RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 BCL2L13Q9BXK5 485 aa21.55■■□□□ 1.04
USP39-211ENST00000465282 CWC25Q9NXE8 425 aaPredicted RBP21.55■■□□□ 1.04
USP39-211ENST00000465282 TRMT112Q9UI30 125 aaKnown RBP21.55■■□□□ 1.04
USP39-211ENST00000465282 N4BP2Q86UW6 1770 aaPredicted RBP21.55■■□□□ 1.04
USP39-211ENST00000465282 DLEC1Q9Y238 1755 aa21.54■■□□□ 1.04
USP39-211ENST00000465282 HSP90B1P14625 803 aaKnown RBP21.54■■□□□ 1.04
USP39-211ENST00000465282 SLC10A5Q5PT55 438 aa21.54■■□□□ 1.04
USP39-211ENST00000465282 LINS1Q8NG48 757 aa21.54■■□□□ 1.04
USP39-211ENST00000465282 ARHGAP45Q92619 1136 aa21.54■■□□□ 1.04
USP39-211ENST00000465282 YTHDC1Q96MU7 727 aaKnown RBP21.54■■□□□ 1.04
USP39-211ENST00000465282 BRCA1P38398 1863 aaKnown RBP21.54■■□□□ 1.04
USP39-211ENST00000465282 SH3TC1Q8TE82 1336 aa21.54■■□□□ 1.04
USP39-211ENST00000465282 PXDNLA1KZ92 1463 aa21.53■■□□□ 1.04
USP39-211ENST00000465282 H0YIN7 160 aa21.53■■□□□ 1.04
USP39-211ENST00000465282 IPO8O15397 1037 aaKnown RBP21.53■■□□□ 1.04
USP39-211ENST00000465282 NLGN2Q8NFZ4 835 aa21.53■■□□□ 1.04
USP39-211ENST00000465282 KLRG2A4D1S0 409 aaPredicted RBP21.52■■□□□ 1.04
USP39-211ENST00000465282 NEURL1BA8MQ27 555 aa21.52■■□□□ 1.04
USP39-211ENST00000465282 IGKV5-2P06315 115 aa21.52■■□□□ 1.04
USP39-211ENST00000465282 ERFEQ4G0M1 354 aa21.52■■□□□ 1.04
USP39-211ENST00000465282 ZBTB38Q8NAP3 1195 aaPredicted RBP21.52■■□□□ 1.04
USP39-211ENST00000465282 F6X3S4 739 aa21.51■■□□□ 1.03
USP39-211ENST00000465282 NUTM1Q86Y26 1132 aa21.51■■□□□ 1.03
USP39-211ENST00000465282 API5Q9BZZ5 524 aaKnown RBP21.51■■□□□ 1.03
USP39-211ENST00000465282 NOB1Q9ULX3 412 aaKnown RBP21.51■■□□□ 1.03
USP39-211ENST00000465282 A0A0G2JLW4 131 aa21.5■■□□□ 1.03
USP39-211ENST00000465282 PCCAP05165 728 aaPredicted RBP21.5■■□□□ 1.03
USP39-211ENST00000465282 DPEP1P16444 411 aa21.5■■□□□ 1.03
USP39-211ENST00000465282 BEND3Q5T5X7 828 aa21.5■■□□□ 1.03
USP39-211ENST00000465282 LAMB2P55268 1798 aa21.5■■□□□ 1.03
USP39-211ENST00000465282 DCAF8L1A6NGE4 600 aa21.49■■□□□ 1.03
USP39-211ENST00000465282 ALDH1L1O75891 902 aa21.49■■□□□ 1.03
USP39-211ENST00000465282 KCNA3P22001 575 aa21.49■■□□□ 1.03
USP39-211ENST00000465282 C2CD5Q86YS7 1000 aa21.49■■□□□ 1.03
USP39-211ENST00000465282 CCDC24Q8N4L8 307 aa21.49■■□□□ 1.03
USP39-211ENST00000465282 NLRP3Q96P20 1036 aa21.49■■□□□ 1.03
USP39-211ENST00000465282 PIM2Q9P1W9 311 aa21.49■■□□□ 1.03
USP39-211ENST00000465282 ABCC12Q96J65 1359 aa21.48■■□□□ 1.03
USP39-211ENST00000465282 BCAR3O75815 825 aa21.48■■□□□ 1.03
USP39-211ENST00000465282 SRGNP10124 158 aa21.48■■□□□ 1.03
USP39-211ENST00000465282 GCKRQ14397 625 aa21.48■■□□□ 1.03
USP39-211ENST00000465282 CWF19L2Q2TBE0 894 aaKnown RBP21.48■■□□□ 1.03
USP39-211ENST00000465282 FAM89AQ96GI7 184 aa21.48■■□□□ 1.03
USP39-211ENST00000465282 SRCIN1Q9C0H9 1055 aa21.48■■□□□ 1.03
USP39-211ENST00000465282 DDX60Q8IY21 1712 aaKnown RBP21.48■■□□□ 1.03
USP39-211ENST00000465282 COL11A2P13942 1736 aaPredicted RBP21.47■■□□□ 1.03
USP39-211ENST00000465282 CRY2Q49AN0 593 aa21.47■■□□□ 1.03
USP39-211ENST00000465282 STYK1Q6J9G0 422 aa21.47■■□□□ 1.03
USP39-211ENST00000465282 SLC4A10Q6U841 1118 aa21.47■■□□□ 1.03
USP39-211ENST00000465282 MASTLQ96GX5 879 aa21.47■■□□□ 1.03
USP39-211ENST00000465282 CDHR2Q9BYE9 1310 aa21.47■■□□□ 1.03
USP39-211ENST00000465282 GOLGB1Q14789 3259 aaKnown RBP21.46■■□□□ 1.03
USP39-211ENST00000465282 ARFGEF1Q9Y6D6 1849 aa21.46■■□□□ 1.03
USP39-211ENST00000465282 H7C1W4 665 aa21.46■■□□□ 1.03
USP39-211ENST00000465282 NPR1P16066 1061 aa21.46■■□□□ 1.03
USP39-211ENST00000465282 CHRNA5P30532 468 aa21.46■■□□□ 1.03
USP39-211ENST00000465282 MYH3P11055 1940 aa21.46■■□□□ 1.03
USP39-211ENST00000465282 TNRC6CQ9HCJ0 1690 aaKnown RBP21.46■■□□□ 1.03
USP39-211ENST00000465282 IRS4O14654 1257 aaPredicted RBP21.45■■□□□ 1.02
USP39-211ENST00000465282 CCT4P50991 539 aaKnown RBP21.45■■□□□ 1.02
USP39-211ENST00000465282 ATF7IPQ6VMQ6 1270 aa21.45■■□□□ 1.02
USP39-211ENST00000465282 CNKSR1Q969H4 720 aa21.45■■□□□ 1.02
USP39-211ENST00000465282 RCAN3Q9UKA8 241 aa21.45■■□□□ 1.02
USP39-211ENST00000465282 ALDH1B1P30837 517 aa21.44■■□□□ 1.02
USP39-211ENST00000465282 HOXA10P31260 410 aaPredicted RBP21.44■■□□□ 1.02
USP39-211ENST00000465282 ZKSCAN2Q63HK3 967 aa21.44■■□□□ 1.02
USP39-211ENST00000465282 SYNE4Q8N205 404 aa21.44■■□□□ 1.02
USP39-211ENST00000465282 TTLL6Q8N841 843 aa21.44■■□□□ 1.02
USP39-211ENST00000465282 HCLS1P14317 486 aaPredicted RBP21.43■■□□□ 1.02
USP39-211ENST00000465282 DALRD3Q5D0E6 543 aaKnown RBP21.43■■□□□ 1.02
USP39-211ENST00000465282 RPGRQ92834 1020 aaKnown RBP21.43■■□□□ 1.02
USP39-211ENST00000465282 FRAT1Q92837 279 aaPredicted RBP21.43■■□□□ 1.02
USP39-211ENST00000465282 ZNF622Q969S3 477 aaKnown RBP eCLIP21.43■■□□□ 1.02
USP39-211ENST00000465282 GRM8O00222 908 aa21.42■■□□□ 1.02
USP39-211ENST00000465282 PDE8AO60658 829 aa21.42■■□□□ 1.02
USP39-211ENST00000465282 SF3B3Q15393 1217 aaKnown RBP21.42■■□□□ 1.02
USP39-211ENST00000465282 GPR162Q16538 588 aa21.42■■□□□ 1.02
USP39-211ENST00000465282 C9orf78Q9NZ63 289 aaPredicted RBP21.42■■□□□ 1.02
USP39-211ENST00000465282 CACNA1SQ13698 1873 aa21.41■■□□□ 1.02
USP39-211ENST00000465282 ABCC4O15439 1325 aa21.41■■□□□ 1.02
USP39-211ENST00000465282 GRIN3BO60391 1043 aa21.41■■□□□ 1.02
USP39-211ENST00000465282 TRIM27P14373 513 aa21.41■■□□□ 1.02
USP39-211ENST00000465282 RTL5Q5HYW3 569 aaPredicted RBP21.41■■□□□ 1.02
USP39-211ENST00000465282 UBE3BQ7Z3V4 1068 aa21.41■■□□□ 1.02
USP39-211ENST00000465282 RBM17Q96I25 401 aaKnown RBP21.41■■□□□ 1.02
USP39-211ENST00000465282 CRAMP1Q96RY5 1269 aa21.41■■□□□ 1.02
USP39-211ENST00000465282 PLA2G12BQ9BX93 195 aa21.41■■□□□ 1.02
USP39-211ENST00000465282 UTYO14607 1347 aa21.4■■□□□ 1.02
USP39-211ENST00000465282 MS4A1P11836 297 aa21.4■■□□□ 1.02
USP39-211ENST00000465282 CASP7P55210 303 aa21.4■■□□□ 1.02
USP39-211ENST00000465282 INTS3Q68E01 1043 aaKnown RBP21.4■■□□□ 1.02
USP39-211ENST00000465282 BCS1LQ9Y276 419 aa21.4■■□□□ 1.02
USP39-211ENST00000465282 DDX46Q7L014 1031 aaKnown RBP21.38■■□□□ 1.01
USP39-211ENST00000465282 HDAC5Q9UQL6 1122 aa21.38■■□□□ 1.01
USP39-211ENST00000465282 SLX4Q8IY92 1834 aa21.38■■□□□ 1.01
USP39-211ENST00000465282 CCDC152Q4G0S7 254 aa21.37■■□□□ 1.01
USP39-211ENST00000465282 C3orf67Q6ZVT6 689 aa21.37■■□□□ 1.01
USP39-211ENST00000465282 PELP1Q8IZL8 1130 aaKnown RBP21.37■■□□□ 1.01
USP39-211ENST00000465282 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.37■■□□□ 1.01
USP39-211ENST00000465282 YBX3P16989 372 aaKnown RBP eCLIP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms