RNA–Protein interactions for RNA: ENST00000464981.1

PCDH19-204, Transcript of protocadherin 19, humanhuman

TSL 3

Gene PCDH19, Length 329 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-204ENST00000464981 SPEM2Q0P670 501 aa9.65□□□□□ -0.86
PCDH19-204ENST00000464981 C11orf91Q3C1V1 193 aa9.65□□□□□ -0.86
PCDH19-204ENST00000464981 GALNT6Q8NCL4 622 aa9.65□□□□□ -0.86
PCDH19-204ENST00000464981 COL26A1Q96A83 441 aa9.65□□□□□ -0.86
PCDH19-204ENST00000464981 LRRC4BQ9NT99 713 aa9.65□□□□□ -0.86
PCDH19-204ENST00000464981 SEPT3Q9UH03 358 aa9.65□□□□□ -0.86
PCDH19-204ENST00000464981 KCNH4Q9UQ05 1017 aa9.65□□□□□ -0.86
PCDH19-204ENST00000464981 DNMT3AQ9Y6K1 912 aaPredicted RBP9.65□□□□□ -0.86
PCDH19-204ENST00000464981 ADH6P28332 368 aa9.64□□□□□ -0.87
PCDH19-204ENST00000464981 INPP5BP32019 993 aa9.64□□□□□ -0.87
PCDH19-204ENST00000464981 IDH3AP50213 366 aa9.64□□□□□ -0.87
PCDH19-204ENST00000464981 SYT9Q86SS6 491 aa9.64□□□□□ -0.87
PCDH19-204ENST00000464981 EDARADDQ8WWZ3 215 aa9.64□□□□□ -0.87
PCDH19-204ENST00000464981 IFT43Q96FT9 208 aa9.64□□□□□ -0.87
PCDH19-204ENST00000464981 MICAL2O94851 1124 aa9.63□□□□□ -0.87
PCDH19-204ENST00000464981 EPXP11678 715 aa9.63□□□□□ -0.87
PCDH19-204ENST00000464981 C16orf46Q6P387 395 aa9.63□□□□□ -0.87
PCDH19-204ENST00000464981 ETFBKMTQ8IXQ9 262 aa9.63□□□□□ -0.87
PCDH19-204ENST00000464981 OPLAHO14841 1288 aa9.62□□□□□ -0.87
PCDH19-204ENST00000464981 PHLDB3Q6NSJ2 640 aa9.62□□□□□ -0.87
PCDH19-204ENST00000464981 NEDD1Q8NHV4 660 aa9.62□□□□□ -0.87
PCDH19-204ENST00000464981 MDFIQ99750 246 aa9.62□□□□□ -0.87
PCDH19-204ENST00000464981 AVENQ9NQS1 362 aaPredicted RBP9.62□□□□□ -0.87
PCDH19-204ENST00000464981 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.62□□□□□ -0.87
PCDH19-204ENST00000464981 USP20Q9Y2K6 914 aa9.62□□□□□ -0.87
PCDH19-204ENST00000464981 HOXB4P17483 251 aaPredicted RBP9.61□□□□□ -0.87
PCDH19-204ENST00000464981 SSFA2P28290 1259 aa9.61□□□□□ -0.87
PCDH19-204ENST00000464981 GSK3AP49840 483 aa9.61□□□□□ -0.87
PCDH19-204ENST00000464981 ENAMQ9NRM1 1142 aa9.61□□□□□ -0.87
PCDH19-204ENST00000464981 PTCD1O75127 700 aaKnown RBP9.6□□□□□ -0.87
PCDH19-204ENST00000464981 SNRPNP63162 240 aaKnown RBP9.6□□□□□ -0.87
PCDH19-204ENST00000464981 TREML1Q86YW5 311 aa9.6□□□□□ -0.87
PCDH19-204ENST00000464981 MARSP56192 900 aaKnown RBP9.59□□□□□ -0.87
PCDH19-204ENST00000464981 BHMTQ93088 406 aa9.59□□□□□ -0.87
PCDH19-204ENST00000464981 GSX2Q9BZM3 304 aa9.59□□□□□ -0.87
PCDH19-204ENST00000464981 CNTNAP5Q8WYK1 1306 aa9.58□□□□□ -0.88
PCDH19-204ENST00000464981 SIN3BO75182 1162 aa9.58□□□□□ -0.88
PCDH19-204ENST00000464981 ARSDP51689 593 aa9.58□□□□□ -0.88
PCDH19-204ENST00000464981 BTBD6Q96KE9 485 aa9.58□□□□□ -0.88
PCDH19-204ENST00000464981 ZBTB39O15060 712 aa9.57□□□□□ -0.88
PCDH19-204ENST00000464981 RETREG2Q8NC44 543 aa9.57□□□□□ -0.88
PCDH19-204ENST00000464981 RTCBQ9Y3I0 505 aaKnown RBP9.57□□□□□ -0.88
PCDH19-204ENST00000464981 AMPD1P23109 780 aa9.56□□□□□ -0.88
PCDH19-204ENST00000464981 CHSY3Q70JA7 882 aa9.56□□□□□ -0.88
PCDH19-204ENST00000464981 RGL4Q8IZJ4 473 aa9.56□□□□□ -0.88
PCDH19-204ENST00000464981 NFKB1P19838 968 aa9.55□□□□□ -0.88
PCDH19-204ENST00000464981 BRD2P25440 801 aaKnown RBP9.55□□□□□ -0.88
PCDH19-204ENST00000464981 IRS1P35568 1242 aa9.55□□□□□ -0.88
PCDH19-204ENST00000464981 CCINQ13939 588 aa9.55□□□□□ -0.88
PCDH19-204ENST00000464981 RRAGCQ9HB90 399 aa9.55□□□□□ -0.88
PCDH19-204ENST00000464981 ZFATQ9P243 1243 aa9.55□□□□□ -0.88
PCDH19-204ENST00000464981 USTQ9Y2C2 406 aa9.55□□□□□ -0.88
PCDH19-204ENST00000464981 ELOA3CA0A087WX78 387 aaPredicted RBP9.54□□□□□ -0.88
PCDH19-204ENST00000464981 ELOA3DA6NLF2 546 aaPredicted RBP9.54□□□□□ -0.88
PCDH19-204ENST00000464981 ADARB2-AS1A8MUL3 147 aa9.54□□□□□ -0.88
PCDH19-204ENST00000464981 EPB42P16452 691 aa9.54□□□□□ -0.88
PCDH19-204ENST00000464981 DGKGP49619 791 aa9.54□□□□□ -0.88
PCDH19-204ENST00000464981 KCNMA1Q12791 1236 aa9.54□□□□□ -0.88
PCDH19-204ENST00000464981 MTMR3Q13615 1198 aa9.54□□□□□ -0.88
PCDH19-204ENST00000464981 ELOA3BQ3SY89 546 aa9.54□□□□□ -0.88
PCDH19-204ENST00000464981 KRT25Q7Z3Z0 450 aa9.54□□□□□ -0.88
PCDH19-204ENST00000464981 ELOA3Q8NG57 546 aa9.54□□□□□ -0.88
PCDH19-204ENST00000464981 TNFRSF25Q93038 417 aa9.54□□□□□ -0.88
PCDH19-204ENST00000464981 STIM2Q9P246 746 aa9.54□□□□□ -0.88
PCDH19-204ENST00000464981 KCNMB2Q9Y691 235 aa9.54□□□□□ -0.88
PCDH19-204ENST00000464981 ADH7P40394 386 aa9.53□□□□□ -0.88
PCDH19-204ENST00000464981 NEUROD1Q13562 356 aa9.53□□□□□ -0.88
PCDH19-204ENST00000464981 TRIP4Q15650 581 aaPredicted RBP9.53□□□□□ -0.88
PCDH19-204ENST00000464981 LINC00114Q6XXX2 140 aa9.53□□□□□ -0.88
PCDH19-204ENST00000464981 GTF3C2Q8WUA4 911 aaPredicted RBP9.53□□□□□ -0.88
PCDH19-204ENST00000464981 SCARF2Q96GP6 870 aaPredicted RBP9.53□□□□□ -0.88
PCDH19-204ENST00000464981 STARD13Q9Y3M8 1113 aa9.53□□□□□ -0.88
PCDH19-204ENST00000464981 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.53□□□□□ -0.88
PCDH19-204ENST00000464981 SASH3O75995 380 aa9.52□□□□□ -0.89
PCDH19-204ENST00000464981 TARSP26639 723 aaKnown RBP9.52□□□□□ -0.89
PCDH19-204ENST00000464981 CMTR1Q8N1G2 835 aaKnown RBP9.52□□□□□ -0.89
PCDH19-204ENST00000464981 HELQQ8TDG4 1101 aa9.52□□□□□ -0.89
PCDH19-204ENST00000464981 ZAP70P43403 619 aa9.51□□□□□ -0.89
PCDH19-204ENST00000464981 RASSF7Q02833 373 aa9.51□□□□□ -0.89
PCDH19-204ENST00000464981 TBC1D8BQ0IIM8 1120 aa9.51□□□□□ -0.89
PCDH19-204ENST00000464981 ATCAYQ86WG3 371 aa9.51□□□□□ -0.89
PCDH19-204ENST00000464981 PNMA5Q96PV4 448 aa9.51□□□□□ -0.89
PCDH19-204ENST00000464981 IGFLR1Q9H665 355 aa9.51□□□□□ -0.89
PCDH19-204ENST00000464981 RNF225M0QZC1 329 aaPredicted RBP9.5□□□□□ -0.89
PCDH19-204ENST00000464981 XYLBO75191 536 aa9.5□□□□□ -0.89
PCDH19-204ENST00000464981 PODNQ7Z5L7 613 aa9.5□□□□□ -0.89
PCDH19-204ENST00000464981 BEND7Q8N7W2 519 aaPredicted RBP9.5□□□□□ -0.89
PCDH19-204ENST00000464981 MAP3K6O95382 1288 aa9.49□□□□□ -0.89
PCDH19-204ENST00000464981 ALBP02768 609 aa9.49□□□□□ -0.89
PCDH19-204ENST00000464981 UBE2OQ9C0C9 1292 aaKnown RBP9.49□□□□□ -0.89
PCDH19-204ENST00000464981 DNAJB12Q9NXW2 375 aaKnown RBP9.49□□□□□ -0.89
PCDH19-204ENST00000464981 NAGPAQ9UK23 515 aa9.49□□□□□ -0.89
PCDH19-204ENST00000464981 SLC6A14Q9UN76 642 aa9.49□□□□□ -0.89
PCDH19-204ENST00000464981 EGFRP00533 1210 aa9.48□□□□□ -0.89
PCDH19-204ENST00000464981 RARAP10276 462 aa9.48□□□□□ -0.89
PCDH19-204ENST00000464981 ALAS2P22557 587 aa9.48□□□□□ -0.89
PCDH19-204ENST00000464981 MPSTP25325 297 aa9.48□□□□□ -0.89
PCDH19-204ENST00000464981 C8orf86Q6ZUL3 223 aa9.48□□□□□ -0.89
PCDH19-204ENST00000464981 GPR152Q8TDT2 470 aa9.48□□□□□ -0.89
PCDH19-204ENST00000464981 SUV39H2Q9H5I1 410 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms