RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 BCORQ6W2J9 1755 aa26.87■■□□□ 1.89
CD58-204ENST00000464088 TWISTNBQ3B726 338 aaPredicted RBP26.87■■□□□ 1.89
CD58-204ENST00000464088 NECTIN2Q92692 538 aa26.87■■□□□ 1.89
CD58-204ENST00000464088 PROSER3Q2NL68 480 aa26.86■■□□□ 1.89
CD58-204ENST00000464088 STYK1Q6J9G0 422 aa26.86■■□□□ 1.89
CD58-204ENST00000464088 CNKSR1Q969H4 720 aa26.86■■□□□ 1.89
CD58-204ENST00000464088 ZNF330Q9Y3S2 320 aaPredicted RBP26.86■■□□□ 1.89
CD58-204ENST00000464088 SOGA3Q5TF21 947 aa26.85■■□□□ 1.89
CD58-204ENST00000464088 L3MBTL3Q96JM7 780 aaPredicted RBP26.85■■□□□ 1.89
CD58-204ENST00000464088 DDX21Q9NR30 783 aaKnown RBP eCLIP26.85■■□□□ 1.89
CD58-204ENST00000464088 CHPF2Q9P2E5 772 aa26.85■■□□□ 1.89
CD58-204ENST00000464088 ZBED9Q6R2W3 1325 aa26.85■■□□□ 1.89
CD58-204ENST00000464088 IQCA1LA6NCM1 817 aa26.84■■□□□ 1.89
CD58-204ENST00000464088 VAMP4O75379 141 aa26.84■■□□□ 1.89
CD58-204ENST00000464088 ANXA1P04083 346 aa26.84■■□□□ 1.89
CD58-204ENST00000464088 MYL6BP14649 208 aa26.84■■□□□ 1.89
CD58-204ENST00000464088 LDHDQ86WU2 507 aa26.84■■□□□ 1.89
CD58-204ENST00000464088 CCDC24Q8N4L8 307 aa26.84■■□□□ 1.89
CD58-204ENST00000464088 TBC1D2BQ9UPU7 963 aa26.84■■□□□ 1.89
CD58-204ENST00000464088 SRGNP10124 158 aa26.83■■□□□ 1.89
CD58-204ENST00000464088 DZIP3Q86Y13 1208 aaKnown RBP26.83■■□□□ 1.89
CD58-204ENST00000464088 CAMTA2O94983 1202 aa26.82■■□□□ 1.88
CD58-204ENST00000464088 PRPF40BQ6NWY9 871 aaKnown RBP26.82■■□□□ 1.88
CD58-204ENST00000464088 DBF4Q9UBU7 674 aaPredicted RBP26.82■■□□□ 1.88
CD58-204ENST00000464088 CNBD1Q8NA66 436 aa26.81■■□□□ 1.88
CD58-204ENST00000464088 MASTLQ96GX5 879 aa26.81■■□□□ 1.88
CD58-204ENST00000464088 SETDB2Q96T68 719 aa26.81■■□□□ 1.88
CD58-204ENST00000464088 TAF1DQ9H5J8 278 aaPredicted RBP26.81■■□□□ 1.88
CD58-204ENST00000464088 ITGBL1O95965 494 aaPredicted RBP26.8■■□□□ 1.88
CD58-204ENST00000464088 CTCFP49711 727 aaPredicted RBP26.8■■□□□ 1.88
CD58-204ENST00000464088 CCDC30Q5VVM6 783 aa26.8■■□□□ 1.88
CD58-204ENST00000464088 NPM2Q86SE8 214 aaKnown RBP26.8■■□□□ 1.88
CD58-204ENST00000464088 CHMP4AQ9BY43 222 aa26.8■■□□□ 1.88
CD58-204ENST00000464088 ADAMTSL1Q8N6G6 1762 aa26.79■■□□□ 1.88
CD58-204ENST00000464088 CACNA1FO60840 1977 aa26.79■■□□□ 1.88
CD58-204ENST00000464088 VEGFBP49765 207 aa26.79■■□□□ 1.88
CD58-204ENST00000464088 TTLL7Q6ZT98 887 aa26.79■■□□□ 1.88
CD58-204ENST00000464088 C7orf43Q8WVR3 580 aa26.79■■□□□ 1.88
CD58-204ENST00000464088 TMEM88BA6NKF7 163 aa26.78■■□□□ 1.88
CD58-204ENST00000464088 ST5P78524 1137 aa26.78■■□□□ 1.88
CD58-204ENST00000464088 RGL2O15211 777 aa26.77■■□□□ 1.88
CD58-204ENST00000464088 AIDAQ96BJ3 306 aa26.77■■□□□ 1.88
CD58-204ENST00000464088 HYPKQ9NX55 129 aa26.77■■□□□ 1.88
CD58-204ENST00000464088 WBP1LQ9NX94 342 aa26.77■■□□□ 1.88
CD58-204ENST00000464088 NUP98P52948 1817 aa26.76■■□□□ 1.88
CD58-204ENST00000464088 MAP3K15Q6ZN16 1313 aa26.76■■□□□ 1.87
CD58-204ENST00000464088 XAGE3Q8WTP9 111 aa26.76■■□□□ 1.87
CD58-204ENST00000464088 COPS6Q7L5N1 327 aa26.75■■□□□ 1.87
CD58-204ENST00000464088 ERVV-1B6SEH8 477 aa26.74■■□□□ 1.87
CD58-204ENST00000464088 TCERG1O14776 1098 aaKnown RBP26.74■■□□□ 1.87
CD58-204ENST00000464088 NPHP1O15259 732 aa26.74■■□□□ 1.87
CD58-204ENST00000464088 HLFQ16534 295 aa26.73■■□□□ 1.87
CD58-204ENST00000464088 CCDC93Q567U6 631 aa26.73■■□□□ 1.87
CD58-204ENST00000464088 CLEC4GQ6UXB4 293 aa26.73■■□□□ 1.87
CD58-204ENST00000464088 PHAXQ9H814 394 aaKnown RBP26.73■■□□□ 1.87
CD58-204ENST00000464088 KLRG2A4D1S0 409 aaPredicted RBP26.72■■□□□ 1.87
CD58-204ENST00000464088 KIF6Q6ZMV9 814 aa26.72■■□□□ 1.87
CD58-204ENST00000464088 STK31Q9BXU1 1019 aa26.72■■□□□ 1.87
CD58-204ENST00000464088 RASSF10A6NK89 507 aa26.71■■□□□ 1.87
CD58-204ENST00000464088 FKBP4Q02790 459 aaKnown RBP eCLIP26.71■■□□□ 1.87
CD58-204ENST00000464088 AIMP1Q12904 312 aaKnown RBP26.71■■□□□ 1.87
CD58-204ENST00000464088 ZBTB3Q9H5J0 574 aa26.71■■□□□ 1.87
CD58-204ENST00000464088 HACL1Q9UJ83 578 aa26.71■■□□□ 1.87
CD58-204ENST00000464088 ZNF541Q9H0D2 1346 aa26.7■■□□□ 1.87
CD58-204ENST00000464088 LBX1P52954 281 aa26.7■■□□□ 1.86
CD58-204ENST00000464088 ZNF652Q9Y2D9 606 aa26.7■■□□□ 1.86
CD58-204ENST00000464088 SLC34A2O95436 690 aa26.69■■□□□ 1.86
CD58-204ENST00000464088 SLC4A2P04920 1241 aa26.69■■□□□ 1.86
CD58-204ENST00000464088 NPR1P16066 1061 aa26.69■■□□□ 1.86
CD58-204ENST00000464088 EAPPQ56P03 285 aaPredicted RBP26.69■■□□□ 1.86
CD58-204ENST00000464088 EPHX2P34913 555 aa26.68■■□□□ 1.86
CD58-204ENST00000464088 GIGYF2Q6Y7W6 1299 aaKnown RBP26.68■■□□□ 1.86
CD58-204ENST00000464088 G2E3Q7L622 706 aa26.68■■□□□ 1.86
CD58-204ENST00000464088 PNMA8AQ86V59 439 aaPredicted RBP26.68■■□□□ 1.86
CD58-204ENST00000464088 NBPF5PQ86XG9 351 aaPredicted RBP26.68■■□□□ 1.86
CD58-204ENST00000464088 ANKRD36CQ5JPF3 1778 aa26.67■■□□□ 1.86
CD58-204ENST00000464088 CT47B1P0C2W7 299 aaPredicted RBP26.67■■□□□ 1.86
CD58-204ENST00000464088 DEFB115Q30KQ5 88 aa26.67■■□□□ 1.86
CD58-204ENST00000464088 RTKN2Q8IZC4 609 aa26.67■■□□□ 1.86
CD58-204ENST00000464088 PLBD2Q8NHP8 589 aa26.67■■□□□ 1.86
CD58-204ENST00000464088 ZNF428Q96B54 188 aa26.67■■□□□ 1.86
CD58-204ENST00000464088 ZNF277Q9NRM2 450 aaPredicted RBP26.67■■□□□ 1.86
CD58-204ENST00000464088 FZD9O00144 591 aa26.66■■□□□ 1.86
CD58-204ENST00000464088 HSPA8P11142 646 aaKnown RBP26.66■■□□□ 1.86
CD58-204ENST00000464088 ANKRD13DQ6ZTN6 518 aa26.66■■□□□ 1.86
CD58-204ENST00000464088 CNTROBQ8N137 903 aa26.65■■□□□ 1.86
CD58-204ENST00000464088 CLEC11AQ9Y240 323 aa26.65■■□□□ 1.86
CD58-204ENST00000464088 ABHD8Q96I13 439 aa26.64■■□□□ 1.86
CD58-204ENST00000464088 MAP2K1Q02750 393 aaPredicted RBP26.63■■□□□ 1.85
CD58-204ENST00000464088 TPTE2Q6XPS3 522 aa26.63■■□□□ 1.85
CD58-204ENST00000464088 ZNF34Q8IZ26 560 aa26.63■■□□□ 1.85
CD58-204ENST00000464088 SSH1Q8WYL5 1049 aa26.63■■□□□ 1.85
CD58-204ENST00000464088 NIP7Q9Y221 180 aaKnown RBP eCLIP26.63■■□□□ 1.85
CD58-204ENST00000464088 WDR33Q9C0J8 1336 aaKnown RBP26.63■■□□□ 1.85
CD58-204ENST00000464088 THSD7BQ9C0I4 1608 aa26.62■■□□□ 1.85
CD58-204ENST00000464088 FLIIQ13045 1269 aa26.62■■□□□ 1.85
CD58-204ENST00000464088 MAP1SQ66K74 1059 aaPredicted RBP26.62■■□□□ 1.85
CD58-204ENST00000464088 OLFM4Q6UX06 510 aa26.62■■□□□ 1.85
CD58-204ENST00000464088 GPC2Q8N158 579 aa26.62■■□□□ 1.85
CD58-204ENST00000464088 MRPL50Q8N5N7 158 aaKnown RBP26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms