RNA–Protein interactions for RNA: ENST00000464395.1

PITRM1-209, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 1 (best)

Gene PITRM1, Length 3,240 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-209ENST00000464395 CPA1P15085 419 aa13.24□□□□□ -0.29
PITRM1-209ENST00000464395 PTPN12Q05209 780 aaKnown RBP13.24□□□□□ -0.29
PITRM1-209ENST00000464395 AACSQ86V21 672 aa13.24□□□□□ -0.29
PITRM1-209ENST00000464395 KLHDC4Q8TBB5 520 aa13.24□□□□□ -0.29
PITRM1-209ENST00000464395 CABLES1Q8TDN4 633 aa13.24□□□□□ -0.29
PITRM1-209ENST00000464395 DDX58O95786 925 aaKnown RBP13.24□□□□□ -0.29
PITRM1-209ENST00000464395 TATP17735 454 aaPredicted RBP13.24□□□□□ -0.29
PITRM1-209ENST00000464395 NASPP49321 788 aaPredicted RBP13.24□□□□□ -0.29
PITRM1-209ENST00000464395 CCDC173Q0VFZ6 552 aa13.24□□□□□ -0.29
PITRM1-209ENST00000464395 VPS53Q5VIR6 699 aa13.24□□□□□ -0.29
PITRM1-209ENST00000464395 LMOD2Q6P5Q4 547 aa13.24□□□□□ -0.29
PITRM1-209ENST00000464395 LRSAM1Q6UWE0 723 aa13.24□□□□□ -0.29
PITRM1-209ENST00000464395 FAM227BQ96M60 508 aa13.24□□□□□ -0.29
PITRM1-209ENST00000464395 GADD45BO75293 160 aaPredicted RBP13.24□□□□□ -0.29
PITRM1-209ENST00000464395 ALDH8A1Q9H2A2 487 aaPredicted RBP13.24□□□□□ -0.29
PITRM1-209ENST00000464395 LIMCH1Q9UPQ0 1083 aa13.24□□□□□ -0.29
PITRM1-209ENST00000464395 HDAC5Q9UQL6 1122 aa13.24□□□□□ -0.29
PITRM1-209ENST00000464395 AIMP1Q12904 312 aaKnown RBP13.23□□□□□ -0.29
PITRM1-209ENST00000464395 RAPGEF4Q8WZA2 1011 aa13.23□□□□□ -0.29
PITRM1-209ENST00000464395 TAF6LQ9Y6J9 622 aa13.23□□□□□ -0.29
PITRM1-209ENST00000464395 COL5A2P05997 1499 aaPredicted RBP13.23□□□□□ -0.29
PITRM1-209ENST00000464395 A0A0D9SFI3 127 aa13.23□□□□□ -0.29
PITRM1-209ENST00000464395 ESPNB1AK53 854 aa13.23□□□□□ -0.29
PITRM1-209ENST00000464395 NMIQ13287 307 aaPredicted RBP13.23□□□□□ -0.29
PITRM1-209ENST00000464395 NOL8Q76FK4 1167 aaKnown RBP13.23□□□□□ -0.29
PITRM1-209ENST00000464395 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.23□□□□□ -0.29
PITRM1-209ENST00000464395 NBPF26B4DH59 902 aa13.22□□□□□ -0.29
PITRM1-209ENST00000464395 SNRPA1P09661 255 aaKnown RBP13.22□□□□□ -0.29
PITRM1-209ENST00000464395 TSGA10IPQ3SY00 556 aa13.22□□□□□ -0.29
PITRM1-209ENST00000464395 NBPF14Q5TI25 921 aa13.22□□□□□ -0.29
PITRM1-209ENST00000464395 NBPF10Q6P3W6 841 aaKnown RBP13.22□□□□□ -0.29
PITRM1-209ENST00000464395 NBPF15Q8N660 670 aa13.22□□□□□ -0.29
PITRM1-209ENST00000464395 NLRP2Q9NX02 1062 aa13.22□□□□□ -0.29
PITRM1-209ENST00000464395 SPEF2Q9C093 1822 aa13.22□□□□□ -0.29
PITRM1-209ENST00000464395 NHSL1Q5SYE7 1610 aa13.22□□□□□ -0.29
PITRM1-209ENST00000464395 USPL1Q5W0Q7 1092 aa13.22□□□□□ -0.29
PITRM1-209ENST00000464395 CCDC8Q9H0W5 538 aaPredicted RBP13.22□□□□□ -0.29
PITRM1-209ENST00000464395 IFIT2P09913 472 aaKnown RBP13.22□□□□□ -0.29
PITRM1-209ENST00000464395 MYL6BP14649 208 aa13.22□□□□□ -0.29
PITRM1-209ENST00000464395 FOXD4L5Q5VV16 416 aaPredicted RBP13.22□□□□□ -0.29
PITRM1-209ENST00000464395 ANKRD13DQ6ZTN6 518 aa13.22□□□□□ -0.29
PITRM1-209ENST00000464395 FOXD4L4Q8WXT5 416 aaPredicted RBP13.22□□□□□ -0.29
PITRM1-209ENST00000464395 MYD88Q99836 296 aa13.22□□□□□ -0.29
PITRM1-209ENST00000464395 WDR33Q9C0J8 1336 aaKnown RBP13.22□□□□□ -0.29
PITRM1-209ENST00000464395 RFX7Q2KHR2 1363 aa13.22□□□□□ -0.29
PITRM1-209ENST00000464395 NWD2Q9ULI1 1742 aa13.21□□□□□ -0.29
PITRM1-209ENST00000464395 CREB3L3Q68CJ9 461 aa13.21□□□□□ -0.29
PITRM1-209ENST00000464395 USP48Q86UV5 1035 aa13.21□□□□□ -0.29
PITRM1-209ENST00000464395 ITGB4P16144 1822 aa13.21□□□□□ -0.29
PITRM1-209ENST00000464395 CASTP20810 708 aaKnown RBP13.21□□□□□ -0.29
PITRM1-209ENST00000464395 SYT1P21579 422 aa13.21□□□□□ -0.29
PITRM1-209ENST00000464395 FOXO4P98177 505 aa13.21□□□□□ -0.29
PITRM1-209ENST00000464395 NKX1-1Q15270 411 aaPredicted RBP13.21□□□□□ -0.29
PITRM1-209ENST00000464395 CHRNA2Q15822 529 aa13.21□□□□□ -0.29
PITRM1-209ENST00000464395 PRPF40BQ6NWY9 871 aaKnown RBP13.21□□□□□ -0.29
PITRM1-209ENST00000464395 RIC3Q7Z5B4 369 aa13.21□□□□□ -0.29
PITRM1-209ENST00000464395 DBNLQ9UJU6 430 aaKnown RBP13.21□□□□□ -0.29
PITRM1-209ENST00000464395 MBD3O95983 291 aa13.2□□□□□ -0.3
PITRM1-209ENST00000464395 LARP6Q9BRS8 491 aaKnown RBP13.2□□□□□ -0.3
PITRM1-209ENST00000464395 RBM8AQ9Y5S9 174 aaKnown RBP13.2□□□□□ -0.3
PITRM1-209ENST00000464395 SLC27A2O14975 620 aa13.2□□□□□ -0.3
PITRM1-209ENST00000464395 ZSCAN22P10073 491 aaPredicted RBP13.2□□□□□ -0.3
PITRM1-209ENST00000464395 PIP4K2AP48426 406 aaPredicted RBP13.2□□□□□ -0.3
PITRM1-209ENST00000464395 OS9Q13438 667 aaPredicted RBP13.2□□□□□ -0.3
PITRM1-209ENST00000464395 ME3Q16798 604 aa13.2□□□□□ -0.3
PITRM1-209ENST00000464395 ZNF589Q86UQ0 364 aaPredicted RBP13.2□□□□□ -0.3
PITRM1-209ENST00000464395 RUFY2Q8WXA3 655 aa13.2□□□□□ -0.3
PITRM1-209ENST00000464395 DIAPH3Q9NSV4 1193 aa13.2□□□□□ -0.3
PITRM1-209ENST00000464395 ZNF609O15014 1411 aa13.2□□□□□ -0.3
PITRM1-209ENST00000464395 H7C1W4 665 aa13.2□□□□□ -0.3
PITRM1-209ENST00000464395 ATF3P18847 181 aa13.2□□□□□ -0.3
PITRM1-209ENST00000464395 ATP5JP18859 108 aa13.2□□□□□ -0.3
PITRM1-209ENST00000464395 SYCE3A1L190 88 aa13.19□□□□□ -0.3
PITRM1-209ENST00000464395 G3BP1Q13283 466 aaKnown RBP eCLIP13.19□□□□□ -0.3
PITRM1-209ENST00000464395 FMNL2Q96PY5 1086 aa13.19□□□□□ -0.3
PITRM1-209ENST00000464395 MTMR6Q9Y217 621 aa13.19□□□□□ -0.3
PITRM1-209ENST00000464395 TNNI3KQ59H18 835 aa13.19□□□□□ -0.3
PITRM1-209ENST00000464395 GPATCH3Q96I76 525 aa13.19□□□□□ -0.3
PITRM1-209ENST00000464395 TPCN1Q9ULQ1 816 aa13.19□□□□□ -0.3
PITRM1-209ENST00000464395 FPGT-TNNI3KV9GXZ4 949 aa13.19□□□□□ -0.3
PITRM1-209ENST00000464395 PLBD2Q8NHP8 589 aa13.18□□□□□ -0.3
PITRM1-209ENST00000464395 SOS2Q07890 1332 aaPredicted RBP13.18□□□□□ -0.3
PITRM1-209ENST00000464395 STX6O43752 255 aa13.18□□□□□ -0.3
PITRM1-209ENST00000464395 TAF5LO75529 589 aa13.18□□□□□ -0.3
PITRM1-209ENST00000464395 F13A1P00488 732 aa13.18□□□□□ -0.3
PITRM1-209ENST00000464395 TOB2Q14106 344 aaPredicted RBP13.18□□□□□ -0.3
PITRM1-209ENST00000464395 BRINP3Q76B58 766 aa13.18□□□□□ -0.3
PITRM1-209ENST00000464395 ATG9AQ7Z3C6 839 aa13.18□□□□□ -0.3
PITRM1-209ENST00000464395 JAKMIP1Q96N16 626 aaKnown RBP13.18□□□□□ -0.3
PITRM1-209ENST00000464395 PDRG1Q9NUG6 133 aa13.18□□□□□ -0.3
PITRM1-209ENST00000464395 WDR17Q8IZU2 1322 aa13.18□□□□□ -0.3
PITRM1-209ENST00000464395 WNK3Q9BYP7 1800 aa13.18□□□□□ -0.3
PITRM1-209ENST00000464395 HIP1O00291 1037 aa13.18□□□□□ -0.3
PITRM1-209ENST00000464395 HS1BP3Q53T59 392 aa13.18□□□□□ -0.3
PITRM1-209ENST00000464395 KIAA1211Q6ZU35 1233 aa13.18□□□□□ -0.3
PITRM1-209ENST00000464395 CADPS2Q86UW7 1296 aa13.18□□□□□ -0.3
PITRM1-209ENST00000464395 JARID2Q92833 1246 aaPredicted RBP13.18□□□□□ -0.3
PITRM1-209ENST00000464395 EDC3Q96F86 508 aaKnown RBP13.18□□□□□ -0.3
PITRM1-209ENST00000464395 SIL1Q9H173 461 aa13.18□□□□□ -0.3
PITRM1-209ENST00000464395 BOLA2Q9H3K6 86 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms