RNA–Protein interactions for RNA: ENST00000465934.1

CACNA1C-224, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-224ENST00000465934 IFT57Q9NWB7 429 aa18.29■□□□□ 0.52
CACNA1C-224ENST00000465934 RIC1Q4ADV7 1423 aa18.29■□□□□ 0.52
CACNA1C-224ENST00000465934 ARFGEF2Q9Y6D5 1785 aa18.29■□□□□ 0.52
CACNA1C-224ENST00000465934 CACNA1SQ13698 1873 aa18.29■□□□□ 0.52
CACNA1C-224ENST00000465934 ALDH1B1P30837 517 aa18.28■□□□□ 0.52
CACNA1C-224ENST00000465934 NLRP10Q86W26 655 aa18.28■□□□□ 0.52
CACNA1C-224ENST00000465934 SYNE4Q8N205 404 aa18.28■□□□□ 0.52
CACNA1C-224ENST00000465934 RPGRQ92834 1020 aaKnown RBP18.28■□□□□ 0.52
CACNA1C-224ENST00000465934 ZNF277Q9NRM2 450 aaPredicted RBP18.28■□□□□ 0.52
CACNA1C-224ENST00000465934 POTECB2RU33 542 aa18.27■□□□□ 0.52
CACNA1C-224ENST00000465934 ELL2O00472 640 aaPredicted RBP18.27■□□□□ 0.52
CACNA1C-224ENST00000465934 HOXA10P31260 410 aaPredicted RBP18.27■□□□□ 0.52
CACNA1C-224ENST00000465934 FKBP4Q02790 459 aaKnown RBP eCLIP18.27■□□□□ 0.52
CACNA1C-224ENST00000465934 DBF4Q9UBU7 674 aaPredicted RBP18.27■□□□□ 0.52
CACNA1C-224ENST00000465934 SNED1Q8TER0 1413 aa18.26■□□□□ 0.51
CACNA1C-224ENST00000465934 GNAI1P63096 354 aa18.26■□□□□ 0.51
CACNA1C-224ENST00000465934 TCIRG1Q13488 830 aa18.26■□□□□ 0.51
CACNA1C-224ENST00000465934 TCERG1O14776 1098 aaKnown RBP18.25■□□□□ 0.51
CACNA1C-224ENST00000465934 DDNO94850 711 aaPredicted RBP18.25■□□□□ 0.51
CACNA1C-224ENST00000465934 HCLS1P14317 486 aaPredicted RBP18.25■□□□□ 0.51
CACNA1C-224ENST00000465934 VEGFAP15692 232 aaPredicted RBP18.25■□□□□ 0.51
CACNA1C-224ENST00000465934 CALD1Q05682 793 aaKnown RBP18.25■□□□□ 0.51
CACNA1C-224ENST00000465934 HSP90AB3PQ58FF7 597 aa18.25■□□□□ 0.51
CACNA1C-224ENST00000465934 RTKN2Q8IZC4 609 aa18.25■□□□□ 0.51
CACNA1C-224ENST00000465934 C8orf58Q8NAV2 365 aa18.25■□□□□ 0.51
CACNA1C-224ENST00000465934 MRS2Q9HD23 443 aa18.25■□□□□ 0.51
CACNA1C-224ENST00000465934 SLC10A5Q5PT55 438 aa18.24■□□□□ 0.51
CACNA1C-224ENST00000465934 DPY19L2Q6NUT2 758 aa18.24■□□□□ 0.51
CACNA1C-224ENST00000465934 PLBD2Q8NHP8 589 aa18.24■□□□□ 0.51
CACNA1C-224ENST00000465934 RBM17Q96I25 401 aaKnown RBP18.24■□□□□ 0.51
CACNA1C-224ENST00000465934 NLRP3Q96P20 1036 aa18.24■□□□□ 0.51
CACNA1C-224ENST00000465934 PPEF1O14829 653 aaPredicted RBP18.23■□□□□ 0.51
CACNA1C-224ENST00000465934 ANP32CO43423 234 aa18.23■□□□□ 0.51
CACNA1C-224ENST00000465934 HTRA3P83110 453 aa18.23■□□□□ 0.51
CACNA1C-224ENST00000465934 FSTL1Q12841 308 aa18.23■□□□□ 0.51
CACNA1C-224ENST00000465934 ANKRD13DQ6ZTN6 518 aa18.23■□□□□ 0.51
CACNA1C-224ENST00000465934 TSR2Q969E8 191 aaKnown RBP18.23■□□□□ 0.51
CACNA1C-224ENST00000465934 CRAMP1Q96RY5 1269 aa18.23■□□□□ 0.51
CACNA1C-224ENST00000465934 HYPKQ9NX55 129 aa18.23■□□□□ 0.51
CACNA1C-224ENST00000465934 TRMT112Q9UI30 125 aaKnown RBP18.23■□□□□ 0.51
CACNA1C-224ENST00000465934 ZNF541Q9H0D2 1346 aa18.23■□□□□ 0.51
CACNA1C-224ENST00000465934 CCDC88AQ3V6T2 1871 aa18.22■□□□□ 0.51
CACNA1C-224ENST00000465934 ATP5J2-PTCD1G3V325 749 aa18.22■□□□□ 0.51
CACNA1C-224ENST00000465934 APLP1P51693 650 aa18.22■□□□□ 0.51
CACNA1C-224ENST00000465934 TSPYL6Q8N831 410 aa18.22■□□□□ 0.51
CACNA1C-224ENST00000465934 PHAXQ9H814 394 aaKnown RBP18.22■□□□□ 0.51
CACNA1C-224ENST00000465934 ABCC4O15439 1325 aa18.22■□□□□ 0.51
CACNA1C-224ENST00000465934 IARSP41252 1262 aaKnown RBP18.21■□□□□ 0.51
CACNA1C-224ENST00000465934 SMC1BQ8NDV3 1235 aa18.21■□□□□ 0.51
CACNA1C-224ENST00000465934 ISCA1Q9BUE6 129 aa18.21■□□□□ 0.51
CACNA1C-224ENST00000465934 RNF123Q5XPI4 1314 aa18.21■□□□□ 0.51
CACNA1C-224ENST00000465934 SH3TC1Q8TE82 1336 aa18.21■□□□□ 0.51
CACNA1C-224ENST00000465934 WDR90Q96KV7 1748 aa18.2■□□□□ 0.5
CACNA1C-224ENST00000465934 WWC1Q8IX03 1113 aa18.2■□□□□ 0.5
CACNA1C-224ENST00000465934 PSMD1Q99460 953 aa18.2■□□□□ 0.5
CACNA1C-224ENST00000465934 COL4A5P29400 1685 aa18.19■□□□□ 0.5
CACNA1C-224ENST00000465934 POTEIP0CG38 1075 aa18.19■□□□□ 0.5
CACNA1C-224ENST00000465934 POTEJP0CG39 1038 aa18.19■□□□□ 0.5
CACNA1C-224ENST00000465934 CCDC27Q2M243 656 aa18.19■□□□□ 0.5
CACNA1C-224ENST00000465934 RTL5Q5HYW3 569 aaPredicted RBP18.19■□□□□ 0.5
CACNA1C-224ENST00000465934 CC2D2BQ6DHV5 1058 aa18.19■□□□□ 0.5
CACNA1C-224ENST00000465934 FAM89AQ96GI7 184 aa18.19■□□□□ 0.5
CACNA1C-224ENST00000465934 ANKRD36CQ5JPF3 1778 aa18.19■□□□□ 0.5
CACNA1C-224ENST00000465934 DICER1Q9UPY3 1922 aaKnown RBP18.18■□□□□ 0.5
CACNA1C-224ENST00000465934 GOLGA2Q08379 1002 aa18.17■□□□□ 0.5
CACNA1C-224ENST00000465934 RIC3Q7Z5B4 369 aa18.17■□□□□ 0.5
CACNA1C-224ENST00000465934 DNAJC5GQ8N7S2 189 aa18.17■□□□□ 0.5
CACNA1C-224ENST00000465934 SALL2Q9Y467 1007 aaPredicted RBP18.17■□□□□ 0.5
CACNA1C-224ENST00000465934 ATP6V0A2Q9Y487 856 aa18.17■□□□□ 0.5
CACNA1C-224ENST00000465934 FZD9O00144 591 aa18.16■□□□□ 0.5
CACNA1C-224ENST00000465934 L3MBTL3Q96JM7 780 aaPredicted RBP18.16■□□□□ 0.5
CACNA1C-224ENST00000465934 CCDC30Q5VVM6 783 aa18.15■□□□□ 0.5
CACNA1C-224ENST00000465934 MYD88Q99836 296 aa18.15■□□□□ 0.5
CACNA1C-224ENST00000465934 TRIM28Q13263 835 aaKnown RBP18.14■□□□□ 0.49
CACNA1C-224ENST00000465934 GRAPQ13588 217 aa18.14■□□□□ 0.49
CACNA1C-224ENST00000465934 DDX46Q7L014 1031 aaKnown RBP18.14■□□□□ 0.49
CACNA1C-224ENST00000465934 LARGE2Q8N3Y3 721 aa18.14■□□□□ 0.49
CACNA1C-224ENST00000465934 GRAPLQ8TC17 118 aaPredicted RBP18.14■□□□□ 0.49
CACNA1C-224ENST00000465934 JDP2Q8WYK2 163 aa18.14■□□□□ 0.49
CACNA1C-224ENST00000465934 TAF1DQ9H5J8 278 aaPredicted RBP18.14■□□□□ 0.49
CACNA1C-224ENST00000465934 BBOX1O75936 387 aa18.13■□□□□ 0.49
CACNA1C-224ENST00000465934 AOC3Q16853 763 aa18.13■□□□□ 0.49
CACNA1C-224ENST00000465934 GRIPAP1Q4V328 841 aa18.13■□□□□ 0.49
CACNA1C-224ENST00000465934 COL4A1P02462 1669 aa18.12■□□□□ 0.49
CACNA1C-224ENST00000465934 LAMB2P55268 1798 aa18.12■□□□□ 0.49
CACNA1C-224ENST00000465934 IQCA1LA6NCM1 817 aa18.12■□□□□ 0.49
CACNA1C-224ENST00000465934 IRS4O14654 1257 aaPredicted RBP18.12■□□□□ 0.49
CACNA1C-224ENST00000465934 PPIP5K2O43314 1243 aa18.12■□□□□ 0.49
CACNA1C-224ENST00000465934 TWISTNBQ3B726 338 aaPredicted RBP18.12■□□□□ 0.49
CACNA1C-224ENST00000465934 SP8Q8IXZ3 490 aa18.12■□□□□ 0.49
CACNA1C-224ENST00000465934 JARID2Q92833 1246 aaPredicted RBP18.12■□□□□ 0.49
CACNA1C-224ENST00000465934 IL16Q14005 1332 aa18.12■□□□□ 0.49
CACNA1C-224ENST00000465934 SF3B3Q15393 1217 aaKnown RBP18.11■□□□□ 0.49
CACNA1C-224ENST00000465934 CHADLQ6NUI6 762 aa18.11■□□□□ 0.49
CACNA1C-224ENST00000465934 DPP8Q6V1X1 898 aaPredicted RBP18.11■□□□□ 0.49
CACNA1C-224ENST00000465934 G2E3Q7L622 706 aa18.11■□□□□ 0.49
CACNA1C-224ENST00000465934 GPC2Q8N158 579 aa18.11■□□□□ 0.49
CACNA1C-224ENST00000465934 CELF1Q92879 486 aaKnown RBP18.11■□□□□ 0.49
CACNA1C-224ENST00000465934 RTFDC1Q9BY42 306 aaPredicted RBP18.11■□□□□ 0.49
CACNA1C-224ENST00000465934 TMX4Q9H1E5 349 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms