RNA–Protein interactions for RNA: ENST00000465818.5

VPS8-218, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 572 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-218ENST00000465818 PUS10Q3MIT2 529 aaKnown RBP10.09□□□□□ -0.79
VPS8-218ENST00000465818 SLF2Q8IX21 1173 aa10.09□□□□□ -0.79
VPS8-218ENST00000465818 FAM9BQ8IZU0 186 aa10.09□□□□□ -0.79
VPS8-218ENST00000465818 USHBP1Q8N6Y0 703 aa10.09□□□□□ -0.79
VPS8-218ENST00000465818 PNISRQ8TF01 805 aaKnown RBP10.09□□□□□ -0.79
VPS8-218ENST00000465818 STRN4Q9NRL3 753 aa10.09□□□□□ -0.79
VPS8-218ENST00000465818 NUDCQ9Y266 331 aa10.09□□□□□ -0.79
VPS8-218ENST00000465818 KDRP35968 1356 aa10.09□□□□□ -0.79
VPS8-218ENST00000465818 BCL9LQ86UU0 1499 aa10.09□□□□□ -0.79
VPS8-218ENST00000465818 GLI3P10071 1580 aa10.09□□□□□ -0.79
VPS8-218ENST00000465818 MEGF6O75095 1541 aa10.08□□□□□ -0.8
VPS8-218ENST00000465818 U2AF1L5P0DN76 240 aaPredicted RBP10.08□□□□□ -0.8
VPS8-218ENST00000465818 U2AF1Q01081 240 aaKnown RBP eCLIP10.08□□□□□ -0.8
VPS8-218ENST00000465818 MORN1Q5T089 497 aa10.08□□□□□ -0.8
VPS8-218ENST00000465818 RGS22Q8NE09 1264 aa10.08□□□□□ -0.8
VPS8-218ENST00000465818 TFIP11Q9UBB9 837 aaKnown RBP10.08□□□□□ -0.8
VPS8-218ENST00000465818 THSD7AQ9UPZ6 1657 aa10.07□□□□□ -0.8
VPS8-218ENST00000465818 HMOX1P09601 288 aa10.07□□□□□ -0.8
VPS8-218ENST00000465818 LARP1Q6PKG0 1096 aaKnown RBP10.07□□□□□ -0.8
VPS8-218ENST00000465818 NGLY1Q96IV0 654 aa10.07□□□□□ -0.8
VPS8-218ENST00000465818 NLRP2Q9NX02 1062 aa10.07□□□□□ -0.8
VPS8-218ENST00000465818 SLC27A5Q9Y2P5 690 aa10.07□□□□□ -0.8
VPS8-218ENST00000465818 AFF2P51816 1311 aa10.07□□□□□ -0.8
VPS8-218ENST00000465818 LMOD1P29536 600 aaPredicted RBP10.06□□□□□ -0.8
VPS8-218ENST00000465818 GRIPAP1Q4V328 841 aa10.06□□□□□ -0.8
VPS8-218ENST00000465818 NBPF6Q5VWK0 638 aa10.06□□□□□ -0.8
VPS8-218ENST00000465818 SULT6B1Q6IMI4 303 aa10.06□□□□□ -0.8
VPS8-218ENST00000465818 NBPF4Q96M43 638 aa10.06□□□□□ -0.8
VPS8-218ENST00000465818 ADAMTS8Q9UP79 889 aa10.06□□□□□ -0.8
VPS8-218ENST00000465818 DISP2A7MBM2 1401 aa10.06□□□□□ -0.8
VPS8-218ENST00000465818 ATRNO75882 1429 aa10.06□□□□□ -0.8
VPS8-218ENST00000465818 PRKAR2BP31323 418 aa10.05□□□□□ -0.8
VPS8-218ENST00000465818 EVA1CP58658 441 aa10.05□□□□□ -0.8
VPS8-218ENST00000465818 RNF19BQ6ZMZ0 732 aa10.05□□□□□ -0.8
VPS8-218ENST00000465818 TBC1D9Q6ZT07 1266 aa10.05□□□□□ -0.8
VPS8-218ENST00000465818 TOM1L2Q6ZVM7 507 aa10.05□□□□□ -0.8
VPS8-218ENST00000465818 RETREG3Q86VR2 466 aa10.05□□□□□ -0.8
VPS8-218ENST00000465818 CCDC146Q8IYE0 955 aa10.05□□□□□ -0.8
VPS8-218ENST00000465818 ZFRQ96KR1 1074 aaKnown RBP10.05□□□□□ -0.8
VPS8-218ENST00000465818 OVOS2A0A0G2JMS6 1433 aa10.05□□□□□ -0.8
VPS8-218ENST00000465818 SCN11AQ9UI33 1791 aa10.04□□□□□ -0.8
VPS8-218ENST00000465818 TMEM88BA6NKF7 163 aa10.04□□□□□ -0.8
VPS8-218ENST00000465818 RNF40O75150 1001 aa10.04□□□□□ -0.8
VPS8-218ENST00000465818 BLOC1S3Q6QNY0 202 aa10.04□□□□□ -0.8
VPS8-218ENST00000465818 LAPTM4BQ86VI4 370 aa10.04□□□□□ -0.8
VPS8-218ENST00000465818 UNC5CLQ8IV45 518 aa10.04□□□□□ -0.8
VPS8-218ENST00000465818 CARD10Q9BWT7 1032 aa10.04□□□□□ -0.8
VPS8-218ENST00000465818 USP21Q9UK80 565 aa10.04□□□□□ -0.8
VPS8-218ENST00000465818 MAFBQ9Y5Q3 323 aaPredicted RBP10.04□□□□□ -0.8
VPS8-218ENST00000465818 BRWD3Q6RI45 1802 aa10.04□□□□□ -0.8
VPS8-218ENST00000465818 TOGARAM1Q9Y4F4 1720 aa10.04□□□□□ -0.8
VPS8-218ENST00000465818 ACTN4O43707 911 aaKnown RBP10.03□□□□□ -0.8
VPS8-218ENST00000465818 TNS2Q63HR2 1409 aa10.03□□□□□ -0.8
VPS8-218ENST00000465818 DOT1LQ8TEK3 1739 aa10.03□□□□□ -0.8
VPS8-218ENST00000465818 USP35Q9P2H5 1018 aa10.03□□□□□ -0.8
VPS8-218ENST00000465818 USTQ9Y2C2 406 aa10.03□□□□□ -0.8
VPS8-218ENST00000465818 SPATA31A1Q5TZJ5 1347 aa10.03□□□□□ -0.8
VPS8-218ENST00000465818 SPATA31A5Q5VU36 1347 aa10.03□□□□□ -0.8
VPS8-218ENST00000465818 SPATA31A7Q8IWB4 1347 aa10.03□□□□□ -0.8
VPS8-218ENST00000465818 MAPK8IP3Q9UPT6 1336 aa10.03□□□□□ -0.8
VPS8-218ENST00000465818 ADAMTS7Q9UKP4 1686 aa10.02□□□□□ -0.8
VPS8-218ENST00000465818 SENP3-EIF4A1A0A087X0R7 540 aa10.02□□□□□ -0.81
VPS8-218ENST00000465818 POTEB3A0JP26 581 aa10.02□□□□□ -0.81
VPS8-218ENST00000465818 VPS72Q15906 364 aa10.02□□□□□ -0.81
VPS8-218ENST00000465818 DESI1Q6ICB0 168 aa10.02□□□□□ -0.81
VPS8-218ENST00000465818 POTEBQ6S5H4 581 aa10.02□□□□□ -0.81
VPS8-218ENST00000465818 LYPD8Q6UX82 237 aa10.02□□□□□ -0.81
VPS8-218ENST00000465818 PLEKHF1Q96S99 279 aa10.02□□□□□ -0.81
VPS8-218ENST00000465818 MTMR7Q9Y216 660 aa10.02□□□□□ -0.81
VPS8-218ENST00000465818 PLEKHG2Q9H7P9 1386 aa10.01□□□□□ -0.81
VPS8-218ENST00000465818 SIPA1L3O60292 1781 aaPredicted RBP10.01□□□□□ -0.81
VPS8-218ENST00000465818 PIK3CDO00329 1044 aa10.01□□□□□ -0.81
VPS8-218ENST00000465818 RAPGEF4Q8WZA2 1011 aa10.01□□□□□ -0.81
VPS8-218ENST00000465818 RUNDC1Q96C34 613 aa10.01□□□□□ -0.81
VPS8-218ENST00000465818 EP400Q96L91 3159 aa10.01□□□□□ -0.81
VPS8-218ENST00000465818 ST18O60284 1047 aa10□□□□□ -0.81
VPS8-218ENST00000465818 BRD1O95696 1058 aa10□□□□□ -0.81
VPS8-218ENST00000465818 SOX11P35716 441 aa10□□□□□ -0.81
VPS8-218ENST00000465818 PBX2P40425 430 aa10□□□□□ -0.81
VPS8-218ENST00000465818 MFAP1P55081 439 aaKnown RBP10□□□□□ -0.81
VPS8-218ENST00000465818 TMCO4Q5TGY1 634 aa10□□□□□ -0.81
VPS8-218ENST00000465818 ZNF687Q8N1G0 1237 aa10□□□□□ -0.81
VPS8-218ENST00000465818 TCP11L2Q8N4U5 519 aa10□□□□□ -0.81
VPS8-218ENST00000465818 YTHDC1Q96MU7 727 aaKnown RBP10□□□□□ -0.81
VPS8-218ENST00000465818 ITGB4P16144 1822 aa10□□□□□ -0.81
VPS8-218ENST00000465818 APAF1O14727 1248 aa9.99□□□□□ -0.81
VPS8-218ENST00000465818 ATG7O95352 703 aa9.99□□□□□ -0.81
VPS8-218ENST00000465818 NEFMP07197 916 aa9.99□□□□□ -0.81
VPS8-218ENST00000465818 FBXO45P0C2W1 286 aa9.99□□□□□ -0.81
VPS8-218ENST00000465818 IL2RBP14784 551 aa9.99□□□□□ -0.81
VPS8-218ENST00000465818 TATP17735 454 aaPredicted RBP9.99□□□□□ -0.81
VPS8-218ENST00000465818 HNRNPUQ00839 825 aaKnown RBP eCLIP9.99□□□□□ -0.81
VPS8-218ENST00000465818 MARVELD3Q96A59 401 aa9.99□□□□□ -0.81
VPS8-218ENST00000465818 PHACTR3Q96KR7 559 aa9.99□□□□□ -0.81
VPS8-218ENST00000465818 PNNQ9H307 717 aaKnown RBP9.99□□□□□ -0.81
VPS8-218ENST00000465818 TRPC5Q9UL62 973 aaPredicted RBP9.99□□□□□ -0.81
VPS8-218ENST00000465818 RRP7AQ9Y3A4 280 aaKnown RBP9.99□□□□□ -0.81
VPS8-218ENST00000465818 MAP3K5Q99683 1374 aa9.99□□□□□ -0.81
VPS8-218ENST00000465818 KAT6BQ8WYB5 2073 aa9.98□□□□□ -0.81
VPS8-218ENST00000465818 F12P00748 615 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms