RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 RUFY2Q8WXA3 655 aa14.93□□□□□ -0.02
CLCNKA-204ENST00000464764 SLC27A2O14975 620 aa14.93□□□□□ -0.02
CLCNKA-204ENST00000464764 IFIT2P09913 472 aaKnown RBP14.93□□□□□ -0.02
CLCNKA-204ENST00000464764 FOSBP53539 338 aa14.93□□□□□ -0.02
CLCNKA-204ENST00000464764 NLRP6P59044 892 aa14.93□□□□□ -0.02
CLCNKA-204ENST00000464764 CLIP2Q9UDT6 1046 aa14.93□□□□□ -0.02
CLCNKA-204ENST00000464764 NRXN3Q9Y4C0 1643 aa14.93□□□□□ -0.02
CLCNKA-204ENST00000464764 PPFIA3O75145 1194 aa14.92□□□□□ -0.02
CLCNKA-204ENST00000464764 PLA2G4DQ86XP0 818 aa14.92□□□□□ -0.02
CLCNKA-204ENST00000464764 BICD2Q8TD16 824 aa14.92□□□□□ -0.02
CLCNKA-204ENST00000464764 TM6SF1Q9BZW5 370 aa14.92□□□□□ -0.02
CLCNKA-204ENST00000464764 TLR7Q9NYK1 1049 aaKnown RBP14.92□□□□□ -0.02
CLCNKA-204ENST00000464764 CTNNA3Q9UI47 895 aa14.92□□□□□ -0.02
CLCNKA-204ENST00000464764 MAP3K5Q99683 1374 aa14.92□□□□□ -0.02
CLCNKA-204ENST00000464764 RGPD1P0DJD0 1748 aa14.92□□□□□ -0.02
CLCNKA-204ENST00000464764 A0A0D9SFI3 127 aa14.92□□□□□ -0.02
CLCNKA-204ENST00000464764 OSCARQ8IYS5 282 aa14.92□□□□□ -0.02
CLCNKA-204ENST00000464764 CHGBP05060 677 aa14.91□□□□□ -0.02
CLCNKA-204ENST00000464764 EDC3Q96F86 508 aaKnown RBP14.91□□□□□ -0.02
CLCNKA-204ENST00000464764 BOLA2Q9H3K6 86 aa14.91□□□□□ -0.02
CLCNKA-204ENST00000464764 SBNO1A3KN83 1393 aa14.91□□□□□ -0.02
CLCNKA-204ENST00000464764 CWF19L2Q2TBE0 894 aaKnown RBP14.91□□□□□ -0.02
CLCNKA-204ENST00000464764 FBXW7Q969H0 707 aa14.91□□□□□ -0.02
CLCNKA-204ENST00000464764 TTC21AQ8NDW8 1320 aa14.91□□□□□ -0.02
CLCNKA-204ENST00000464764 AKAP12Q02952 1782 aa14.91□□□□□ -0.02
CLCNKA-204ENST00000464764 TTC41PQ6P2S7 1318 aa14.91□□□□□ -0.02
CLCNKA-204ENST00000464764 SMTNL1A8MU46 457 aa14.91□□□□□ -0.02
CLCNKA-204ENST00000464764 TOB2Q14106 344 aaPredicted RBP14.91□□□□□ -0.02
CLCNKA-204ENST00000464764 ERCC4Q92889 916 aaPredicted RBP14.91□□□□□ -0.02
CLCNKA-204ENST00000464764 MAP4K1Q92918 833 aa14.91□□□□□ -0.02
CLCNKA-204ENST00000464764 KCNB2Q92953 911 aa14.91□□□□□ -0.02
CLCNKA-204ENST00000464764 HTATSF1O43719 755 aaKnown RBP14.9□□□□□ -0.02
CLCNKA-204ENST00000464764 ZNF771Q7L3S4 317 aaPredicted RBP14.9□□□□□ -0.02
CLCNKA-204ENST00000464764 CCDC112Q8NEF3 446 aa14.9□□□□□ -0.02
CLCNKA-204ENST00000464764 SIRT1Q96EB6 747 aa14.9□□□□□ -0.02
CLCNKA-204ENST00000464764 FTOQ9C0B1 505 aaKnown RBP eCLIP14.9□□□□□ -0.02
CLCNKA-204ENST00000464764 SIL1Q9H173 461 aa14.9□□□□□ -0.02
CLCNKA-204ENST00000464764 CLSTN2Q9H4D0 955 aa14.9□□□□□ -0.02
CLCNKA-204ENST00000464764 TRMT1Q9NXH9 659 aaKnown RBP14.9□□□□□ -0.02
CLCNKA-204ENST00000464764 NPHP1O15259 732 aa14.9□□□□□ -0.02
CLCNKA-204ENST00000464764 KIF20AO95235 890 aa14.9□□□□□ -0.02
CLCNKA-204ENST00000464764 ZNF589Q86UQ0 364 aaPredicted RBP14.9□□□□□ -0.02
CLCNKA-204ENST00000464764 KLHDC4Q8TBB5 520 aa14.9□□□□□ -0.02
CLCNKA-204ENST00000464764 EAF2Q96CJ1 260 aaPredicted RBP14.9□□□□□ -0.02
CLCNKA-204ENST00000464764 C9orf78Q9NZ63 289 aaPredicted RBP14.9□□□□□ -0.02
CLCNKA-204ENST00000464764 ITSN1Q15811 1721 aa14.9□□□□□ -0.02
CLCNKA-204ENST00000464764 HOXC9P31274 260 aa14.89□□□□□ -0.03
CLCNKA-204ENST00000464764 EIF4A1P60842 406 aaKnown RBP14.89□□□□□ -0.03
CLCNKA-204ENST00000464764 PROSER3Q2NL68 480 aa14.89□□□□□ -0.03
CLCNKA-204ENST00000464764 BLOC1S2Q6QNY1 142 aa14.89□□□□□ -0.03
CLCNKA-204ENST00000464764 C11orf57Q6ZUT1 292 aaPredicted RBP14.89□□□□□ -0.03
CLCNKA-204ENST00000464764 OGFRQ9NZT2 677 aa14.89□□□□□ -0.03
CLCNKA-204ENST00000464764 NDUFB9Q9Y6M9 179 aa14.89□□□□□ -0.03
CLCNKA-204ENST00000464764 ELP1O95163 1332 aa14.89□□□□□ -0.03
CLCNKA-204ENST00000464764 EVI5LQ96CN4 794 aa14.89□□□□□ -0.03
CLCNKA-204ENST00000464764 USP16Q9Y5T5 823 aa14.89□□□□□ -0.03
CLCNKA-204ENST00000464764 USP42Q9H9J4 1324 aaKnown RBP14.89□□□□□ -0.03
CLCNKA-204ENST00000464764 TDRD7Q8NHU6 1098 aaKnown RBP14.89□□□□□ -0.03
CLCNKA-204ENST00000464764 SYTL4Q96C24 671 aaPredicted RBP14.89□□□□□ -0.03
CLCNKA-204ENST00000464764 LRRC2Q9BYS8 371 aa14.89□□□□□ -0.03
CLCNKA-204ENST00000464764 SCAND2PQ9GZW5 306 aaPredicted RBP14.89□□□□□ -0.03
CLCNKA-204ENST00000464764 PPP6R1Q9UPN7 881 aa14.89□□□□□ -0.03
CLCNKA-204ENST00000464764 PRAMEF22A3QJZ6 481 aa14.88□□□□□ -0.03
CLCNKA-204ENST00000464764 HSP90AB4PQ58FF6 505 aa14.88□□□□□ -0.03
CLCNKA-204ENST00000464764 FILIP1Q7Z7B0 1213 aa14.88□□□□□ -0.03
CLCNKA-204ENST00000464764 SASH1O94885 1247 aa14.88□□□□□ -0.03
CLCNKA-204ENST00000464764 LTKP29376 864 aa14.88□□□□□ -0.03
CLCNKA-204ENST00000464764 CEP135Q66GS9 1140 aa14.88□□□□□ -0.03
CLCNKA-204ENST00000464764 FEZ1Q99689 392 aa14.88□□□□□ -0.03
CLCNKA-204ENST00000464764 MAP3K2Q9Y2U5 619 aa14.88□□□□□ -0.03
CLCNKA-204ENST00000464764 NPHP3Q7Z494 1330 aa14.87□□□□□ -0.03
CLCNKA-204ENST00000464764 RPS6KB1P23443 525 aa14.87□□□□□ -0.03
CLCNKA-204ENST00000464764 DDX19AQ9NUU7 478 aaKnown RBP14.87□□□□□ -0.03
CLCNKA-204ENST00000464764 ZNF215Q9UL58 517 aaPredicted RBP14.87□□□□□ -0.03
CLCNKA-204ENST00000464764 ADCY9O60503 1353 aa14.87□□□□□ -0.03
CLCNKA-204ENST00000464764 PDCP20941 246 aa14.87□□□□□ -0.03
CLCNKA-204ENST00000464764 BRF1Q92994 677 aa14.87□□□□□ -0.03
CLCNKA-204ENST00000464764 FSD1Q9BTV5 496 aa14.87□□□□□ -0.03
CLCNKA-204ENST00000464764 FAM208AQ9UK61 1670 aaKnown RBP14.87□□□□□ -0.03
CLCNKA-204ENST00000464764 TECPR2O15040 1411 aa14.87□□□□□ -0.03
CLCNKA-204ENST00000464764 MAPK8IP2Q13387 824 aaPredicted RBP14.86□□□□□ -0.03
CLCNKA-204ENST00000464764 RBM43Q6ZSC3 357 aaKnown RBP14.86□□□□□ -0.03
CLCNKA-204ENST00000464764 C14orf37Q86TY3 774 aa14.86□□□□□ -0.03
CLCNKA-204ENST00000464764 LRRC8AQ8IWT6 810 aa14.86□□□□□ -0.03
CLCNKA-204ENST00000464764 DDX41Q9UJV9 622 aaKnown RBP14.86□□□□□ -0.03
CLCNKA-204ENST00000464764 SPATA31D1Q6ZQQ2 1576 aa14.86□□□□□ -0.03
CLCNKA-204ENST00000464764 FAM69CQ0P6D2 419 aa14.86□□□□□ -0.03
CLCNKA-204ENST00000464764 CGNQ9P2M7 1197 aaKnown RBP14.86□□□□□ -0.03
CLCNKA-204ENST00000464764 PSMA5P28066 241 aa14.86□□□□□ -0.03
CLCNKA-204ENST00000464764 KMT5BQ4FZB7 885 aa14.86□□□□□ -0.03
CLCNKA-204ENST00000464764 IQCB1Q15051 598 aa14.85□□□□□ -0.03
CLCNKA-204ENST00000464764 MPRIPQ6WCQ1 1025 aa14.85□□□□□ -0.03
CLCNKA-204ENST00000464764 GPATCH3Q96I76 525 aa14.85□□□□□ -0.03
CLCNKA-204ENST00000464764 ST7Q9NRC1 585 aa14.85□□□□□ -0.03
CLCNKA-204ENST00000464764 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.85□□□□□ -0.03
CLCNKA-204ENST00000464764 ZBTB22O15209 634 aa14.85□□□□□ -0.03
CLCNKA-204ENST00000464764 SKILP12757 684 aa14.85□□□□□ -0.03
CLCNKA-204ENST00000464764 PLPPR3Q6T4P5 718 aa14.85□□□□□ -0.03
CLCNKA-204ENST00000464764 KIF18AQ8NI77 898 aa14.85□□□□□ -0.03
CLCNKA-204ENST00000464764 PAXBP1Q9Y5B6 917 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms