153 589 aa12.49□□□□□ -0.41
ATG3-203ENST00000465980 DNAJC10Q8IXB1 793 aa12.49□□□□□ -0.41
ATG3-203ENST00000465980 SRP68Q9UHB9 627 aaKnown RBP12.49□□□□□ -0.41
ATG3-203ENST00000465980 AFDNP55196 1824 aaKnown RBP12.48□□□□□ -0.41
ATG3-203ENST00000465980 NBPF26B4DH59 902 aa12.48□□□□□ -0.41
ATG3-203ENST00000465980 GRIN3BO60391 1043 aa12.48□□□□□ -0.41
ATG3-203ENST00000465980 GYS1P13807 737 aa12.48□□□□□ -0.41
ATG3-203ENST00000465980 PPP4CP60510 307 aa12.48□□□□□ -0.41
ATG3-203ENST00000465980 CFAP53Q96M91 514 aa12.48□□□□□ -0.41
ATG3-203ENST00000465980 RBM27Q9P2N5 1060 aaKnown RBP12.48□□□□□ -0.41
ATG3-203ENST00000465980 DLG5Q8TDM6 1919 aa12.48□□□□□ -0.41
ATG3-203ENST00000465980 PXDNLA1KZ92 1463 aa12.46□□□□□ -0.41
ATG3-203ENST00000465980 CEP350Q5VT06 3117 aa12.46□□□□□ -0.41
ATG3-203ENST00000465980 GRXCR2A6NFK2 248 aa12.46□□□□□ -0.41
ATG3-203ENST00000465980 PRKAR2BP31323 418 aa12.46□□□□□ -0.41
ATG3-203ENST00000465980 INTS5Q6P9B9 1019 aaKnown RBP12.46□□□□□ -0.41
ATG3-203ENST00000465980 NLGN1Q8N2Q7 840 aa12.46□□□□□ -0.41
ATG3-203ENST00000465980 CCDC87Q9NVE4 849 aa12.46□□□□□ -0.41
ATG3-203ENST00000465980 FAM198AQ9UFP1 575 aa12.46□□□□□ -0.41
ATG3-203ENST00000465980 C10orf71Q711Q0 1435 aa12.45□□□□□ -0.42
ATG3-203ENST00000465980 USP42Q9H9J4 1324 aaKnown RBP12.45□□□□□ -0.42
ATG3-203ENST00000465980 GNAT3A8MTJ3 354 aa12.45□□□□□ -0.42
ATG3-203ENST00000465980 TEFQ10587 303 aa12.45□□□□□ -0.42
ATG3-203ENST00000465980 SAMD7Q7Z3H4 446 aa12.45□□□□□ -0.42
ATG3-203ENST00000465980 GAS2L2Q8NHY3 880 aa12.45□□□□□ -0.42
ATG3-203ENST00000465980 TATDN2Q93075 761 aa12.45□□□□□ -0.42
ATG3-203ENST00000465980 PARP3Q9Y6F1 533 aa12.45□□□□□ -0.42
ATG3-203ENST00000465980 ARFGEF1Q9Y6D6 1849 aa12.45□□□□□ -0.42
ATG3-203ENST00000465980 A0A0G2JLW4 131 aa12.44□□□□□ -0.42
ATG3-203ENST00000465980 U2AF1L5P0DN76 240 aaPredicted RBP12.44□□□□□ -0.42
ATG3-203ENST00000465980 CYP19A1P11511 503 aaPredicted RBP12.44□□□□□ -0.42
ATG3-203ENST00000465980 OSBPP22059 807 aa12.44□□□□□ -0.42
ATG3-203ENST00000465980 U2AF1Q01081 240 aaKnown RBP eCLIP12.44□□□□□ -0.42
ATG3-203ENST00000465980 PAXIP1Q6ZW49 1069 aaPredicted RBP12.44□□□□□ -0.42
ATG3-203ENST00000465980 TTC5Q8N0Z6 440 aa12.44□□□□□ -0.42
ATG3-203ENST00000465980 IL17REQ8NFR9 667 aa12.44□□□□□ -0.42
ATG3-203ENST00000465980 PHACTR3Q96KR7 559 aa12.44□□□□□ -0.42
ATG3-203ENST00000465980 RSPH6AQ9H0K4 717 aa12.44□□□□□ -0.42
ATG3-203ENST00000465980 SOS1Q07889 1333 aaPredicted RBP12.43□□□□□ -0.42
ATG3-203ENST00000465980 SMAPO00193 183 aa12.43□□□□□ -0.42
ATG3-203ENST00000465980 PNISRQ8TF01 805 aaKnown RBP12.43□□□□□ -0.42
ATG3-203ENST00000465980 CFAP44Q96MT7 982 aa12.43□□□□□ -0.42
ATG3-203ENST00000465980 PNMA3Q9UL41 463 aa12.43□□□□□ -0.42
ATG3-203ENST00000465980 NUDCQ9Y266 331 aa12.43□□□□□ -0.42
ATG3-203ENST00000465980 ZBTB1Q9Y2K1 713 aa12.43□□□□□ -0.42
ATG3-203ENST00000465980 ATP10DQ9P241 1426 aa12.43□□□□□ -0.42
ATG3-203ENST00000465980 COL15A1P39059 1388 aa12.43□□□□□ -0.42
ATG3-203ENST00000465980 ZPR1O75312 459 aa12.42□□□□□ -0.42
ATG3-203ENST00000465980 CANXP27824 592 aaKnown RBP12.42□□□□□ -0.42
ATG3-203ENST00000465980 DDR1Q08345 913 aa12.42□□□□□ -0.42
ATG3-203ENST00000465980 USPL1Q5W0Q7 1092 aa12.42□□□□□ -0.42
ATG3-203ENST00000465980 SCN7AQ01118 1682 aa12.42□□□□□ -0.42
ATG3-203ENST00000465980 DPEP1P16444 411 aa12.41□□□□□ -0.42
ATG3-203ENST00000465980 FAM9BQ8IZU0 186 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms