RNA–Protein interactions for RNA: ENST00000465405.1

GABRE-205, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-205ENST00000465405 XAGE3Q8WTP9 111 aa11.46□□□□□ -0.57
GABRE-205ENST00000465405 NYXQ9GZU5 481 aa11.46□□□□□ -0.57
GABRE-205ENST00000465405 DDX21Q9NR30 783 aaKnown RBP eCLIP11.46□□□□□ -0.57
GABRE-205ENST00000465405 TIAM2Q8IVF5 1701 aa11.46□□□□□ -0.58
GABRE-205ENST00000465405 ANP32CO43423 234 aa11.45□□□□□ -0.58
GABRE-205ENST00000465405 NTSR2O95665 410 aa11.45□□□□□ -0.58
GABRE-205ENST00000465405 HDGFL1Q5TGJ6 251 aa11.45□□□□□ -0.58
GABRE-205ENST00000465405 DUSP27Q5VZP5 1158 aa11.45□□□□□ -0.58
GABRE-205ENST00000465405 OLFM4Q6UX06 510 aa11.45□□□□□ -0.58
GABRE-205ENST00000465405 REM2Q8IYK8 340 aaPredicted RBP11.45□□□□□ -0.58
GABRE-205ENST00000465405 C7orf43Q8WVR3 580 aa11.45□□□□□ -0.58
GABRE-205ENST00000465405 MRS2Q9HD23 443 aa11.45□□□□□ -0.58
GABRE-205ENST00000465405 ANKRD36CQ5JPF3 1778 aa11.45□□□□□ -0.58
GABRE-205ENST00000465405 IBTKQ9P2D0 1353 aaPredicted RBP11.44□□□□□ -0.58
GABRE-205ENST00000465405 ELL2O00472 640 aaPredicted RBP11.44□□□□□ -0.58
GABRE-205ENST00000465405 HOXB7P09629 217 aa11.44□□□□□ -0.58
GABRE-205ENST00000465405 GNAI1P63096 354 aa11.44□□□□□ -0.58
GABRE-205ENST00000465405 POLA2Q14181 598 aa11.44□□□□□ -0.58
GABRE-205ENST00000465405 C3orf67Q6ZVT6 689 aa11.44□□□□□ -0.58
GABRE-205ENST00000465405 ZNF428Q96B54 188 aa11.44□□□□□ -0.58
GABRE-205ENST00000465405 RRAGCQ9HB90 399 aa11.44□□□□□ -0.58
GABRE-205ENST00000465405 IFT57Q9NWB7 429 aa11.44□□□□□ -0.58
GABRE-205ENST00000465405 KDM2BQ8NHM5 1336 aa11.43□□□□□ -0.58
GABRE-205ENST00000465405 FXR2P51116 673 aaKnown RBP eCLIP11.43□□□□□ -0.58
GABRE-205ENST00000465405 CRY2Q49AN0 593 aa11.43□□□□□ -0.58
GABRE-205ENST00000465405 PARP10Q53GL7 1025 aa11.43□□□□□ -0.58
GABRE-205ENST00000465405 PPP1R42Q7Z4L9 355 aa11.43□□□□□ -0.58
GABRE-205ENST00000465405 SLC51AQ86UW1 340 aa11.43□□□□□ -0.58
GABRE-205ENST00000465405 C8orf58Q8NAV2 365 aa11.43□□□□□ -0.58
GABRE-205ENST00000465405 TAOK3Q9H2K8 898 aa11.43□□□□□ -0.58
GABRE-205ENST00000465405 DBF4Q9UBU7 674 aaPredicted RBP11.43□□□□□ -0.58
GABRE-205ENST00000465405 RIC1Q4ADV7 1423 aa11.43□□□□□ -0.58
GABRE-205ENST00000465405 DICER1Q9UPY3 1922 aaKnown RBP11.43□□□□□ -0.58
GABRE-205ENST00000465405 LTBP3Q9NS15 1303 aa11.42□□□□□ -0.58
GABRE-205ENST00000465405 ZC3H4Q9UPT8 1303 aaKnown RBP11.42□□□□□ -0.58
GABRE-205ENST00000465405 GLTPD2A6NH11 291 aa11.42□□□□□ -0.58
GABRE-205ENST00000465405 TOMM70O94826 608 aa11.42□□□□□ -0.58
GABRE-205ENST00000465405 ALDH1B1P30837 517 aa11.42□□□□□ -0.58
GABRE-205ENST00000465405 CALD1Q05682 793 aaKnown RBP11.42□□□□□ -0.58
GABRE-205ENST00000465405 TCIRG1Q13488 830 aa11.42□□□□□ -0.58
GABRE-205ENST00000465405 CCDC93Q567U6 631 aa11.42□□□□□ -0.58
GABRE-205ENST00000465405 NLRP10Q86W26 655 aa11.42□□□□□ -0.58
GABRE-205ENST00000465405 SYNE4Q8N205 404 aa11.42□□□□□ -0.58
GABRE-205ENST00000465405 UTP14AQ9BVJ6 771 aaKnown RBP11.42□□□□□ -0.58
GABRE-205ENST00000465405 HSP90AB3PQ58FF7 597 aa11.41□□□□□ -0.58
GABRE-205ENST00000465405 SOGA3Q5TF21 947 aa11.41□□□□□ -0.58
GABRE-205ENST00000465405 ANKRD13DQ6ZTN6 518 aa11.41□□□□□ -0.58
GABRE-205ENST00000465405 WWC1Q8IX03 1113 aa11.41□□□□□ -0.58
GABRE-205ENST00000465405 TSPYL6Q8N831 410 aa11.41□□□□□ -0.58
GABRE-205ENST00000465405 PLBD2Q8NHP8 589 aa11.41□□□□□ -0.58
GABRE-205ENST00000465405 RPGRQ92834 1020 aaKnown RBP11.41□□□□□ -0.58
GABRE-205ENST00000465405 TSR2Q969E8 191 aaKnown RBP11.41□□□□□ -0.58
GABRE-205ENST00000465405 PHAXQ9H814 394 aaKnown RBP11.41□□□□□ -0.58
GABRE-205ENST00000465405 HCLS1P14317 486 aaPredicted RBP11.4□□□□□ -0.58
GABRE-205ENST00000465405 HSPA6P17066 643 aa11.4□□□□□ -0.58
GABRE-205ENST00000465405 HOXA10P31260 410 aaPredicted RBP11.4□□□□□ -0.58
GABRE-205ENST00000465405 FKBP4Q02790 459 aaKnown RBP eCLIP11.4□□□□□ -0.58
GABRE-205ENST00000465405 CCDC27Q2M243 656 aa11.4□□□□□ -0.58
GABRE-205ENST00000465405 SLC10A5Q5PT55 438 aa11.4□□□□□ -0.58
GABRE-205ENST00000465405 NLRP3Q96P20 1036 aa11.4□□□□□ -0.58
GABRE-205ENST00000465405 ZNF277Q9NRM2 450 aaPredicted RBP11.4□□□□□ -0.58
GABRE-205ENST00000465405 HYPKQ9NX55 129 aa11.4□□□□□ -0.58
GABRE-205ENST00000465405 SALL2Q9Y467 1007 aaPredicted RBP11.4□□□□□ -0.58
GABRE-205ENST00000465405 LAMB2P55268 1798 aa11.4□□□□□ -0.58
GABRE-205ENST00000465405 SNED1Q8TER0 1413 aa11.4□□□□□ -0.58
GABRE-205ENST00000465405 POTECB2RU33 542 aa11.39□□□□□ -0.59
GABRE-205ENST00000465405 ATP5J2-PTCD1G3V325 749 aa11.39□□□□□ -0.59
GABRE-205ENST00000465405 TCERG1O14776 1098 aaKnown RBP11.39□□□□□ -0.59
GABRE-205ENST00000465405 C16orf71Q8IYS4 520 aaPredicted RBP11.39□□□□□ -0.59
GABRE-205ENST00000465405 CRAMP1Q96RY5 1269 aa11.39□□□□□ -0.59
GABRE-205ENST00000465405 TRMT112Q9UI30 125 aaKnown RBP11.39□□□□□ -0.59
GABRE-205ENST00000465405 DDNO94850 711 aaPredicted RBP11.38□□□□□ -0.59
GABRE-205ENST00000465405 DPY19L2Q6NUT2 758 aa11.38□□□□□ -0.59
GABRE-205ENST00000465405 RTKN2Q8IZC4 609 aa11.38□□□□□ -0.59
GABRE-205ENST00000465405 RBM46Q8TBY0 533 aaKnown RBP11.38□□□□□ -0.59
GABRE-205ENST00000465405 RBM17Q96I25 401 aaKnown RBP11.38□□□□□ -0.59
GABRE-205ENST00000465405 ISCA1Q9BUE6 129 aa11.38□□□□□ -0.59
GABRE-205ENST00000465405 DDX60Q8IY21 1712 aaKnown RBP11.38□□□□□ -0.59
GABRE-205ENST00000465405 WDR90Q96KV7 1748 aa11.38□□□□□ -0.59
GABRE-205ENST00000465405 RNF123Q5XPI4 1314 aa11.37□□□□□ -0.59
GABRE-205ENST00000465405 SH3TC1Q8TE82 1336 aa11.37□□□□□ -0.59
GABRE-205ENST00000465405 PPEF1O14829 653 aaPredicted RBP11.37□□□□□ -0.59
GABRE-205ENST00000465405 VEGFAP15692 232 aaPredicted RBP11.37□□□□□ -0.59
GABRE-205ENST00000465405 RTL5Q5HYW3 569 aaPredicted RBP11.37□□□□□ -0.59
GABRE-205ENST00000465405 RIC3Q7Z5B4 369 aa11.37□□□□□ -0.59
GABRE-205ENST00000465405 FAM9BQ8IZU0 186 aa11.37□□□□□ -0.59
GABRE-205ENST00000465405 FAM89AQ96GI7 184 aa11.37□□□□□ -0.59
GABRE-205ENST00000465405 TAF1P21675 1872 aa11.37□□□□□ -0.59
GABRE-205ENST00000465405 COL4A5P29400 1685 aa11.36□□□□□ -0.59
GABRE-205ENST00000465405 ABCC4O15439 1325 aa11.36□□□□□ -0.59
GABRE-205ENST00000465405 PITPNM1O00562 1244 aa11.36□□□□□ -0.59
GABRE-205ENST00000465405 IARSP41252 1262 aaKnown RBP11.36□□□□□ -0.59
GABRE-205ENST00000465405 CCDC30Q5VVM6 783 aa11.36□□□□□ -0.59
GABRE-205ENST00000465405 IL16Q14005 1332 aa11.35□□□□□ -0.59
GABRE-205ENST00000465405 ZNF541Q9H0D2 1346 aa11.35□□□□□ -0.59
GABRE-205ENST00000465405 GOLGA2Q08379 1002 aa11.35□□□□□ -0.59
GABRE-205ENST00000465405 TWISTNBQ3B726 338 aaPredicted RBP11.35□□□□□ -0.59
GABRE-205ENST00000465405 CC2D2BQ6DHV5 1058 aa11.35□□□□□ -0.59
GABRE-205ENST00000465405 PSMD1Q99460 953 aa11.35□□□□□ -0.59
GABRE-205ENST00000465405 MYD88Q99836 296 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms