RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 RTN1Q16799 776 aa9.73□□□□□ -0.85
UBR4-209ENST00000465036 RAB44Q7Z6P3 723 aaPredicted RBP9.73□□□□□ -0.85
UBR4-209ENST00000465036 PROSER2Q86WR7 435 aaPredicted RBP9.73□□□□□ -0.85
UBR4-209ENST00000465036 SCG3Q8WXD2 468 aaKnown RBP9.73□□□□□ -0.85
UBR4-209ENST00000465036 LILRB5O75023 590 aa9.72□□□□□ -0.85
UBR4-209ENST00000465036 SEMA6BQ9H3T3 888 aa9.72□□□□□ -0.85
UBR4-209ENST00000465036 IGFBP4P22692 258 aa9.71□□□□□ -0.86
UBR4-209ENST00000465036 RSPO4Q2I0M5 234 aaPredicted RBP9.71□□□□□ -0.86
UBR4-209ENST00000465036 NKAPLQ5M9Q1 402 aa9.71□□□□□ -0.86
UBR4-209ENST00000465036 LARP1Q6PKG0 1096 aaKnown RBP9.71□□□□□ -0.86
UBR4-209ENST00000465036 C8orf86Q6ZUL3 223 aa9.71□□□□□ -0.86
UBR4-209ENST00000465036 BHMTQ93088 406 aa9.71□□□□□ -0.86
UBR4-209ENST00000465036 C11orf16Q9NQ32 467 aa9.71□□□□□ -0.86
UBR4-209ENST00000465036 TGFBR3LH3BV60 316 aa9.7□□□□□ -0.86
UBR4-209ENST00000465036 PTK7Q13308 1070 aa9.7□□□□□ -0.86
UBR4-209ENST00000465036 PPP1R12CQ9BZL4 782 aa9.7□□□□□ -0.86
UBR4-209ENST00000465036 GSX2Q9BZM3 304 aa9.7□□□□□ -0.86
UBR4-209ENST00000465036 DMGDHQ9UI17 866 aaKnown RBP9.7□□□□□ -0.86
UBR4-209ENST00000465036 FAM196BA6NMK8 535 aa9.69□□□□□ -0.86
UBR4-209ENST00000465036 KANK4Q5T7N3 995 aaPredicted RBP9.69□□□□□ -0.86
UBR4-209ENST00000465036 ILDR2Q71H61 639 aa9.69□□□□□ -0.86
UBR4-209ENST00000465036 CLUAP1Q96AJ1 413 aa9.69□□□□□ -0.86
UBR4-209ENST00000465036 SLC6A14Q9UN76 642 aa9.69□□□□□ -0.86
UBR4-209ENST00000465036 A6NJR5 290 aa9.68□□□□□ -0.86
UBR4-209ENST00000465036 C9orf172C9J069 976 aa9.68□□□□□ -0.86
UBR4-209ENST00000465036 TMEM132AQ24JP5 1023 aa9.68□□□□□ -0.86
UBR4-209ENST00000465036 UBE2OQ9C0C9 1292 aaKnown RBP9.68□□□□□ -0.86
UBR4-209ENST00000465036 TPSG1Q9NRR2 321 aa9.68□□□□□ -0.86
UBR4-209ENST00000465036 FAM229AH3BQW9 127 aa9.67□□□□□ -0.86
UBR4-209ENST00000465036 DPYDQ12882 1025 aa9.67□□□□□ -0.86
UBR4-209ENST00000465036 CCINQ13939 588 aa9.67□□□□□ -0.86
UBR4-209ENST00000465036 PCSK7Q16549 785 aa9.67□□□□□ -0.86
UBR4-209ENST00000465036 CRTC2Q53ET0 693 aaPredicted RBP9.67□□□□□ -0.86
UBR4-209ENST00000465036 CHMP7Q8WUX9 453 aaPredicted RBP9.67□□□□□ -0.86
UBR4-209ENST00000465036 BCS1LQ9Y276 419 aa9.67□□□□□ -0.86
UBR4-209ENST00000465036 ELNP15502 786 aa9.66□□□□□ -0.86
UBR4-209ENST00000465036 TRAPPC3LQ5T215 181 aa9.66□□□□□ -0.86
UBR4-209ENST00000465036 ANKMY2Q8IV38 441 aa9.66□□□□□ -0.86
UBR4-209ENST00000465036 NGLY1Q96IV0 654 aa9.66□□□□□ -0.86
UBR4-209ENST00000465036 HINFPQ9BQA5 517 aa9.66□□□□□ -0.86
UBR4-209ENST00000465036 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.66□□□□□ -0.86
UBR4-209ENST00000465036 A0A0A0MRY4 1105 aa9.65□□□□□ -0.86
UBR4-209ENST00000465036 MAP3K6O95382 1288 aa9.65□□□□□ -0.86
UBR4-209ENST00000465036 EPB42P16452 691 aa9.65□□□□□ -0.86
UBR4-209ENST00000465036 GRIK4Q16099 956 aa9.65□□□□□ -0.86
UBR4-209ENST00000465036 CALR3Q96L12 384 aaKnown RBP9.65□□□□□ -0.86
UBR4-209ENST00000465036 DNAJB12Q9NXW2 375 aaKnown RBP9.65□□□□□ -0.86
UBR4-209ENST00000465036 USP17L15C9J2P7 530 aa9.64□□□□□ -0.87
UBR4-209ENST00000465036 USP17L10C9JJH3 530 aa9.64□□□□□ -0.87
UBR4-209ENST00000465036 USP17L13C9JLJ4 530 aa9.64□□□□□ -0.87
UBR4-209ENST00000465036 USP17L12C9JPN9 530 aa9.64□□□□□ -0.87
UBR4-209ENST00000465036 USP17L11C9JVI0 530 aa9.64□□□□□ -0.87
UBR4-209ENST00000465036 USP17L21D6R901 530 aa9.64□□□□□ -0.87
UBR4-209ENST00000465036 USP17L18D6R9N7 530 aa9.64□□□□□ -0.87
UBR4-209ENST00000465036 USP17L22D6RA61 530 aa9.64□□□□□ -0.87
UBR4-209ENST00000465036 USP17L17D6RBQ6 530 aa9.64□□□□□ -0.87
UBR4-209ENST00000465036 USP17L19D6RCP7 530 aa9.64□□□□□ -0.87
UBR4-209ENST00000465036 USP17L20D6RJB6 530 aa9.64□□□□□ -0.87
UBR4-209ENST00000465036 INPP5BP32019 993 aa9.64□□□□□ -0.87
UBR4-209ENST00000465036 NRG1Q02297 640 aaPredicted RBP9.64□□□□□ -0.87
UBR4-209ENST00000465036 USP17L24Q0WX57 530 aa9.64□□□□□ -0.87
UBR4-209ENST00000465036 ADGRE1Q14246 886 aa9.64□□□□□ -0.87
UBR4-209ENST00000465036 LENG1Q96BZ8 264 aaPredicted RBP9.64□□□□□ -0.87
UBR4-209ENST00000465036 PNMA5Q96PV4 448 aa9.64□□□□□ -0.87
UBR4-209ENST00000465036 VRTNQ9H8Y1 702 aa9.64□□□□□ -0.87
UBR4-209ENST00000465036 JPH1Q9HDC5 661 aaPredicted RBP9.64□□□□□ -0.87
UBR4-209ENST00000465036 FOXO3O43524 673 aa9.63□□□□□ -0.87
UBR4-209ENST00000465036 DYRK3O43781 588 aa9.63□□□□□ -0.87
UBR4-209ENST00000465036 AFF1P51825 1210 aaKnown RBP9.63□□□□□ -0.87
UBR4-209ENST00000465036 RAC1P63000 192 aa9.63□□□□□ -0.87
UBR4-209ENST00000465036 SELPP16109 830 aa9.62□□□□□ -0.87
UBR4-209ENST00000465036 WEE1P30291 646 aa9.62□□□□□ -0.87
UBR4-209ENST00000465036 ZMYM1Q5SVZ6 1142 aa9.62□□□□□ -0.87
UBR4-209ENST00000465036 ARXQ96QS3 562 aa9.62□□□□□ -0.87
UBR4-209ENST00000465036 FRRS1LQ9P0K9 344 aa9.62□□□□□ -0.87
UBR4-209ENST00000465036 H2AFB1P0C5Y9 115 aa9.61□□□□□ -0.87
UBR4-209ENST00000465036 H2AFB2P0C5Z0 115 aa9.61□□□□□ -0.87
UBR4-209ENST00000465036 NFKB1P19838 968 aa9.61□□□□□ -0.87
UBR4-209ENST00000465036 GRNP28799 593 aaKnown RBP9.61□□□□□ -0.87
UBR4-209ENST00000465036 MBTPS1Q14703 1052 aa9.61□□□□□ -0.87
UBR4-209ENST00000465036 PSAPL1Q6NUJ1 521 aa9.61□□□□□ -0.87
UBR4-209ENST00000465036 MYO19Q96H55 970 aa9.61□□□□□ -0.87
UBR4-209ENST00000465036 NAGPAQ9UK23 515 aa9.61□□□□□ -0.87
UBR4-209ENST00000465036 RGS9O75916 674 aaPredicted RBP9.6□□□□□ -0.87
UBR4-209ENST00000465036 TBC1D8BQ0IIM8 1120 aa9.6□□□□□ -0.87
UBR4-209ENST00000465036 DTWD1Q8N5C7 304 aa9.6□□□□□ -0.87
UBR4-209ENST00000465036 NUDT8Q8WV74 236 aa9.6□□□□□ -0.87
UBR4-209ENST00000465036 TTC9Q92623 222 aa9.6□□□□□ -0.87
UBR4-209ENST00000465036 IGFLR1Q9H665 355 aa9.6□□□□□ -0.87
UBR4-209ENST00000465036 LMOD1P29536 600 aaPredicted RBP9.59□□□□□ -0.87
UBR4-209ENST00000465036 IDH3AP50213 366 aa9.59□□□□□ -0.87
UBR4-209ENST00000465036 ARSDP51689 593 aa9.59□□□□□ -0.87
UBR4-209ENST00000465036 TXNRD3Q86VQ6 643 aa9.59□□□□□ -0.87
UBR4-209ENST00000465036 FMR1NBQ8N0W7 255 aaPredicted RBP9.59□□□□□ -0.87
UBR4-209ENST00000465036 TRPM4Q8TD43 1214 aa9.59□□□□□ -0.87
UBR4-209ENST00000465036 QTRT2Q9H974 415 aaKnown RBP9.58□□□□□ -0.88
UBR4-209ENST00000465036 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.58□□□□□ -0.88
UBR4-209ENST00000465036 C11orf91Q3C1V1 193 aa9.57□□□□□ -0.88
UBR4-209ENST00000465036 KLK14Q9P0G3 267 aa9.57□□□□□ -0.88
UBR4-209ENST00000465036 MICAL2O94851 1124 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms