RNA–Protein interactions for RNA: ENST00000465780.1

RBBP4-209, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-209ENST00000465780 RIC1Q4ADV7 1423 aa13.68□□□□□ -0.22
RBBP4-209ENST00000465780 DDX58O95786 925 aaKnown RBP13.68□□□□□ -0.22
RBBP4-209ENST00000465780 KCNA3P22001 575 aa13.68□□□□□ -0.22
RBBP4-209ENST00000465780 PPP1R42Q7Z4L9 355 aa13.68□□□□□ -0.22
RBBP4-209ENST00000465780 TRMT2AQ8IZ69 625 aaKnown RBP13.68□□□□□ -0.22
RBBP4-209ENST00000465780 PHAXQ9H814 394 aaKnown RBP13.68□□□□□ -0.22
RBBP4-209ENST00000465780 PIM2Q9P1W9 311 aa13.68□□□□□ -0.22
RBBP4-209ENST00000465780 H0YIN7 160 aa13.67□□□□□ -0.22
RBBP4-209ENST00000465780 YBX3P16989 372 aaKnown RBP eCLIP13.67□□□□□ -0.22
RBBP4-209ENST00000465780 GPTP24298 496 aa13.67□□□□□ -0.22
RBBP4-209ENST00000465780 TRIM28Q13263 835 aaKnown RBP13.67□□□□□ -0.22
RBBP4-209ENST00000465780 KLRG2A4D1S0 409 aaPredicted RBP13.66□□□□□ -0.22
RBBP4-209ENST00000465780 NTSR2O95665 410 aa13.66□□□□□ -0.22
RBBP4-209ENST00000465780 GTF2E1P29083 439 aaPredicted RBP13.66□□□□□ -0.22
RBBP4-209ENST00000465780 SUSD4Q5VX71 490 aa13.66□□□□□ -0.22
RBBP4-209ENST00000465780 RIC3Q7Z5B4 369 aa13.66□□□□□ -0.22
RBBP4-209ENST00000465780 C2CD5Q86YS7 1000 aa13.66□□□□□ -0.22
RBBP4-209ENST00000465780 PELP1Q8IZL8 1130 aaKnown RBP13.66□□□□□ -0.22
RBBP4-209ENST00000465780 ZNF428Q96B54 188 aa13.66□□□□□ -0.22
RBBP4-209ENST00000465780 ISCA1Q9BUE6 129 aa13.66□□□□□ -0.22
RBBP4-209ENST00000465780 COL11A2P13942 1736 aaPredicted RBP13.65□□□□□ -0.22
RBBP4-209ENST00000465780 CT47B1P0C2W7 299 aaPredicted RBP13.65□□□□□ -0.22
RBBP4-209ENST00000465780 CHRNA5P30532 468 aa13.65□□□□□ -0.22
RBBP4-209ENST00000465780 DALRD3Q5D0E6 543 aaKnown RBP13.65□□□□□ -0.22
RBBP4-209ENST00000465780 KSR2Q6VAB6 950 aa13.65□□□□□ -0.22
RBBP4-209ENST00000465780 NLRP10Q86W26 655 aa13.65□□□□□ -0.22
RBBP4-209ENST00000465780 UTP14AQ9BVJ6 771 aaKnown RBP13.65□□□□□ -0.22
RBBP4-209ENST00000465780 FAM177BA6PVY3 158 aa13.64□□□□□ -0.23
RBBP4-209ENST00000465780 SRGNP10124 158 aa13.64□□□□□ -0.23
RBBP4-209ENST00000465780 SLC10A5Q5PT55 438 aa13.64□□□□□ -0.23
RBBP4-209ENST00000465780 STYK1Q6J9G0 422 aa13.64□□□□□ -0.23
RBBP4-209ENST00000465780 CCDC24Q8N4L8 307 aa13.64□□□□□ -0.23
RBBP4-209ENST00000465780 CDCA7LQ96GN5 454 aa13.64□□□□□ -0.23
RBBP4-209ENST00000465780 ABCC12Q96J65 1359 aa13.63□□□□□ -0.23
RBBP4-209ENST00000465780 TCERG1O14776 1098 aaKnown RBP13.63□□□□□ -0.23
RBBP4-209ENST00000465780 HNRNPUQ00839 825 aaKnown RBP eCLIP13.63□□□□□ -0.23
RBBP4-209ENST00000465780 FLIIQ13045 1269 aa13.63□□□□□ -0.23
RBBP4-209ENST00000465780 NUTM1Q86Y26 1132 aa13.63□□□□□ -0.23
RBBP4-209ENST00000465780 TTLL6Q8N841 843 aa13.63□□□□□ -0.23
RBBP4-209ENST00000465780 MASTLQ96GX5 879 aa13.63□□□□□ -0.23
RBBP4-209ENST00000465780 METTL22Q9BUU2 404 aaPredicted RBP13.63□□□□□ -0.23
RBBP4-209ENST00000465780 BCS1LQ9Y276 419 aa13.63□□□□□ -0.23
RBBP4-209ENST00000465780 ZBTB12Q9Y330 459 aaPredicted RBP13.63□□□□□ -0.23
RBBP4-209ENST00000465780 ADCY9O60503 1353 aa13.62□□□□□ -0.23
RBBP4-209ENST00000465780 PI4KAP2A4QPH2 592 aa13.62□□□□□ -0.23
RBBP4-209ENST00000465780 NPR1P16066 1061 aa13.62□□□□□ -0.23
RBBP4-209ENST00000465780 CRY2Q49AN0 593 aa13.62□□□□□ -0.23
RBBP4-209ENST00000465780 ERFEQ4G0M1 354 aa13.62□□□□□ -0.23
RBBP4-209ENST00000465780 G2E3Q7L622 706 aa13.62□□□□□ -0.23
RBBP4-209ENST00000465780 PI4KAP1Q8N8J0 262 aa13.62□□□□□ -0.23
RBBP4-209ENST00000465780 CNKSR1Q969H4 720 aa13.62□□□□□ -0.23
RBBP4-209ENST00000465780 TRMT112Q9UI30 125 aaKnown RBP13.62□□□□□ -0.23
RBBP4-209ENST00000465780 MAP3K2Q9Y2U5 619 aa13.62□□□□□ -0.23
RBBP4-209ENST00000465780 SH3TC1Q8TE82 1336 aa13.62□□□□□ -0.23
RBBP4-209ENST00000465780 TNRC6CQ9HCJ0 1690 aaKnown RBP13.61□□□□□ -0.23
RBBP4-209ENST00000465780 ATP5J2-PTCD1G3V325 749 aa13.61□□□□□ -0.23
RBBP4-209ENST00000465780 NEXNQ0ZGT2 675 aa13.61□□□□□ -0.23
RBBP4-209ENST00000465780 CCDC191Q8NCU4 936 aa13.61□□□□□ -0.23
RBBP4-209ENST00000465780 ZNF622Q969S3 477 aaKnown RBP eCLIP13.61□□□□□ -0.233e-23■□□□□ 8.3
RBBP4-209ENST00000465780 MYD88Q99836 296 aa13.61□□□□□ -0.23
RBBP4-209ENST00000465780 WWC3Q9ULE0 1092 aa13.61□□□□□ -0.23
RBBP4-209ENST00000465780 ZBED9Q6R2W3 1325 aa13.61□□□□□ -0.23
RBBP4-209ENST00000465780 SLX4Q8IY92 1834 aa13.6□□□□□ -0.23
RBBP4-209ENST00000465780 HSP90B1P14625 803 aaKnown RBP13.6□□□□□ -0.23
RBBP4-209ENST00000465780 FKBP5Q13451 457 aaPredicted RBP13.6□□□□□ -0.23
RBBP4-209ENST00000465780 CACNA1SQ13698 1873 aa13.6□□□□□ -0.23
RBBP4-209ENST00000465780 ALDH1L2Q3SY69 923 aa13.6□□□□□ -0.23
RBBP4-209ENST00000465780 NLRP3Q96P20 1036 aa13.6□□□□□ -0.23
RBBP4-209ENST00000465780 LAMB2P55268 1798 aa13.59□□□□□ -0.23
RBBP4-209ENST00000465780 ALDH1B1P30837 517 aa13.59□□□□□ -0.23
RBBP4-209ENST00000465780 HOXA10P31260 410 aaPredicted RBP13.59□□□□□ -0.23
RBBP4-209ENST00000465780 ZBTB38Q8NAP3 1195 aaPredicted RBP13.59□□□□□ -0.23
RBBP4-209ENST00000465780 DNAAF4Q8WXU2 420 aa13.59□□□□□ -0.23
RBBP4-209ENST00000465780 CWC25Q9NXE8 425 aaPredicted RBP13.59□□□□□ -0.23
RBBP4-209ENST00000465780 DDX60Q8IY21 1712 aaKnown RBP13.59□□□□□ -0.23
RBBP4-209ENST00000465780 PCCAP05165 728 aaPredicted RBP13.58□□□□□ -0.24
RBBP4-209ENST00000465780 IGKV5-2P06315 115 aa13.58□□□□□ -0.24
RBBP4-209ENST00000465780 MRPL50Q8N5N7 158 aaKnown RBP13.58□□□□□ -0.24
RBBP4-209ENST00000465780 SBF1O95248 1867 aa13.57□□□□□ -0.24
RBBP4-209ENST00000465780 NEURL1BA8MQ27 555 aa13.57□□□□□ -0.24
RBBP4-209ENST00000465780 BRPF1P55201 1214 aaPredicted RBP13.57□□□□□ -0.24
RBBP4-209ENST00000465780 SOGA3Q5TF21 947 aa13.57□□□□□ -0.24
RBBP4-209ENST00000465780 PRPF40BQ6NWY9 871 aaKnown RBP13.57□□□□□ -0.24
RBBP4-209ENST00000465780 LINS1Q8NG48 757 aa13.57□□□□□ -0.24
RBBP4-209ENST00000465780 SSH1Q8WYL5 1049 aa13.57□□□□□ -0.24
RBBP4-209ENST00000465780 RPGRQ92834 1020 aaKnown RBP13.57□□□□□ -0.24
RBBP4-209ENST00000465780 FAM89AQ96GI7 184 aa13.57□□□□□ -0.24
RBBP4-209ENST00000465780 RBM17Q96I25 401 aaKnown RBP13.57□□□□□ -0.24
RBBP4-209ENST00000465780 CRAMP1Q96RY5 1269 aa13.57□□□□□ -0.24
RBBP4-209ENST00000465780 SSUH2Q9Y2M2 353 aa13.57□□□□□ -0.24
RBBP4-209ENST00000465780 PTPRCP08575 1304 aa13.57□□□□□ -0.24
RBBP4-209ENST00000465780 FER1L6Q2WGJ9 1857 aa13.57□□□□□ -0.24
RBBP4-209ENST00000465780 HCLS1P14317 486 aaPredicted RBP13.56□□□□□ -0.24
RBBP4-209ENST00000465780 YY1P25490 414 aa13.56□□□□□ -0.24
RBBP4-209ENST00000465780 ARHGAP27Q6ZUM4 889 aa13.56□□□□□ -0.24
RBBP4-209ENST00000465780 SYNE4Q8N205 404 aa13.56□□□□□ -0.24
RBBP4-209ENST00000465780 CDHR2Q9BYE9 1310 aa13.56□□□□□ -0.24
RBBP4-209ENST00000465780 MYH3P11055 1940 aa13.56□□□□□ -0.24
RBBP4-209ENST00000465780 IRS4O14654 1257 aaPredicted RBP13.55□□□□□ -0.24
RBBP4-209ENST00000465780 SF3B3Q15393 1217 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms