RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 COPS6Q7L5N1 327 aa26.8■■□□□ 1.88
PDLIM4-205ENST00000463615 HSP90AB3PQ58FF7 597 aa26.79■■□□□ 1.88
PDLIM4-205ENST00000463615 POTECB2RU33 542 aa26.78■■□□□ 1.88
PDLIM4-205ENST00000463615 APAF1O14727 1248 aa26.78■■□□□ 1.88
PDLIM4-205ENST00000463615 CC2D2BQ6DHV5 1058 aa26.78■■□□□ 1.88
PDLIM4-205ENST00000463615 XAGE3Q8WTP9 111 aa26.78■■□□□ 1.88
PDLIM4-205ENST00000463615 LAS1LQ9Y4W2 734 aaKnown RBP26.78■■□□□ 1.88
PDLIM4-205ENST00000463615 SMC1BQ8NDV3 1235 aa26.77■■□□□ 1.88
PDLIM4-205ENST00000463615 CRAMP1Q96RY5 1269 aa26.77■■□□□ 1.88
PDLIM4-205ENST00000463615 CALD1Q05682 793 aaKnown RBP26.76■■□□□ 1.87
PDLIM4-205ENST00000463615 GRIPAP1Q4V328 841 aa26.76■■□□□ 1.87
PDLIM4-205ENST00000463615 UTP14AQ9BVJ6 771 aaKnown RBP26.76■■□□□ 1.87
PDLIM4-205ENST00000463615 IFT57Q9NWB7 429 aa26.76■■□□□ 1.87
PDLIM4-205ENST00000463615 ANKRD36CQ5JPF3 1778 aa26.76■■□□□ 1.87
PDLIM4-205ENST00000463615 HDGFL1Q5TGJ6 251 aa26.75■■□□□ 1.87
PDLIM4-205ENST00000463615 NECTIN2Q92692 538 aa26.75■■□□□ 1.87
PDLIM4-205ENST00000463615 PSMD1Q99460 953 aa26.75■■□□□ 1.87
PDLIM4-205ENST00000463615 MBIPQ9NS73 344 aa26.75■■□□□ 1.87
PDLIM4-205ENST00000463615 CHPF2Q9P2E5 772 aa26.75■■□□□ 1.87
PDLIM4-205ENST00000463615 DBF4Q9UBU7 674 aaPredicted RBP26.75■■□□□ 1.87
PDLIM4-205ENST00000463615 TCIRG1Q13488 830 aa26.74■■□□□ 1.87
PDLIM4-205ENST00000463615 OLFM4Q6UX06 510 aa26.74■■□□□ 1.87
PDLIM4-205ENST00000463615 NLRP10Q86W26 655 aa26.74■■□□□ 1.87
PDLIM4-205ENST00000463615 RPGRQ92834 1020 aaKnown RBP26.74■■□□□ 1.87
PDLIM4-205ENST00000463615 GNAI1P63096 354 aa26.73■■□□□ 1.87
PDLIM4-205ENST00000463615 DUSP27Q5VZP5 1158 aa26.73■■□□□ 1.87
PDLIM4-205ENST00000463615 DNAJC5GQ8N7S2 189 aa26.73■■□□□ 1.87
PDLIM4-205ENST00000463615 RBM17Q96I25 401 aaKnown RBP26.73■■□□□ 1.87
PDLIM4-205ENST00000463615 NLRP3Q96P20 1036 aa26.73■■□□□ 1.87
PDLIM4-205ENST00000463615 AIMP1Q12904 312 aaKnown RBP26.72■■□□□ 1.87
PDLIM4-205ENST00000463615 PLBD2Q8NHP8 589 aa26.72■■□□□ 1.87
PDLIM4-205ENST00000463615 C3orf67Q6ZVT6 689 aa26.71■■□□□ 1.87
PDLIM4-205ENST00000463615 L3MBTL3Q96JM7 780 aaPredicted RBP26.71■■□□□ 1.87
PDLIM4-205ENST00000463615 ZNF277Q9NRM2 450 aaPredicted RBP26.71■■□□□ 1.87
PDLIM4-205ENST00000463615 SYNE4Q8N205 404 aa26.7■■□□□ 1.86
PDLIM4-205ENST00000463615 HYPKQ9NX55 129 aa26.7■■□□□ 1.86
PDLIM4-205ENST00000463615 DDNO94850 711 aaPredicted RBP26.69■■□□□ 1.86
PDLIM4-205ENST00000463615 IARSP41252 1262 aaKnown RBP26.69■■□□□ 1.86
PDLIM4-205ENST00000463615 CCDC184Q52MB2 194 aa26.68■■□□□ 1.86
PDLIM4-205ENST00000463615 ANKRD13DQ6ZTN6 518 aa26.68■■□□□ 1.86
PDLIM4-205ENST00000463615 FZD9O00144 591 aa26.67■■□□□ 1.86
PDLIM4-205ENST00000463615 CCDC27Q2M243 656 aa26.67■■□□□ 1.86
PDLIM4-205ENST00000463615 NCBP3Q53F19 620 aaKnown RBP26.67■■□□□ 1.86
PDLIM4-205ENST00000463615 ISCA1Q9BUE6 129 aa26.67■■□□□ 1.86
PDLIM4-205ENST00000463615 SH3TC1Q8TE82 1336 aa26.66■■□□□ 1.86
PDLIM4-205ENST00000463615 PPEF1O14829 653 aaPredicted RBP26.66■■□□□ 1.86
PDLIM4-205ENST00000463615 IQCA1LA6NCM1 817 aa26.65■■□□□ 1.86
PDLIM4-205ENST00000463615 TRIM28Q13263 835 aaKnown RBP26.65■■□□□ 1.86
PDLIM4-205ENST00000463615 TRMT112Q9UI30 125 aaKnown RBP26.65■■□□□ 1.86
PDLIM4-205ENST00000463615 SCN4AP35499 1836 aa26.65■■□□□ 1.86
PDLIM4-205ENST00000463615 ZNF316A6NFI3 1004 aaPredicted RBP26.64■■□□□ 1.86
PDLIM4-205ENST00000463615 CHMP4AQ9BY43 222 aa26.64■■□□□ 1.86
PDLIM4-205ENST00000463615 ATP6V0A2Q9Y487 856 aa26.64■■□□□ 1.86
PDLIM4-205ENST00000463615 BBOX1O75936 387 aa26.63■■□□□ 1.85
PDLIM4-205ENST00000463615 ABCC4O15439 1325 aa26.63■■□□□ 1.85
PDLIM4-205ENST00000463615 ZNF541Q9H0D2 1346 aa26.63■■□□□ 1.85
PDLIM4-205ENST00000463615 LAMB2P55268 1798 aa26.62■■□□□ 1.85
PDLIM4-205ENST00000463615 VPS33BQ9H267 617 aa26.62■■□□□ 1.85
PDLIM4-205ENST00000463615 HCLS1P14317 486 aaPredicted RBP26.61■■□□□ 1.85
PDLIM4-205ENST00000463615 JDP2Q8WYK2 163 aa26.61■■□□□ 1.85
PDLIM4-205ENST00000463615 C8orf58Q8NAV2 365 aa26.6■■□□□ 1.85
PDLIM4-205ENST00000463615 KLRG1Q96E93 195 aa26.6■■□□□ 1.85
PDLIM4-205ENST00000463615 RTFDC1Q9BY42 306 aaPredicted RBP26.6■■□□□ 1.85
PDLIM4-205ENST00000463615 TAF1DQ9H5J8 278 aaPredicted RBP26.6■■□□□ 1.85
PDLIM4-205ENST00000463615 COL4A5P29400 1685 aa26.6■■□□□ 1.85
PDLIM4-205ENST00000463615 CHADLQ6NUI6 762 aa26.59■■□□□ 1.85
PDLIM4-205ENST00000463615 SP8Q8IXZ3 490 aa26.59■■□□□ 1.85
PDLIM4-205ENST00000463615 GPC2Q8N158 579 aa26.59■■□□□ 1.85
PDLIM4-205ENST00000463615 TMX4Q9H1E5 349 aaPredicted RBP26.58■■□□□ 1.85
PDLIM4-205ENST00000463615 GRAPQ13588 217 aa26.57■■□□□ 1.84
PDLIM4-205ENST00000463615 SF3B3Q15393 1217 aaKnown RBP26.57■■□□□ 1.84
PDLIM4-205ENST00000463615 DDX46Q7L014 1031 aaKnown RBP26.57■■□□□ 1.84
PDLIM4-205ENST00000463615 TMC4Q7Z404 712 aa26.57■■□□□ 1.84
PDLIM4-205ENST00000463615 SLC51AQ86UW1 340 aa26.57■■□□□ 1.84
PDLIM4-205ENST00000463615 WWC1Q8IX03 1113 aa26.57■■□□□ 1.84
PDLIM4-205ENST00000463615 JMYQ8N9B5 988 aa26.57■■□□□ 1.84
PDLIM4-205ENST00000463615 GRAPLQ8TC17 118 aaPredicted RBP26.57■■□□□ 1.84
PDLIM4-205ENST00000463615 IL16Q14005 1332 aa26.57■■□□□ 1.84
PDLIM4-205ENST00000463615 DDX60Q8IY21 1712 aaKnown RBP26.56■■□□□ 1.84
PDLIM4-205ENST00000463615 ELL2O00472 640 aaPredicted RBP26.56■■□□□ 1.84
PDLIM4-205ENST00000463615 ANP32CO43423 234 aa26.56■■□□□ 1.84
PDLIM4-205ENST00000463615 HTRA3P83110 453 aa26.56■■□□□ 1.84
PDLIM4-205ENST00000463615 GOLGA2Q08379 1002 aa26.56■■□□□ 1.84
PDLIM4-205ENST00000463615 CCDC30Q5VVM6 783 aa26.56■■□□□ 1.84
PDLIM4-205ENST00000463615 LDHDQ86WU2 507 aa26.56■■□□□ 1.84
PDLIM4-205ENST00000463615 PHAXQ9H814 394 aaKnown RBP26.56■■□□□ 1.84
PDLIM4-205ENST00000463615 HACL1Q9UJ83 578 aa26.56■■□□□ 1.84
PDLIM4-205ENST00000463615 ATP5J2-PTCD1G3V325 749 aa26.55■■□□□ 1.84
PDLIM4-205ENST00000463615 POTEIP0CG38 1075 aa26.55■■□□□ 1.84
PDLIM4-205ENST00000463615 POTEJP0CG39 1038 aa26.55■■□□□ 1.84
PDLIM4-205ENST00000463615 LARGE2Q8N3Y3 721 aa26.55■■□□□ 1.84
PDLIM4-205ENST00000463615 SUPT20HQ8NEM7 779 aa26.55■■□□□ 1.84
PDLIM4-205ENST00000463615 EIF6P56537 245 aaKnown RBP26.54■■□□□ 1.84
PDLIM4-205ENST00000463615 RIC3Q7Z5B4 369 aa26.54■■□□□ 1.84
PDLIM4-205ENST00000463615 FAM89AQ96GI7 184 aa26.54■■□□□ 1.84
PDLIM4-205ENST00000463615 MRS2Q9HD23 443 aa26.54■■□□□ 1.84
PDLIM4-205ENST00000463615 TCERG1O14776 1098 aaKnown RBP26.53■■□□□ 1.84
PDLIM4-205ENST00000463615 TSPYL6Q8N831 410 aa26.53■■□□□ 1.84
PDLIM4-205ENST00000463615 ADAMTSL1Q8N6G6 1762 aa26.53■■□□□ 1.84
PDLIM4-205ENST00000463615 PNMA8AQ86V59 439 aaPredicted RBP26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms