RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 EPS15P42566 896 aa13.73□□□□□ -0.21
GPNMB-206ENST00000465673 CRY2Q49AN0 593 aa13.73□□□□□ -0.21
GPNMB-206ENST00000465673 SUSD4Q5VX71 490 aa13.73□□□□□ -0.21
GPNMB-206ENST00000465673 PNMA8AQ86V59 439 aaPredicted RBP13.73□□□□□ -0.21
GPNMB-206ENST00000465673 JDP2Q8WYK2 163 aa13.73□□□□□ -0.21
GPNMB-206ENST00000465673 ZBTB3Q9H5J0 574 aa13.73□□□□□ -0.21
GPNMB-206ENST00000465673 ABT1Q9ULW3 272 aaKnown RBP13.73□□□□□ -0.21
GPNMB-206ENST00000465673 LTBP1Q14766 1721 aa13.73□□□□□ -0.21
GPNMB-206ENST00000465673 MAP3K15Q6ZN16 1313 aa13.72□□□□□ -0.21
GPNMB-206ENST00000465673 RGL2O15211 777 aa13.72□□□□□ -0.21
GPNMB-206ENST00000465673 HTATSF1O43719 755 aaKnown RBP13.72□□□□□ -0.21
GPNMB-206ENST00000465673 HSPA8P11142 646 aaKnown RBP13.72□□□□□ -0.21
GPNMB-206ENST00000465673 PSMD1Q99460 953 aa13.72□□□□□ -0.21
GPNMB-206ENST00000465673 WDR33Q9C0J8 1336 aaKnown RBP13.71□□□□□ -0.21
GPNMB-206ENST00000465673 TRAF5O00463 557 aa13.71□□□□□ -0.21
GPNMB-206ENST00000465673 SCNN1DP51172 638 aa13.71□□□□□ -0.21
GPNMB-206ENST00000465673 EIF6P56537 245 aaKnown RBP13.71□□□□□ -0.21
GPNMB-206ENST00000465673 GRM1Q13255 1194 aa13.71□□□□□ -0.21
GPNMB-206ENST00000465673 RPGRQ92834 1020 aaKnown RBP13.71□□□□□ -0.21
GPNMB-206ENST00000465673 DDX21Q9NR30 783 aaKnown RBP eCLIP13.71□□□□□ -0.21
GPNMB-206ENST00000465673 ERVV-1B6SEH8 477 aa13.7□□□□□ -0.22
GPNMB-206ENST00000465673 HOXA10P31260 410 aaPredicted RBP13.7□□□□□ -0.22
GPNMB-206ENST00000465673 EIF4A1P60842 406 aaKnown RBP13.7□□□□□ -0.22
GPNMB-206ENST00000465673 LARGE2Q8N3Y3 721 aa13.7□□□□□ -0.22
GPNMB-206ENST00000465673 NYXQ9GZU5 481 aa13.7□□□□□ -0.22
GPNMB-206ENST00000465673 CST9Q5W186 159 aa13.69□□□□□ -0.22
GPNMB-206ENST00000465673 CYP4F22Q6NT55 531 aa13.69□□□□□ -0.22
GPNMB-206ENST00000465673 KIF6Q6ZMV9 814 aa13.69□□□□□ -0.22
GPNMB-206ENST00000465673 NUP98P52948 1817 aa13.69□□□□□ -0.22
GPNMB-206ENST00000465673 PPEF1O14829 653 aaPredicted RBP13.68□□□□□ -0.22
GPNMB-206ENST00000465673 NTSR2O95665 410 aa13.68□□□□□ -0.22
GPNMB-206ENST00000465673 LMOD1P29536 600 aaPredicted RBP13.68□□□□□ -0.22
GPNMB-206ENST00000465673 CC2D2BQ6DHV5 1058 aa13.68□□□□□ -0.22
GPNMB-206ENST00000465673 PAXIP1Q6ZW49 1069 aaPredicted RBP13.68□□□□□ -0.22
GPNMB-206ENST00000465673 ZNF34Q8IZ26 560 aa13.68□□□□□ -0.22
GPNMB-206ENST00000465673 ABHD8Q96I13 439 aa13.68□□□□□ -0.22
GPNMB-206ENST00000465673 LAMB4A4D0S4 1761 aa13.68□□□□□ -0.22
GPNMB-206ENST00000465673 ANXA1P04083 346 aa13.67□□□□□ -0.22
GPNMB-206ENST00000465673 AOC3Q16853 763 aa13.67□□□□□ -0.22
GPNMB-206ENST00000465673 ZNF428Q96B54 188 aa13.67□□□□□ -0.22
GPNMB-206ENST00000465673 RBM17Q96I25 401 aaKnown RBP13.67□□□□□ -0.22
GPNMB-206ENST00000465673 CAPNS2Q96L46 248 aa13.67□□□□□ -0.22
GPNMB-206ENST00000465673 CRAMP1Q96RY5 1269 aa13.67□□□□□ -0.22
GPNMB-206ENST00000465673 PLEKHF1Q96S99 279 aa13.67□□□□□ -0.22
GPNMB-206ENST00000465673 TSKSQ9UJT2 592 aa13.67□□□□□ -0.22
GPNMB-206ENST00000465673 KDM3BQ7LBC6 1761 aa13.66□□□□□ -0.22
GPNMB-206ENST00000465673 PPIP5K2O43314 1243 aa13.66□□□□□ -0.22
GPNMB-206ENST00000465673 AOC2O75106 756 aa13.66□□□□□ -0.22
GPNMB-206ENST00000465673 MAP2K1Q02750 393 aaPredicted RBP13.66□□□□□ -0.22
GPNMB-206ENST00000465673 PROSER3Q2NL68 480 aa13.66□□□□□ -0.22
GPNMB-206ENST00000465673 NIM1KQ8IY84 436 aa13.66□□□□□ -0.22
GPNMB-206ENST00000465673 PNISRQ8TF01 805 aaKnown RBP13.66□□□□□ -0.22
GPNMB-206ENST00000465673 DLG5Q8TDM6 1919 aa13.66□□□□□ -0.22
GPNMB-206ENST00000465673 RIC1Q4ADV7 1423 aa13.65□□□□□ -0.22
GPNMB-206ENST00000465673 EIF2S2P20042 333 aaKnown RBP13.65□□□□□ -0.22
GPNMB-206ENST00000465673 CXCL9Q07325 125 aa13.65□□□□□ -0.22
GPNMB-206ENST00000465673 NFE2L2Q16236 605 aa13.65□□□□□ -0.22
GPNMB-206ENST00000465673 GIGYF2Q6Y7W6 1299 aaKnown RBP13.65□□□□□ -0.22
GPNMB-206ENST00000465673 LRP10Q7Z4F1 713 aa13.65□□□□□ -0.22
GPNMB-206ENST00000465673 GPR101Q96P66 508 aaPredicted RBP13.65□□□□□ -0.22
GPNMB-206ENST00000465673 IBTKQ9P2D0 1353 aaPredicted RBP13.64□□□□□ -0.23
GPNMB-206ENST00000465673 PDIA6Q15084 440 aa13.64□□□□□ -0.23
GPNMB-206ENST00000465673 USP50Q70EL3 339 aaPredicted RBP13.64□□□□□ -0.23
GPNMB-206ENST00000465673 NLRP3Q96P20 1036 aa13.64□□□□□ -0.23
GPNMB-206ENST00000465673 GPRC5DQ9NZD1 345 aa13.64□□□□□ -0.23
GPNMB-206ENST00000465673 ATP6V0A2Q9Y487 856 aa13.64□□□□□ -0.23
GPNMB-206ENST00000465673 ABCC4O15439 1325 aa13.64□□□□□ -0.23
GPNMB-206ENST00000465673 SHTN1A0MZ66 631 aa13.63□□□□□ -0.23
GPNMB-206ENST00000465673 HCLS1P14317 486 aaPredicted RBP13.63□□□□□ -0.23
GPNMB-206ENST00000465673 GMPSP49915 693 aaPredicted RBP13.63□□□□□ -0.23
GPNMB-206ENST00000465673 FAM161AQ3B820 660 aa13.63□□□□□ -0.23
GPNMB-206ENST00000465673 NECTIN2Q92692 538 aa13.63□□□□□ -0.23
GPNMB-206ENST00000465673 GLIS2Q9BZE0 524 aaPredicted RBP13.63□□□□□ -0.23
GPNMB-206ENST00000465673 TLL2Q9Y6L7 1015 aa13.63□□□□□ -0.23
GPNMB-206ENST00000465673 CCDC85CA6NKD9 419 aa13.62□□□□□ -0.23
GPNMB-206ENST00000465673 RAD17O75943 681 aa13.62□□□□□ -0.23
GPNMB-206ENST00000465673 NEFMP07197 916 aa13.62□□□□□ -0.23
GPNMB-206ENST00000465673 HIRAP54198 1017 aaPredicted RBP13.62□□□□□ -0.23
GPNMB-206ENST00000465673 SLC10A5Q5PT55 438 aa13.62□□□□□ -0.23
GPNMB-206ENST00000465673 DLK2Q6UY11 383 aa13.62□□□□□ -0.23
GPNMB-206ENST00000465673 PPP1R42Q7Z4L9 355 aa13.62□□□□□ -0.23
GPNMB-206ENST00000465673 UTP14AQ9BVJ6 771 aaKnown RBP13.62□□□□□ -0.23
GPNMB-206ENST00000465673 ADARB2Q9NS39 739 aaKnown RBP13.62□□□□□ -0.23
GPNMB-206ENST00000465673 TSPYL4Q9UJ04 414 aa13.62□□□□□ -0.23
GPNMB-206ENST00000465673 ZNRF3Q9ULT6 936 aa13.62□□□□□ -0.23
GPNMB-206ENST00000465673 CELF2O95319 508 aaKnown RBP13.61□□□□□ -0.23
GPNMB-206ENST00000465673 ECE1P42892 770 aa13.61□□□□□ -0.23
GPNMB-206ENST00000465673 AIMP1Q12904 312 aaKnown RBP13.61□□□□□ -0.23
GPNMB-206ENST00000465673 GRIPAP1Q4V328 841 aa13.61□□□□□ -0.23
GPNMB-206ENST00000465673 ZNF408Q9H9D4 720 aa13.61□□□□□ -0.23
GPNMB-206ENST00000465673 PARP10Q53GL7 1025 aa13.6□□□□□ -0.23
GPNMB-206ENST00000465673 DPP8Q6V1X1 898 aaPredicted RBP13.6□□□□□ -0.23
GPNMB-206ENST00000465673 SAPCD2Q86UD0 394 aa13.6□□□□□ -0.23
GPNMB-206ENST00000465673 TRPM4Q8TD43 1214 aa13.6□□□□□ -0.23
GPNMB-206ENST00000465673 BEGAINQ9BUH8 593 aa13.6□□□□□ -0.23
GPNMB-206ENST00000465673 RTFDC1Q9BY42 306 aaPredicted RBP13.6□□□□□ -0.23
GPNMB-206ENST00000465673 THSD7BQ9C0I4 1608 aa13.6□□□□□ -0.23
GPNMB-206ENST00000465673 YDJCA8MPS7 323 aa13.59□□□□□ -0.23
GPNMB-206ENST00000465673 KRT24Q2M2I5 525 aa13.59□□□□□ -0.23
GPNMB-206ENST00000465673 CIAPIN1Q6FI81 312 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms