RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 EFCC1Q9HA90 598 aa11.07□□□□□ -0.64
PTCD3-205ENST00000464541 FAM13AO94988 1023 aa11.06□□□□□ -0.64
PTCD3-205ENST00000464541 ABL1P00519 1130 aa11.06□□□□□ -0.64
PTCD3-205ENST00000464541 BMP4P12644 408 aa11.06□□□□□ -0.64
PTCD3-205ENST00000464541 ALKBH2Q6NS38 261 aa11.06□□□□□ -0.64
PTCD3-205ENST00000464541 AVENQ9NQS1 362 aaPredicted RBP11.06□□□□□ -0.64
PTCD3-205ENST00000464541 ICMTO60725 284 aa11.05□□□□□ -0.64
PTCD3-205ENST00000464541 SLURP2P0DP57 97 aa11.05□□□□□ -0.64
PTCD3-205ENST00000464541 CD33P20138 364 aa11.05□□□□□ -0.64
PTCD3-205ENST00000464541 CTBSQ01459 385 aa11.05□□□□□ -0.64
PTCD3-205ENST00000464541 STRN4Q9NRL3 753 aa11.05□□□□□ -0.64
PTCD3-205ENST00000464541 HCN2Q9UL51 889 aa11.05□□□□□ -0.64
PTCD3-205ENST00000464541 IGF1RP08069 1367 aa11.04□□□□□ -0.64
PTCD3-205ENST00000464541 OPLAHO14841 1288 aa11.04□□□□□ -0.64
PTCD3-205ENST00000464541 SERPINB4P48594 390 aa11.04□□□□□ -0.64
PTCD3-205ENST00000464541 SFSWAPQ12872 951 aaKnown RBP11.04□□□□□ -0.64
PTCD3-205ENST00000464541 NOM1Q5C9Z4 860 aaKnown RBP11.04□□□□□ -0.64
PTCD3-205ENST00000464541 ZAP70P43403 619 aa11.03□□□□□ -0.64
PTCD3-205ENST00000464541 NEUROD1Q13562 356 aa11.03□□□□□ -0.64
PTCD3-205ENST00000464541 ADAMTS2O95450 1211 aa11.02□□□□□ -0.65
PTCD3-205ENST00000464541 ARAFP10398 606 aa11.02□□□□□ -0.65
PTCD3-205ENST00000464541 ZNF211Q13398 564 aaPredicted RBP11.02□□□□□ -0.65
PTCD3-205ENST00000464541 FAM26DQ5JW98 314 aa11.02□□□□□ -0.65
PTCD3-205ENST00000464541 PIK3R5Q8WYR1 880 aa11.02□□□□□ -0.65
PTCD3-205ENST00000464541 RTCBQ9Y3I0 505 aaKnown RBP11.02□□□□□ -0.65
PTCD3-205ENST00000464541 C2CD2LO14523 706 aa11.01□□□□□ -0.65
PTCD3-205ENST00000464541 MPSTP25325 297 aa11.01□□□□□ -0.65
PTCD3-205ENST00000464541 SPEM2Q0P670 501 aa11.01□□□□□ -0.65
PTCD3-205ENST00000464541 ZNF468Q5VIY5 522 aaPredicted RBP11.01□□□□□ -0.65
PTCD3-205ENST00000464541 GLYCTKQ8IVS8 523 aa11.01□□□□□ -0.65
PTCD3-205ENST00000464541 LRRC4BQ9NT99 713 aa11.01□□□□□ -0.65
PTCD3-205ENST00000464541 GDF2Q9UK05 429 aaPredicted RBP11.01□□□□□ -0.65
PTCD3-205ENST00000464541 PRR12Q9ULL5 1215 aa11.01□□□□□ -0.65
PTCD3-205ENST00000464541 ZBTB39O15060 712 aa11□□□□□ -0.65
PTCD3-205ENST00000464541 EGFRP00533 1210 aa11□□□□□ -0.65
PTCD3-205ENST00000464541 RPLP1P05386 114 aaKnown RBP11□□□□□ -0.65
PTCD3-205ENST00000464541 EIF1AXP47813 144 aaKnown RBP11□□□□□ -0.65
PTCD3-205ENST00000464541 INSM1Q01101 510 aaPredicted RBP11□□□□□ -0.65
PTCD3-205ENST00000464541 MTMR3Q13615 1198 aa11□□□□□ -0.65
PTCD3-205ENST00000464541 H3BRB1 525 aa10.99□□□□□ -0.65
PTCD3-205ENST00000464541 GRNP28799 593 aaKnown RBP10.99□□□□□ -0.65
PTCD3-205ENST00000464541 CCINQ13939 588 aa10.99□□□□□ -0.65
PTCD3-205ENST00000464541 GOLGA6L1Q8N7Z2 621 aa10.99□□□□□ -0.65
PTCD3-205ENST00000464541 TUT1Q9H6E5 874 aaKnown RBP10.99□□□□□ -0.65
PTCD3-205ENST00000464541 SOWAHDA6NJG2 315 aa10.98□□□□□ -0.65
PTCD3-205ENST00000464541 PCSK2P16519 638 aa10.98□□□□□ -0.65
PTCD3-205ENST00000464541 ADH6P28332 368 aa10.98□□□□□ -0.65
PTCD3-205ENST00000464541 RGL4Q8IZJ4 473 aa10.98□□□□□ -0.65
PTCD3-205ENST00000464541 OXCT2Q9BYC2 517 aaPredicted RBP10.98□□□□□ -0.65
PTCD3-205ENST00000464541 GSX2Q9BZM3 304 aa10.98□□□□□ -0.65
PTCD3-205ENST00000464541 ANO2Q9NQ90 1003 aa10.98□□□□□ -0.65
PTCD3-205ENST00000464541 FNDC3AQ9Y2H6 1198 aaKnown RBP10.98□□□□□ -0.65
PTCD3-205ENST00000464541 IVNS1ABPQ9Y6Y0 642 aa10.98□□□□□ -0.65
PTCD3-205ENST00000464541 MZF1P28698 734 aaPredicted RBP10.97□□□□□ -0.65
PTCD3-205ENST00000464541 SLC30A3Q99726 388 aa10.97□□□□□ -0.65
PTCD3-205ENST00000464541 SIN3BO75182 1162 aa10.96□□□□□ -0.65
PTCD3-205ENST00000464541 SLCO4C1Q6ZQN7 724 aa10.96□□□□□ -0.65
PTCD3-205ENST00000464541 GPR152Q8TDT2 470 aa10.96□□□□□ -0.65
PTCD3-205ENST00000464541 KCNMB2Q9Y691 235 aa10.96□□□□□ -0.65
PTCD3-205ENST00000464541 XYLBO75191 536 aa10.95□□□□□ -0.66
PTCD3-205ENST00000464541 USP5P45974 858 aa10.95□□□□□ -0.66
PTCD3-205ENST00000464541 AEBP1Q8IUX7 1158 aa10.95□□□□□ -0.66
PTCD3-205ENST00000464541 CMTR1Q8N1G2 835 aaKnown RBP10.95□□□□□ -0.66
PTCD3-205ENST00000464541 ACDQ96AP0 544 aa10.95□□□□□ -0.66
PTCD3-205ENST00000464541 PNMA5Q96PV4 448 aa10.95□□□□□ -0.66
PTCD3-205ENST00000464541 MAP3K6O95382 1288 aa10.94□□□□□ -0.66
PTCD3-205ENST00000464541 GRIN2CQ14957 1233 aa10.94□□□□□ -0.66
PTCD3-205ENST00000464541 ECM1Q16610 540 aa10.94□□□□□ -0.66
PTCD3-205ENST00000464541 SYT9Q86SS6 491 aa10.94□□□□□ -0.66
PTCD3-205ENST00000464541 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.94□□□□□ -0.66
PTCD3-205ENST00000464541 BCRP11274 1271 aa10.93□□□□□ -0.66
PTCD3-205ENST00000464541 ARHGAP4P98171 946 aa10.93□□□□□ -0.66
PTCD3-205ENST00000464541 AAMPQ13685 434 aa10.93□□□□□ -0.66
PTCD3-205ENST00000464541 ATCAYQ86WG3 371 aa10.93□□□□□ -0.66
PTCD3-205ENST00000464541 ZSCAN1Q8NBB4 408 aa10.93□□□□□ -0.66
PTCD3-205ENST00000464541 EDEM1Q92611 657 aa10.93□□□□□ -0.66
PTCD3-205ENST00000464541 GGA1Q9UJY5 639 aa10.93□□□□□ -0.66
PTCD3-205ENST00000464541 UBAP1LF5GYI3 381 aa10.92□□□□□ -0.66
PTCD3-205ENST00000464541 FZD6O60353 706 aa10.92□□□□□ -0.66
PTCD3-205ENST00000464541 PDGFAP04085 211 aa10.92□□□□□ -0.66
PTCD3-205ENST00000464541 DNM1Q05193 864 aaKnown RBP10.92□□□□□ -0.66
PTCD3-205ENST00000464541 TTC16Q8NEE8 873 aa10.92□□□□□ -0.66
PTCD3-205ENST00000464541 TNFRSF25Q93038 417 aa10.92□□□□□ -0.66
PTCD3-205ENST00000464541 BHMTQ93088 406 aa10.92□□□□□ -0.66
PTCD3-205ENST00000464541 NUDT16Q96DE0 195 aaKnown RBP10.92□□□□□ -0.66
PTCD3-205ENST00000464541 USP20Q9Y2K6 914 aa10.92□□□□□ -0.66
PTCD3-205ENST00000464541 ADARB2-AS1A8MUL3 147 aa10.91□□□□□ -0.66
PTCD3-205ENST00000464541 OIP5O43482 229 aa10.91□□□□□ -0.66
PTCD3-205ENST00000464541 CELA2BP08218 269 aaPredicted RBP10.91□□□□□ -0.66
PTCD3-205ENST00000464541 PCBP4P57723 403 aaKnown RBP10.91□□□□□ -0.66
PTCD3-205ENST00000464541 MAP3K10Q02779 954 aa10.91□□□□□ -0.66
PTCD3-205ENST00000464541 EHHADHQ08426 723 aa10.91□□□□□ -0.66
PTCD3-205ENST00000464541 TRIP4Q15650 581 aaPredicted RBP10.91□□□□□ -0.66
PTCD3-205ENST00000464541 ZNF385CQ66K41 422 aaPredicted RBP10.91□□□□□ -0.66
PTCD3-205ENST00000464541 PDE12Q6L8Q7 609 aaKnown RBP10.91□□□□□ -0.66
PTCD3-205ENST00000464541 NLRP13Q86W25 1043 aa10.91□□□□□ -0.66
PTCD3-205ENST00000464541 CITED4Q96RK1 184 aa10.91□□□□□ -0.66
PTCD3-205ENST00000464541 KLF15Q9UIH9 416 aa10.91□□□□□ -0.66
PTCD3-205ENST00000464541 NEURL1BA8MQ27 555 aa10.9□□□□□ -0.66
PTCD3-205ENST00000464541 NDUFB5O43674 189 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms