RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 INTS4Q96HW7 963 aaKnown RBP8.72□□□□□ -1.01
CLSTN1-204ENST00000464286 CCDC94Q9BW85 323 aaPredicted RBP8.72□□□□□ -1.01
CLSTN1-204ENST00000464286 DIAPH3Q9NSV4 1193 aa8.72□□□□□ -1.01
CLSTN1-204ENST00000464286 FAM13BQ9NYF5 915 aa8.72□□□□□ -1.01
CLSTN1-204ENST00000464286 TRAK1Q9UPV9 953 aa8.72□□□□□ -1.01
CLSTN1-204ENST00000464286 TNNQ9UQP3 1299 aa8.72□□□□□ -1.01
CLSTN1-204ENST00000464286 CD109Q6YHK3 1445 aa8.71□□□□□ -1.01
CLSTN1-204ENST00000464286 TULP4Q9NRJ4 1543 aa8.71□□□□□ -1.01
CLSTN1-204ENST00000464286 GOLGA6L6A8MZA4 724 aa8.71□□□□□ -1.02
CLSTN1-204ENST00000464286 ERC2O15083 957 aa8.71□□□□□ -1.02
CLSTN1-204ENST00000464286 MMP16P51512 607 aa8.71□□□□□ -1.02
CLSTN1-204ENST00000464286 USB1Q9BQ65 265 aaKnown RBP8.71□□□□□ -1.02
CLSTN1-204ENST00000464286 DCTPP1Q9H773 170 aa8.71□□□□□ -1.02
CLSTN1-204ENST00000464286 ATP6V1DQ9Y5K8 247 aa8.71□□□□□ -1.02
CLSTN1-204ENST00000464286 SSH2Q76I76 1423 aa8.71□□□□□ -1.02
CLSTN1-204ENST00000464286 PIK3C2BO00750 1634 aa8.7□□□□□ -1.02
CLSTN1-204ENST00000464286 CAMSAP1Q5T5Y3 1602 aa8.7□□□□□ -1.02
CLSTN1-204ENST00000464286 NFE2L2Q16236 605 aa8.7□□□□□ -1.02
CLSTN1-204ENST00000464286 DNTTIP2Q5QJE6 756 aaKnown RBP8.7□□□□□ -1.02
CLSTN1-204ENST00000464286 NUTM1Q86Y26 1132 aa8.7□□□□□ -1.02
CLSTN1-204ENST00000464286 MYRIPQ8NFW9 859 aa8.7□□□□□ -1.02
CLSTN1-204ENST00000464286 USP26Q9BXU7 913 aa8.7□□□□□ -1.02
CLSTN1-204ENST00000464286 CPSF1Q10570 1443 aaKnown RBP8.7□□□□□ -1.02
CLSTN1-204ENST00000464286 FAM135BQ49AJ0 1406 aa8.7□□□□□ -1.02
CLSTN1-204ENST00000464286 PRPF40AO75400 957 aaKnown RBP8.69□□□□□ -1.02
CLSTN1-204ENST00000464286 KIF20AO95235 890 aa8.69□□□□□ -1.02
CLSTN1-204ENST00000464286 TTLL12Q14166 644 aaPredicted RBP8.69□□□□□ -1.02
CLSTN1-204ENST00000464286 PDCL2Q8N4E4 241 aa8.69□□□□□ -1.02
CLSTN1-204ENST00000464286 RBSNQ9H1K0 784 aa8.69□□□□□ -1.02
CLSTN1-204ENST00000464286 PTPRCP08575 1304 aa8.69□□□□□ -1.02
CLSTN1-204ENST00000464286 WDR33Q9C0J8 1336 aaKnown RBP8.69□□□□□ -1.02
CLSTN1-204ENST00000464286 UGGT1Q9NYU2 1555 aa8.69□□□□□ -1.02
CLSTN1-204ENST00000464286 TNFRSF10AO00220 468 aa8.68□□□□□ -1.02
CLSTN1-204ENST00000464286 TRIM66O15016 1216 aa8.68□□□□□ -1.02
CLSTN1-204ENST00000464286 GTF2F1P35269 517 aaKnown RBP eCLIP8.68□□□□□ -1.02
CLSTN1-204ENST00000464286 CYB5RLQ6IPT4 315 aa8.68□□□□□ -1.02
CLSTN1-204ENST00000464286 GIGYF2Q6Y7W6 1299 aaKnown RBP8.68□□□□□ -1.02
CLSTN1-204ENST00000464286 PLEKHM2Q8IWE5 1019 aa8.68□□□□□ -1.02
CLSTN1-204ENST00000464286 AFAP1Q8N556 730 aa8.68□□□□□ -1.02
CLSTN1-204ENST00000464286 ANKRD44Q8N8A2 993 aa8.68□□□□□ -1.02
CLSTN1-204ENST00000464286 SPIRE2Q8WWL2 714 aa8.68□□□□□ -1.02
CLSTN1-204ENST00000464286 SYMPKQ92797 1274 aaKnown RBP8.68□□□□□ -1.02
CLSTN1-204ENST00000464286 PKD2L1Q9P0L9 805 aa8.68□□□□□ -1.02
CLSTN1-204ENST00000464286 A0A1W2PP64 1363 aa8.68□□□□□ -1.02
CLSTN1-204ENST00000464286 ATP7BP35670 1465 aa8.68□□□□□ -1.02
CLSTN1-204ENST00000464286 NEXMIFQ5QGS0 1516 aa8.68□□□□□ -1.02
CLSTN1-204ENST00000464286 LRRC7Q96NW7 1537 aa8.68□□□□□ -1.02
CLSTN1-204ENST00000464286 KIDINS220Q9ULH0 1771 aa8.68□□□□□ -1.02
CLSTN1-204ENST00000464286 VAMP4O75379 141 aa8.67□□□□□ -1.02
CLSTN1-204ENST00000464286 DXOO77932 396 aaKnown RBP8.67□□□□□ -1.02
CLSTN1-204ENST00000464286 CD2BP2O95400 341 aaKnown RBP8.67□□□□□ -1.02
CLSTN1-204ENST00000464286 SRPK2P78362 688 aaKnown RBP8.67□□□□□ -1.02
CLSTN1-204ENST00000464286 PIBF1Q8WXW3 757 aa8.67□□□□□ -1.02
CLSTN1-204ENST00000464286 SRCIN1Q9C0H9 1055 aa8.67□□□□□ -1.02
CLSTN1-204ENST00000464286 KIF3AQ9Y496 699 aa8.67□□□□□ -1.02
CLSTN1-204ENST00000464286 ERCC6L2Q5T890 1561 aa8.66□□□□□ -1.02
CLSTN1-204ENST00000464286 ABCC3O15438 1527 aa8.66□□□□□ -1.02
CLSTN1-204ENST00000464286 CDK12Q9NYV4 1490 aaPredicted RBP8.66□□□□□ -1.02
CLSTN1-204ENST00000464286 MLH3Q9UHC1 1453 aa8.66□□□□□ -1.02
CLSTN1-204ENST00000464286 XPCQ01831 940 aaPredicted RBP8.66□□□□□ -1.02
CLSTN1-204ENST00000464286 DMTNQ08495 405 aa8.66□□□□□ -1.02
CLSTN1-204ENST00000464286 TWISTNBQ3B726 338 aaPredicted RBP8.66□□□□□ -1.02
CLSTN1-204ENST00000464286 CCDC183Q5T5S1 534 aa8.66□□□□□ -1.02
CLSTN1-204ENST00000464286 AK7Q96M32 723 aa8.66□□□□□ -1.02
CLSTN1-204ENST00000464286 OSBPL3Q9H4L5 887 aa8.66□□□□□ -1.02
CLSTN1-204ENST00000464286 SLC52A1Q9NWF4 448 aa8.66□□□□□ -1.02
CLSTN1-204ENST00000464286 USP25Q9UHP3 1055 aa8.66□□□□□ -1.02
CLSTN1-204ENST00000464286 PCDHGC3Q9UN70 934 aa8.66□□□□□ -1.02
CLSTN1-204ENST00000464286 NPATQ14207 1427 aa8.65□□□□□ -1.02
CLSTN1-204ENST00000464286 KIAA0232Q92628 1395 aa8.65□□□□□ -1.02
CLSTN1-204ENST00000464286 AOX1Q06278 1338 aa8.65□□□□□ -1.02
CLSTN1-204ENST00000464286 SYCE3A1L190 88 aa8.65□□□□□ -1.02
CLSTN1-204ENST00000464286 DGAT1O75907 488 aa8.65□□□□□ -1.02
CLSTN1-204ENST00000464286 BRD1O95696 1058 aa8.65□□□□□ -1.02
CLSTN1-204ENST00000464286 ZNF853P0CG23 659 aa8.65□□□□□ -1.02
CLSTN1-204ENST00000464286 FAM193AP78312 1265 aa8.65□□□□□ -1.02
CLSTN1-204ENST00000464286 RBM10P98175 930 aaKnown RBP8.65□□□□□ -1.02
CLSTN1-204ENST00000464286 FOXC1Q12948 553 aa8.65□□□□□ -1.02
CLSTN1-204ENST00000464286 CUL4AQ13619 759 aa8.65□□□□□ -1.02
CLSTN1-204ENST00000464286 SYCP1Q15431 976 aa8.65□□□□□ -1.02
CLSTN1-204ENST00000464286 PARP9Q8IXQ6 854 aa8.65□□□□□ -1.02
CLSTN1-204ENST00000464286 TMEM87AQ8NBN3 555 aa8.65□□□□□ -1.02
CLSTN1-204ENST00000464286 IL17RAQ96F46 866 aa8.65□□□□□ -1.02
CLSTN1-204ENST00000464286 FEZ1Q99689 392 aa8.65□□□□□ -1.02
CLSTN1-204ENST00000464286 AK9Q5TCS8 1911 aa8.64□□□□□ -1.03
CLSTN1-204ENST00000464286 AATKQ6ZMQ8 1374 aa8.64□□□□□ -1.03
CLSTN1-204ENST00000464286 FYB1O15117 783 aa8.64□□□□□ -1.03
CLSTN1-204ENST00000464286 ZBTB24O43167 697 aaPredicted RBP8.64□□□□□ -1.03
CLSTN1-204ENST00000464286 FDX1P10109 184 aa8.64□□□□□ -1.03
CLSTN1-204ENST00000464286 NDUFV2P19404 249 aa8.64□□□□□ -1.03
CLSTN1-204ENST00000464286 PRKAR2BP31323 418 aa8.64□□□□□ -1.03
CLSTN1-204ENST00000464286 CCT4P50991 539 aaKnown RBP8.64□□□□□ -1.03
CLSTN1-204ENST00000464286 GPT2Q8TD30 523 aa8.64□□□□□ -1.03
CLSTN1-204ENST00000464286 CHMP4AQ9BY43 222 aa8.64□□□□□ -1.03
CLSTN1-204ENST00000464286 SPTLC3Q9NUV7 552 aa8.64□□□□□ -1.03
CLSTN1-204ENST00000464286 DLC1Q96QB1 1528 aa8.64□□□□□ -1.03
CLSTN1-204ENST00000464286 SOS1Q07889 1333 aaPredicted RBP8.63□□□□□ -1.03
CLSTN1-204ENST00000464286 MOXD2PA6NHM9 499 aa8.63□□□□□ -1.03
CLSTN1-204ENST00000464286 GSPT1P15170 499 aaKnown RBP8.63□□□□□ -1.03
CLSTN1-204ENST00000464286 NOLC1Q14978 699 aaKnown RBP eCLIP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms