RNA–Protein interactions for RNA: ENST00000464518.1

SLC13A3-208, Transcript of solute carrier family 13 member 3, humanhuman

TSL 5

Gene SLC13A3, Length 792 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-208ENST00000464518 JDP2Q8WYK2 163 aa16.97■□□□□ 0.31
SLC13A3-208ENST00000464518 DDX21Q9NR30 783 aaKnown RBP eCLIP16.97■□□□□ 0.31
SLC13A3-208ENST00000464518 PCDH10Q9P2E7 1040 aa16.97■□□□□ 0.31
SLC13A3-208ENST00000464518 RIC1Q4ADV7 1423 aa16.96■□□□□ 0.31
SLC13A3-208ENST00000464518 SNRPA1P09661 255 aaKnown RBP16.96■□□□□ 0.31
SLC13A3-208ENST00000464518 FAM161AQ3B820 660 aa16.96■□□□□ 0.31
SLC13A3-208ENST00000464518 MAP1SQ66K74 1059 aaPredicted RBP16.96■□□□□ 0.31
SLC13A3-208ENST00000464518 BEGAINQ9BUH8 593 aa16.96■□□□□ 0.31
SLC13A3-208ENST00000464518 USP16Q9Y5T5 823 aa16.96■□□□□ 0.31
SLC13A3-208ENST00000464518 LMOD1P29536 600 aaPredicted RBP16.95■□□□□ 0.3
SLC13A3-208ENST00000464518 EIF6P56537 245 aaKnown RBP16.95■□□□□ 0.3
SLC13A3-208ENST00000464518 CRY2Q49AN0 593 aa16.95■□□□□ 0.3
SLC13A3-208ENST00000464518 SYNE4Q8N205 404 aa16.95■□□□□ 0.3
SLC13A3-208ENST00000464518 ABT1Q9ULW3 272 aaKnown RBP16.95■□□□□ 0.3
SLC13A3-208ENST00000464518 NIP7Q9Y221 180 aaKnown RBP eCLIP16.95■□□□□ 0.3
SLC13A3-208ENST00000464518 USP50Q70EL3 339 aaPredicted RBP16.94■□□□□ 0.3
SLC13A3-208ENST00000464518 IBTKQ9P2D0 1353 aaPredicted RBP16.93■□□□□ 0.3
SLC13A3-208ENST00000464518 U2SURPO15042 1029 aaKnown RBP16.93■□□□□ 0.3
SLC13A3-208ENST00000464518 CA12O43570 354 aa16.93■□□□□ 0.3
SLC13A3-208ENST00000464518 MLLT1Q03111 559 aaPredicted RBP16.93■□□□□ 0.3
SLC13A3-208ENST00000464518 NYXQ9GZU5 481 aa16.93■□□□□ 0.3
SLC13A3-208ENST00000464518 KIF7Q2M1P5 1343 aa16.93■□□□□ 0.3
SLC13A3-208ENST00000464518 LTBP1Q14766 1721 aa16.93■□□□□ 0.3
SLC13A3-208ENST00000464518 TRPM7Q96QT4 1865 aa16.93■□□□□ 0.3
SLC13A3-208ENST00000464518 MAP2K2P36507 400 aa16.92■□□□□ 0.3
SLC13A3-208ENST00000464518 MKRN4PQ13434 485 aaPredicted RBP16.92■□□□□ 0.3
SLC13A3-208ENST00000464518 CAPNS2Q96L46 248 aa16.92■□□□□ 0.3
SLC13A3-208ENST00000464518 LAMB4A4D0S4 1761 aa16.92■□□□□ 0.3
SLC13A3-208ENST00000464518 KCNQ3O43525 872 aa16.91■□□□□ 0.3
SLC13A3-208ENST00000464518 HHIPL1Q96JK4 782 aa16.91■□□□□ 0.3
SLC13A3-208ENST00000464518 VPS33BQ9H267 617 aa16.91■□□□□ 0.3
SLC13A3-208ENST00000464518 TLL2Q9Y6L7 1015 aa16.91■□□□□ 0.3
SLC13A3-208ENST00000464518 HTATSF1O43719 755 aaKnown RBP16.9■□□□□ 0.3
SLC13A3-208ENST00000464518 GTF2E1P29083 439 aaPredicted RBP16.9■□□□□ 0.3
SLC13A3-208ENST00000464518 HOXA10P31260 410 aaPredicted RBP16.9■□□□□ 0.3
SLC13A3-208ENST00000464518 SCNN1DP51172 638 aa16.9■□□□□ 0.3
SLC13A3-208ENST00000464518 CC2D1BQ5T0F9 858 aaKnown RBP16.9■□□□□ 0.3
SLC13A3-208ENST00000464518 RTF1Q92541 710 aaKnown RBP16.9■□□□□ 0.3
SLC13A3-208ENST00000464518 GPR101Q96P66 508 aaPredicted RBP16.9■□□□□ 0.3
SLC13A3-208ENST00000464518 ERVV-1B6SEH8 477 aa16.89■□□□□ 0.29
SLC13A3-208ENST00000464518 OLFM4Q6UX06 510 aa16.89■□□□□ 0.29
SLC13A3-208ENST00000464518 RSPH6AQ9H0K4 717 aa16.89■□□□□ 0.29
SLC13A3-208ENST00000464518 NBPF26B4DH59 902 aa16.88■□□□□ 0.29
SLC13A3-208ENST00000464518 PRKAR2BP31323 418 aa16.88■□□□□ 0.29
SLC13A3-208ENST00000464518 PIP4K2AP48426 406 aaPredicted RBP16.88■□□□□ 0.29
SLC13A3-208ENST00000464518 NBPF10Q6P3W6 841 aaKnown RBP16.88■□□□□ 0.29
SLC13A3-208ENST00000464518 NBPF15Q8N660 670 aa16.88■□□□□ 0.29
SLC13A3-208ENST00000464518 CDHR2Q9BYE9 1310 aa16.88■□□□□ 0.29
SLC13A3-208ENST00000464518 COL4A5P29400 1685 aa16.88■□□□□ 0.29
SLC13A3-208ENST00000464518 PRAMEF22A3QJZ6 481 aa16.87■□□□□ 0.29
SLC13A3-208ENST00000464518 RPGRQ92834 1020 aaKnown RBP16.87■□□□□ 0.29
SLC13A3-208ENST00000464518 PHACTR3Q96KR7 559 aa16.87■□□□□ 0.29
SLC13A3-208ENST00000464518 CRAMP1Q96RY5 1269 aa16.87■□□□□ 0.29
SLC13A3-208ENST00000464518 CCDC85CA6NKD9 419 aa16.86■□□□□ 0.29
SLC13A3-208ENST00000464518 CST9Q5W186 159 aa16.86■□□□□ 0.29
SLC13A3-208ENST00000464518 CYP4F22Q6NT55 531 aa16.86■□□□□ 0.29
SLC13A3-208ENST00000464518 LARGE2Q8N3Y3 721 aa16.86■□□□□ 0.29
SLC13A3-208ENST00000464518 CFAP53Q96M91 514 aa16.86■□□□□ 0.29
SLC13A3-208ENST00000464518 ADARB2Q9NS39 739 aaKnown RBP16.86■□□□□ 0.29
SLC13A3-208ENST00000464518 NUDCQ9Y266 331 aa16.86■□□□□ 0.29
SLC13A3-208ENST00000464518 GJA3Q9Y6H8 435 aa16.86■□□□□ 0.29
SLC13A3-208ENST00000464518 ABCC12Q96J65 1359 aa16.86■□□□□ 0.29
SLC13A3-208ENST00000464518 EPS15P42566 896 aa16.85■□□□□ 0.29
SLC13A3-208ENST00000464518 FXR2P51116 673 aaKnown RBP eCLIP16.85■□□□□ 0.29
SLC13A3-208ENST00000464518 BRPF1P55201 1214 aaPredicted RBP16.85■□□□□ 0.29
SLC13A3-208ENST00000464518 HLFQ16534 295 aa16.85■□□□□ 0.29
SLC13A3-208ENST00000464518 PAXIP1Q6ZW49 1069 aaPredicted RBP16.85■□□□□ 0.29
SLC13A3-208ENST00000464518 NIM1KQ8IY84 436 aa16.85■□□□□ 0.29
SLC13A3-208ENST00000464518 NUP98P52948 1817 aa16.84■□□□□ 0.29
SLC13A3-208ENST00000464518 SAPCD2Q86UD0 394 aa16.84■□□□□ 0.29
SLC13A3-208ENST00000464518 RBM17Q96I25 401 aaKnown RBP16.84■□□□□ 0.29
SLC13A3-208ENST00000464518 GPRC5DQ9NZD1 345 aa16.84■□□□□ 0.29
SLC13A3-208ENST00000464518 MAP3K15Q6ZN16 1313 aa16.84■□□□□ 0.29
SLC13A3-208ENST00000464518 FAM177BA6PVY3 158 aa16.83■□□□□ 0.28
SLC13A3-208ENST00000464518 TAF7Q15545 349 aaPredicted RBP16.83■□□□□ 0.28
SLC13A3-208ENST00000464518 ZC3H15Q8WU90 426 aaKnown RBP16.83■□□□□ 0.28
SLC13A3-208ENST00000464518 TMX4Q9H1E5 349 aaPredicted RBP16.83■□□□□ 0.28
SLC13A3-208ENST00000464518 PGAP2Q9UHJ9 254 aa16.83■□□□□ 0.28
SLC13A3-208ENST00000464518 PPEF1O14829 653 aaPredicted RBP16.82■□□□□ 0.28
SLC13A3-208ENST00000464518 MCM10Q7L590 875 aa16.82■□□□□ 0.28
SLC13A3-208ENST00000464518 SUPT20HQ8NEM7 779 aa16.82■□□□□ 0.28
SLC13A3-208ENST00000464518 PNISRQ8TF01 805 aaKnown RBP16.82■□□□□ 0.28
SLC13A3-208ENST00000464518 KIF6Q6ZMV9 814 aa16.81■□□□□ 0.28
SLC13A3-208ENST00000464518 NUTM1Q86Y26 1132 aa16.81■□□□□ 0.28
SLC13A3-208ENST00000464518 KDM3BQ7LBC6 1761 aa16.81■□□□□ 0.28
SLC13A3-208ENST00000464518 ERBB4Q15303 1308 aa16.8■□□□□ 0.28
SLC13A3-208ENST00000464518 TRAF5O00463 557 aa16.8■□□□□ 0.28
SLC13A3-208ENST00000464518 PPIP5K2O43314 1243 aa16.8■□□□□ 0.28
SLC13A3-208ENST00000464518 RTFDC1Q9BY42 306 aaPredicted RBP16.8■□□□□ 0.28
SLC13A3-208ENST00000464518 MCOLN1Q9GZU1 580 aa16.8■□□□□ 0.28
SLC13A3-208ENST00000464518 UBN2Q6ZU65 1347 aa16.79■□□□□ 0.28
SLC13A3-208ENST00000464518 CELF2O95319 508 aaKnown RBP16.79■□□□□ 0.28
SLC13A3-208ENST00000464518 FMR1Q06787 632 aaKnown RBP eCLIP16.79■□□□□ 0.28
SLC13A3-208ENST00000464518 NOGQ13253 232 aa16.79■□□□□ 0.28
SLC13A3-208ENST00000464518 GRM1Q13255 1194 aa16.79■□□□□ 0.28
SLC13A3-208ENST00000464518 PARP10Q53GL7 1025 aa16.79■□□□□ 0.28
SLC13A3-208ENST00000464518 PPP1R42Q7Z4L9 355 aa16.79■□□□□ 0.28
SLC13A3-208ENST00000464518 ZNRF3Q9ULT6 936 aa16.79■□□□□ 0.28
SLC13A3-208ENST00000464518 ATP6V0A2Q9Y487 856 aa16.79■□□□□ 0.28
SLC13A3-208ENST00000464518 AOC2O75106 756 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms