RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 ALDH1B1P30837 517 aa33.64■■■□□ 2.98
U2AF1-206ENST00000464750 DUSP27Q5VZP5 1158 aa33.63■■■□□ 2.97
U2AF1-206ENST00000464750 GNAI1P63096 354 aa33.62■■■□□ 2.97
U2AF1-206ENST00000464750 HSP90AB3PQ58FF7 597 aa33.62■■■□□ 2.97
U2AF1-206ENST00000464750 OLFM4Q6UX06 510 aa33.61■■■□□ 2.97
U2AF1-206ENST00000464750 RBM46Q8TBY0 533 aaKnown RBP33.61■■■□□ 2.97
U2AF1-206ENST00000464750 RPGRQ92834 1020 aaKnown RBP33.61■■■□□ 2.97
U2AF1-206ENST00000464750 CEP350Q5VT06 3117 aa33.6■■■□□ 2.97
U2AF1-206ENST00000464750 UTP14AQ9BVJ6 771 aaKnown RBP33.6■■■□□ 2.97
U2AF1-206ENST00000464750 DBF4Q9UBU7 674 aaPredicted RBP33.6■■■□□ 2.97
U2AF1-206ENST00000464750 WDR90Q96KV7 1748 aa33.59■■■□□ 2.97
U2AF1-206ENST00000464750 ANP32CO43423 234 aa33.59■■■□□ 2.97
U2AF1-206ENST00000464750 LAMB2P55268 1798 aa33.59■■■□□ 2.97
U2AF1-206ENST00000464750 FKBP4Q02790 459 aaKnown RBP eCLIP33.58■■■□□ 2.97
U2AF1-206ENST00000464750 RNF123Q5XPI4 1314 aa33.57■■■□□ 2.97
U2AF1-206ENST00000464750 C3orf67Q6ZVT6 689 aa33.57■■■□□ 2.96
U2AF1-206ENST00000464750 NLRP10Q86W26 655 aa33.57■■■□□ 2.96
U2AF1-206ENST00000464750 MRS2Q9HD23 443 aa33.57■■■□□ 2.96
U2AF1-206ENST00000464750 HOXA10P31260 410 aaPredicted RBP33.56■■■□□ 2.96
U2AF1-206ENST00000464750 TCIRG1Q13488 830 aa33.56■■■□□ 2.96
U2AF1-206ENST00000464750 RTKN2Q8IZC4 609 aa33.56■■■□□ 2.96
U2AF1-206ENST00000464750 DPY19L2Q6NUT2 758 aa33.55■■■□□ 2.96
U2AF1-206ENST00000464750 SNED1Q8TER0 1413 aa33.54■■■□□ 2.96
U2AF1-206ENST00000464750 PLBD2Q8NHP8 589 aa33.54■■■□□ 2.96
U2AF1-206ENST00000464750 RBM17Q96I25 401 aaKnown RBP33.54■■■□□ 2.96
U2AF1-206ENST00000464750 NLRP3Q96P20 1036 aa33.54■■■□□ 2.96
U2AF1-206ENST00000464750 HYPKQ9NX55 129 aa33.54■■■□□ 2.96
U2AF1-206ENST00000464750 VEGFAP15692 232 aaPredicted RBP33.53■■■□□ 2.96
U2AF1-206ENST00000464750 ZNF277Q9NRM2 450 aaPredicted RBP33.53■■■□□ 2.96
U2AF1-206ENST00000464750 ELL2O00472 640 aaPredicted RBP33.52■■■□□ 2.96
U2AF1-206ENST00000464750 SLC10A5Q5PT55 438 aa33.52■■■□□ 2.96
U2AF1-206ENST00000464750 CRAMP1Q96RY5 1269 aa33.52■■■□□ 2.96
U2AF1-206ENST00000464750 ANKRD13DQ6ZTN6 518 aa33.51■■■□□ 2.95
U2AF1-206ENST00000464750 FSTL1Q12841 308 aa33.5■■■□□ 2.95
U2AF1-206ENST00000464750 TRMT112Q9UI30 125 aaKnown RBP33.5■■■□□ 2.95
U2AF1-206ENST00000464750 PPEF1O14829 653 aaPredicted RBP33.49■■■□□ 2.95
U2AF1-206ENST00000464750 CC2D2BQ6DHV5 1058 aa33.49■■■□□ 2.95
U2AF1-206ENST00000464750 DDX60Q8IY21 1712 aaKnown RBP33.49■■■□□ 2.95
U2AF1-206ENST00000464750 C8orf58Q8NAV2 365 aa33.49■■■□□ 2.95
U2AF1-206ENST00000464750 SH3TC1Q8TE82 1336 aa33.49■■■□□ 2.95
U2AF1-206ENST00000464750 APLP1P51693 650 aa33.48■■■□□ 2.95
U2AF1-206ENST00000464750 CCDC27Q2M243 656 aa33.48■■■□□ 2.95
U2AF1-206ENST00000464750 SYNE4Q8N205 404 aa33.48■■■□□ 2.95
U2AF1-206ENST00000464750 HCLS1P14317 486 aaPredicted RBP33.47■■■□□ 2.95
U2AF1-206ENST00000464750 SMC1BQ8NDV3 1235 aa33.47■■■□□ 2.95
U2AF1-206ENST00000464750 PSMD1Q99460 953 aa33.47■■■□□ 2.95
U2AF1-206ENST00000464750 POTECB2RU33 542 aa33.46■■■□□ 2.95
U2AF1-206ENST00000464750 DDNO94850 711 aaPredicted RBP33.46■■■□□ 2.95
U2AF1-206ENST00000464750 IARSP41252 1262 aaKnown RBP33.46■■■□□ 2.95
U2AF1-206ENST00000464750 ZNF428Q96B54 188 aa33.46■■■□□ 2.95
U2AF1-206ENST00000464750 SLC51AQ86UW1 340 aa33.45■■■□□ 2.95
U2AF1-206ENST00000464750 WWC1Q8IX03 1113 aa33.45■■■□□ 2.95
U2AF1-206ENST00000464750 ISCA1Q9BUE6 129 aa33.45■■■□□ 2.95
U2AF1-206ENST00000464750 ABCC4O15439 1325 aa33.45■■■□□ 2.95
U2AF1-206ENST00000464750 ATP5J2-PTCD1G3V325 749 aa33.44■■■□□ 2.94
U2AF1-206ENST00000464750 TCERG1O14776 1098 aaKnown RBP33.44■■■□□ 2.94
U2AF1-206ENST00000464750 GOLGA2Q08379 1002 aa33.44■■■□□ 2.94
U2AF1-206ENST00000464750 TSR2Q969E8 191 aaKnown RBP33.44■■■□□ 2.94
U2AF1-206ENST00000464750 PHAXQ9H814 394 aaKnown RBP33.43■■■□□ 2.94
U2AF1-206ENST00000464750 ZNF541Q9H0D2 1346 aa33.43■■■□□ 2.94
U2AF1-206ENST00000464750 SCN4AP35499 1836 aa33.42■■■□□ 2.94
U2AF1-206ENST00000464750 TAF1P21675 1872 aa33.42■■■□□ 2.94
U2AF1-206ENST00000464750 GRIPAP1Q4V328 841 aa33.41■■■□□ 2.94
U2AF1-206ENST00000464750 RIC3Q7Z5B4 369 aa33.41■■■□□ 2.94
U2AF1-206ENST00000464750 TSPYL6Q8N831 410 aa33.41■■■□□ 2.94
U2AF1-206ENST00000464750 CCDC30Q5VVM6 783 aa33.4■■■□□ 2.94
U2AF1-206ENST00000464750 COL4A5P29400 1685 aa33.39■■■□□ 2.94
U2AF1-206ENST00000464750 CHMP4AQ9BY43 222 aa33.39■■■□□ 2.94
U2AF1-206ENST00000464750 NCBP3Q53F19 620 aaKnown RBP33.38■■■□□ 2.93
U2AF1-206ENST00000464750 TMX4Q9H1E5 349 aaPredicted RBP33.38■■■□□ 2.93
U2AF1-206ENST00000464750 ATP6V0A2Q9Y487 856 aa33.38■■■□□ 2.93
U2AF1-206ENST00000464750 IL16Q14005 1332 aa33.37■■■□□ 2.93
U2AF1-206ENST00000464750 DDX46Q7L014 1031 aaKnown RBP33.37■■■□□ 2.93
U2AF1-206ENST00000464750 FAM89AQ96GI7 184 aa33.37■■■□□ 2.93
U2AF1-206ENST00000464750 L3MBTL3Q96JM7 780 aaPredicted RBP33.37■■■□□ 2.93
U2AF1-206ENST00000464750 FZD9O00144 591 aa33.36■■■□□ 2.93
U2AF1-206ENST00000464750 TRIM28Q13263 835 aaKnown RBP33.36■■■□□ 2.93
U2AF1-206ENST00000464750 JDP2Q8WYK2 163 aa33.36■■■□□ 2.93
U2AF1-206ENST00000464750 LRRC37AA6NMS7 1700 aa33.34■■■□□ 2.93
U2AF1-206ENST00000464750 IQCA1LA6NCM1 817 aa33.34■■■□□ 2.93
U2AF1-206ENST00000464750 GRAPQ13588 217 aa33.34■■■□□ 2.93
U2AF1-206ENST00000464750 GRAPLQ8TC17 118 aaPredicted RBP33.34■■■□□ 2.93
U2AF1-206ENST00000464750 MYD88Q99836 296 aa33.34■■■□□ 2.93
U2AF1-206ENST00000464750 BBOX1O75936 387 aa33.33■■■□□ 2.93
U2AF1-206ENST00000464750 RTL5Q5HYW3 569 aaPredicted RBP33.33■■■□□ 2.93
U2AF1-206ENST00000464750 LARGE2Q8N3Y3 721 aa33.33■■■□□ 2.93
U2AF1-206ENST00000464750 SALL2Q9Y467 1007 aaPredicted RBP33.33■■■□□ 2.93
U2AF1-206ENST00000464750 DDX58O95786 925 aaKnown RBP33.32■■■□□ 2.92
U2AF1-206ENST00000464750 HTRA3P83110 453 aa33.32■■■□□ 2.92
U2AF1-206ENST00000464750 TWISTNBQ3B726 338 aaPredicted RBP33.31■■■□□ 2.92
U2AF1-206ENST00000464750 SP8Q8IXZ3 490 aa33.3■■■□□ 2.92
U2AF1-206ENST00000464750 STK31Q9BXU1 1019 aa33.3■■■□□ 2.92
U2AF1-206ENST00000464750 FANCIQ9NVI1 1328 aa33.29■■■□□ 2.92
U2AF1-206ENST00000464750 IRS4O14654 1257 aaPredicted RBP33.29■■■□□ 2.92
U2AF1-206ENST00000464750 PPIP5K2O43314 1243 aa33.29■■■□□ 2.92
U2AF1-206ENST00000464750 POTEIP0CG38 1075 aa33.29■■■□□ 2.92
U2AF1-206ENST00000464750 POTEJP0CG39 1038 aa33.29■■■□□ 2.92
U2AF1-206ENST00000464750 EIF6P56537 245 aaKnown RBP33.29■■■□□ 2.92
U2AF1-206ENST00000464750 SF3B3Q15393 1217 aaKnown RBP33.29■■■□□ 2.92
U2AF1-206ENST00000464750 TAF1DQ9H5J8 278 aaPredicted RBP33.29■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms