RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 SOCS7O14512 581 aa8.98□□□□□ -0.97
CD46-211ENST00000464082 SAMD5Q5TGI4 173 aa8.98□□□□□ -0.97
CD46-211ENST00000464082 IL27Q8NEV9 243 aa8.98□□□□□ -0.97
CD46-211ENST00000464082 ZDHHC3Q9NYG2 299 aa8.98□□□□□ -0.97
CD46-211ENST00000464082 ASXL2Q76L83 1435 aa8.97□□□□□ -0.97
CD46-211ENST00000464082 TRIM28Q13263 835 aaKnown RBP8.97□□□□□ -0.97
CD46-211ENST00000464082 CABP1Q9NZU7 370 aa8.97□□□□□ -0.97
CD46-211ENST00000464082 TTBK1Q5TCY1 1321 aaPredicted RBP8.97□□□□□ -0.97
CD46-211ENST00000464082 ADARB2-AS1A8MUL3 147 aa8.96□□□□□ -0.98
CD46-211ENST00000464082 TMEM229AB2RXF0 380 aa8.96□□□□□ -0.98
CD46-211ENST00000464082 CDK2AP1O14519 115 aa8.96□□□□□ -0.98
CD46-211ENST00000464082 ALBP02768 609 aa8.96□□□□□ -0.98
CD46-211ENST00000464082 TXLNAP40222 546 aa8.96□□□□□ -0.98
CD46-211ENST00000464082 LAMC2Q13753 1193 aa8.96□□□□□ -0.98
CD46-211ENST00000464082 BICDL1Q6ZP65 573 aa8.96□□□□□ -0.98
CD46-211ENST00000464082 MICALL1Q8N3F8 863 aa8.96□□□□□ -0.98
CD46-211ENST00000464082 SIRT1Q96EB6 747 aa8.96□□□□□ -0.98
CD46-211ENST00000464082 A6NJY4 79 aa8.95□□□□□ -0.98
CD46-211ENST00000464082 SIN3BO75182 1162 aa8.95□□□□□ -0.98
CD46-211ENST00000464082 NID1P14543 1247 aa8.95□□□□□ -0.98
CD46-211ENST00000464082 FAM69CQ0P6D2 419 aa8.95□□□□□ -0.98
CD46-211ENST00000464082 LRP8Q14114 963 aa8.95□□□□□ -0.98
CD46-211ENST00000464082 MTFR1Q15390 333 aa8.95□□□□□ -0.98
CD46-211ENST00000464082 SLC4A9Q96Q91 983 aa8.95□□□□□ -0.98
CD46-211ENST00000464082 NACC1Q96RE7 527 aa8.95□□□□□ -0.98
CD46-211ENST00000464082 SLC30A3Q99726 388 aa8.95□□□□□ -0.98
CD46-211ENST00000464082 PRDM6Q9NQX0 595 aa8.95□□□□□ -0.98
CD46-211ENST00000464082 EPRSP07814 1512 aaKnown RBP8.95□□□□□ -0.98
CD46-211ENST00000464082 RAPGEF6Q8TEU7 1601 aa8.94□□□□□ -0.98
CD46-211ENST00000464082 HYAL3O43820 417 aaPredicted RBP8.94□□□□□ -0.98
CD46-211ENST00000464082 EIF4G2P78344 907 aaKnown RBP eCLIP8.94□□□□□ -0.98
CD46-211ENST00000464082 TBC1D2BQ9UPU7 963 aa8.94□□□□□ -0.98
CD46-211ENST00000464082 CFAP43Q8NDM7 1665 aa8.94□□□□□ -0.98
CD46-211ENST00000464082 BTBD11A6QL63 1104 aa8.93□□□□□ -0.98
CD46-211ENST00000464082 SFSWAPQ12872 951 aaKnown RBP8.93□□□□□ -0.98
CD46-211ENST00000464082 LRRC69Q6ZNQ3 347 aa8.93□□□□□ -0.98
CD46-211ENST00000464082 KDM6BO15054 1643 aa8.93□□□□□ -0.98
CD46-211ENST00000464082 LRRIQ1Q96JM4 1722 aa8.92□□□□□ -0.98
CD46-211ENST00000464082 WDR7Q9Y4E6 1490 aa8.92□□□□□ -0.98
CD46-211ENST00000464082 H2AFB1P0C5Y9 115 aa8.92□□□□□ -0.98
CD46-211ENST00000464082 H2AFB2P0C5Z0 115 aa8.92□□□□□ -0.98
CD46-211ENST00000464082 IRF5Q13568 498 aa8.92□□□□□ -0.98
CD46-211ENST00000464082 FAM9AQ8IZU1 332 aaPredicted RBP8.92□□□□□ -0.98
CD46-211ENST00000464082 KRTAP4-8A0A0G2JLE6 195 aa8.91□□□□□ -0.98
CD46-211ENST00000464082 SELPP16109 830 aa8.91□□□□□ -0.98
CD46-211ENST00000464082 ADGRE1Q14246 886 aa8.91□□□□□ -0.98
CD46-211ENST00000464082 MBTPS1Q14703 1052 aa8.91□□□□□ -0.98
CD46-211ENST00000464082 ZDHHC1Q8WTX9 485 aa8.91□□□□□ -0.98
CD46-211ENST00000464082 TNFRSF25Q93038 417 aa8.91□□□□□ -0.98
CD46-211ENST00000464082 EFCAB5A4FU69 1503 aa8.9□□□□□ -0.98
CD46-211ENST00000464082 ATP10BO94823 1461 aa8.9□□□□□ -0.98
CD46-211ENST00000464082 FHOD3Q2V2M9 1422 aa8.9□□□□□ -0.98
CD46-211ENST00000464082 C20orf204Q6ZNR8 217 aa8.9□□□□□ -0.98
CD46-211ENST00000464082 RAB44Q7Z6P3 723 aaPredicted RBP8.9□□□□□ -0.98
CD46-211ENST00000464082 GOLGA2P5Q9HBQ8 144 aa8.9□□□□□ -0.98
CD46-211ENST00000464082 NUP153P49790 1475 aaKnown RBP8.89□□□□□ -0.99
CD46-211ENST00000464082 COL17A1Q9UMD9 1497 aaPredicted RBP8.89□□□□□ -0.99
CD46-211ENST00000464082 ADH7P40394 386 aa8.89□□□□□ -0.99
CD46-211ENST00000464082 TRAPPC3LQ5T215 181 aa8.89□□□□□ -0.99
CD46-211ENST00000464082 PLPP7Q8NBV4 271 aa8.89□□□□□ -0.99
CD46-211ENST00000464082 ABCA9Q8IUA7 1624 aa8.88□□□□□ -0.99
CD46-211ENST00000464082 C9orf172C9J069 976 aa8.88□□□□□ -0.99
CD46-211ENST00000464082 APBB1O00213 710 aa8.88□□□□□ -0.99
CD46-211ENST00000464082 SHISA2Q6UWI4 295 aa8.88□□□□□ -0.99
CD46-211ENST00000464082 C7orf43Q8WVR3 580 aa8.88□□□□□ -0.99
CD46-211ENST00000464082 ARHGAP35Q9NRY4 1499 aa8.88□□□□□ -0.99
CD46-211ENST00000464082 VAC14Q08AM6 782 aa8.87□□□□□ -0.99
CD46-211ENST00000464082 MAP7D1Q3KQU3 841 aa8.87□□□□□ -0.99
CD46-211ENST00000464082 L3MBTL2Q969R5 705 aa8.87□□□□□ -0.99
CD46-211ENST00000464082 PCDHGA11Q9Y5H2 935 aa8.87□□□□□ -0.99
CD46-211ENST00000464082 SPEM2Q0P670 501 aa8.86□□□□□ -0.99
CD46-211ENST00000464082 TXNRD3Q86VQ6 643 aa8.86□□□□□ -0.99
CD46-211ENST00000464082 TP53INP1Q96A56 240 aa8.86□□□□□ -0.99
CD46-211ENST00000464082 MAGI3Q5TCQ9 1506 aa8.85□□□□□ -0.99
CD46-211ENST00000464082 A0A0A0MRY4 1105 aa8.85□□□□□ -0.99
CD46-211ENST00000464082 EML1O00423 815 aa8.85□□□□□ -0.99
CD46-211ENST00000464082 ELNP15502 786 aa8.85□□□□□ -0.99
CD46-211ENST00000464082 SCHIP1Q9P0W5 487 aaPredicted RBP8.85□□□□□ -0.99
CD46-211ENST00000464082 NOS2P35228 1153 aa8.84□□□□□ -0.99
CD46-211ENST00000464082 LENG1Q96BZ8 264 aaPredicted RBP8.84□□□□□ -0.99
CD46-211ENST00000464082 LILRB5O75023 590 aa8.83□□□□□ -1
CD46-211ENST00000464082 TEAD4Q15561 434 aa8.83□□□□□ -1
CD46-211ENST00000464082 NEUROD2Q15784 382 aa8.83□□□□□ -1
CD46-211ENST00000464082 TBCELQ5QJ74 424 aa8.83□□□□□ -1
CD46-211ENST00000464082 SH3PXD2AQ5TCZ1 1133 aa8.83□□□□□ -1
CD46-211ENST00000464082 CDK13Q14004 1512 aaKnown RBP8.83□□□□□ -1
CD46-211ENST00000464082 TEX14Q8IWB6 1497 aa8.83□□□□□ -1
CD46-211ENST00000464082 ARID3CA6NKF2 412 aa8.82□□□□□ -1
CD46-211ENST00000464082 RANGAP1P46060 587 aaPredicted RBP8.82□□□□□ -1
CD46-211ENST00000464082 NRG1Q02297 640 aaPredicted RBP8.82□□□□□ -1
CD46-211ENST00000464082 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.82□□□□□ -1
CD46-211ENST00000464082 SSBP4Q9BWG4 385 aaPredicted RBP8.82□□□□□ -1
CD46-211ENST00000464082 NEUROD4Q9HD90 331 aa8.82□□□□□ -1
CD46-211ENST00000464082 TTC37Q6PGP7 1564 aa8.82□□□□□ -1
CD46-211ENST00000464082 CD109Q6YHK3 1445 aa8.81□□□□□ -1
CD46-211ENST00000464082 HECW1Q76N89 1606 aa8.81□□□□□ -1
CD46-211ENST00000464082 ZNF358Q9NW07 568 aa8.81□□□□□ -1
CD46-211ENST00000464082 ZNF232Q9UNY5 417 aa8.81□□□□□ -1
CD46-211ENST00000464082 FRMPD1Q5SYB0 1578 aa8.81□□□□□ -1
CD46-211ENST00000464082 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms