RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 DDX21Q9NR30 783 aaKnown RBP eCLIP12.33□□□□□ -0.447e-6■■■■■ 43.5
PTPRD-207ENST00000463477 ZNF652Q9Y2D9 606 aa12.33□□□□□ -0.44
PTPRD-207ENST00000463477 INTS3Q68E01 1043 aaKnown RBP12.32□□□□□ -0.44
PTPRD-207ENST00000463477 BICDL1Q6ZP65 573 aa12.32□□□□□ -0.44
PTPRD-207ENST00000463477 PTPRCP08575 1304 aa12.32□□□□□ -0.44
PTPRD-207ENST00000463477 HLFQ16534 295 aa12.32□□□□□ -0.44
PTPRD-207ENST00000463477 HDGFL1Q5TGJ6 251 aa12.32□□□□□ -0.44
PTPRD-207ENST00000463477 TTLL7Q6ZT98 887 aa12.32□□□□□ -0.44
PTPRD-207ENST00000463477 CHD1LQ86WJ1 897 aa12.32□□□□□ -0.44
PTPRD-207ENST00000463477 DBF4Q9UBU7 674 aaPredicted RBP12.32□□□□□ -0.44
PTPRD-207ENST00000463477 C10orf71Q711Q0 1435 aa12.31□□□□□ -0.44
PTPRD-207ENST00000463477 MAP3K15Q6ZN16 1313 aa12.31□□□□□ -0.44
PTPRD-207ENST00000463477 GPR162Q16538 588 aa12.31□□□□□ -0.44
PTPRD-207ENST00000463477 PROSER3Q2NL68 480 aa12.31□□□□□ -0.44
PTPRD-207ENST00000463477 KIF6Q6ZMV9 814 aa12.31□□□□□ -0.44
PTPRD-207ENST00000463477 NECTIN2Q92692 538 aa12.31□□□□□ -0.44
PTPRD-207ENST00000463477 LAMB4A4D0S4 1761 aa12.31□□□□□ -0.44
PTPRD-207ENST00000463477 CARMIL3Q8ND23 1372 aa12.3□□□□□ -0.44
PTPRD-207ENST00000463477 A0A0G2JLW4 131 aa12.3□□□□□ -0.44
PTPRD-207ENST00000463477 ELL2O00472 640 aaPredicted RBP12.3□□□□□ -0.44
PTPRD-207ENST00000463477 BMP2KLQ5H9B9 411 aa12.3□□□□□ -0.44
PTPRD-207ENST00000463477 COPS6Q7L5N1 327 aa12.3□□□□□ -0.44
PTPRD-207ENST00000463477 GRIN3BO60391 1043 aa12.29□□□□□ -0.44
PTPRD-207ENST00000463477 ANXA1P04083 346 aa12.29□□□□□ -0.44
PTPRD-207ENST00000463477 KCNA3P22001 575 aa12.29□□□□□ -0.44
PTPRD-207ENST00000463477 GIGYF2Q6Y7W6 1299 aaKnown RBP12.29□□□□□ -0.44
PTPRD-207ENST00000463477 HYPKQ9NX55 129 aa12.29□□□□□ -0.44
PTPRD-207ENST00000463477 CHPF2Q9P2E5 772 aa12.29□□□□□ -0.44
PTPRD-207ENST00000463477 NIP7Q9Y221 180 aaKnown RBP eCLIP12.29□□□□□ -0.44
PTPRD-207ENST00000463477 DPEP1P16444 411 aa12.29□□□□□ -0.44
PTPRD-207ENST00000463477 NFKBIBQ15653 356 aa12.29□□□□□ -0.44
PTPRD-207ENST00000463477 PRR5LQ6MZQ0 368 aa12.29□□□□□ -0.44
PTPRD-207ENST00000463477 TPTE2Q6XPS3 522 aa12.29□□□□□ -0.44
PTPRD-207ENST00000463477 BRIP1Q9BX63 1249 aa12.29□□□□□ -0.44
PTPRD-207ENST00000463477 KIF13BQ9NQT8 1826 aa12.28□□□□□ -0.44
PTPRD-207ENST00000463477 EIF5BO60841 1220 aaKnown RBP12.28□□□□□ -0.44
PTPRD-207ENST00000463477 YBX3P16989 372 aaKnown RBP eCLIP12.28□□□□□ -0.44
PTPRD-207ENST00000463477 SLC4A3P48751 1232 aa12.28□□□□□ -0.44
PTPRD-207ENST00000463477 CCDC30Q5VVM6 783 aa12.28□□□□□ -0.44
PTPRD-207ENST00000463477 ZNF34Q8IZ26 560 aa12.28□□□□□ -0.44
PTPRD-207ENST00000463477 XAGE3Q8WTP9 111 aa12.28□□□□□ -0.44
PTPRD-207ENST00000463477 ZBTB3Q9H5J0 574 aa12.28□□□□□ -0.44
PTPRD-207ENST00000463477 PXDNLA1KZ92 1463 aa12.28□□□□□ -0.44
PTPRD-207ENST00000463477 ATP10DQ9P241 1426 aa12.27□□□□□ -0.44
PTPRD-207ENST00000463477 SCN7AQ01118 1682 aa12.27□□□□□ -0.44
PTPRD-207ENST00000463477 AIMP1Q12904 312 aaKnown RBP12.27□□□□□ -0.45
PTPRD-207ENST00000463477 ANKRD13DQ6ZTN6 518 aa12.27□□□□□ -0.45
PTPRD-207ENST00000463477 NBPF5PQ86XG9 351 aaPredicted RBP12.27□□□□□ -0.45
PTPRD-207ENST00000463477 SIRT2Q8IXJ6 389 aa12.27□□□□□ -0.45
PTPRD-207ENST00000463477 CNBD1Q8NA66 436 aa12.27□□□□□ -0.45
PTPRD-207ENST00000463477 PIM2Q9P1W9 311 aa12.27□□□□□ -0.45
PTPRD-207ENST00000463477 NRXN2Q9P2S2 1712 aa12.27□□□□□ -0.45
PTPRD-207ENST00000463477 PDE6BP35913 854 aa12.26□□□□□ -0.45
PTPRD-207ENST00000463477 RPAP2Q8IXW5 612 aaPredicted RBP12.26□□□□□ -0.45
PTPRD-207ENST00000463477 C22orf23Q9BZE7 217 aa12.26□□□□□ -0.45
PTPRD-207ENST00000463477 RBM25P49756 843 aaKnown RBP12.26□□□□□ -0.45
PTPRD-207ENST00000463477 ST5P78524 1137 aa12.26□□□□□ -0.45
PTPRD-207ENST00000463477 HSP90AB3PQ58FF7 597 aa12.26□□□□□ -0.45
PTPRD-207ENST00000463477 ANKRD44Q8N8A2 993 aa12.26□□□□□ -0.45
PTPRD-207ENST00000463477 PLBD2Q8NHP8 589 aa12.26□□□□□ -0.45
PTPRD-207ENST00000463477 LNPKQ9C0E8 428 aa12.26□□□□□ -0.45
PTPRD-207ENST00000463477 NYXQ9GZU5 481 aa12.26□□□□□ -0.45
PTPRD-207ENST00000463477 DCTPP1Q9H773 170 aa12.26□□□□□ -0.45
PTPRD-207ENST00000463477 BCORQ6W2J9 1755 aa12.25□□□□□ -0.45
PTPRD-207ENST00000463477 H0YIN7 160 aa12.25□□□□□ -0.45
PTPRD-207ENST00000463477 NPHP1O15259 732 aa12.25□□□□□ -0.45
PTPRD-207ENST00000463477 CHRNA5P30532 468 aa12.25□□□□□ -0.45
PTPRD-207ENST00000463477 TCIRG1Q13488 830 aa12.25□□□□□ -0.45
PTPRD-207ENST00000463477 PARP10Q53GL7 1025 aa12.25□□□□□ -0.45
PTPRD-207ENST00000463477 AFDNP55196 1824 aaKnown RBP12.25□□□□□ -0.45
PTPRD-207ENST00000463477 KLRG2A4D1S0 409 aaPredicted RBP12.24□□□□□ -0.45
PTPRD-207ENST00000463477 ANKRD45Q5TZF3 282 aa12.24□□□□□ -0.45
PTPRD-207ENST00000463477 CCDC24Q8N4L8 307 aa12.24□□□□□ -0.45
PTPRD-207ENST00000463477 ANTXR1Q9H6X2 564 aa12.24□□□□□ -0.45
PTPRD-207ENST00000463477 PHAXQ9H814 394 aaKnown RBP12.24□□□□□ -0.45
PTPRD-207ENST00000463477 BCS1LQ9Y276 419 aa12.24□□□□□ -0.45
PTPRD-207ENST00000463477 UBN2Q6ZU65 1347 aa12.24□□□□□ -0.45
PTPRD-207ENST00000463477 GPTP24298 496 aa12.23□□□□□ -0.45
PTPRD-207ENST00000463477 GTF2E1P29083 439 aaPredicted RBP12.23□□□□□ -0.45
PTPRD-207ENST00000463477 DALRD3Q5D0E6 543 aaKnown RBP12.23□□□□□ -0.45
PTPRD-207ENST00000463477 SUSD4Q5VX71 490 aa12.23□□□□□ -0.45
PTPRD-207ENST00000463477 PPP1R42Q7Z4L9 355 aa12.23□□□□□ -0.45
PTPRD-207ENST00000463477 C2CD5Q86YS7 1000 aa12.23□□□□□ -0.45
PTPRD-207ENST00000463477 STK31Q9BXU1 1019 aa12.23□□□□□ -0.45
PTPRD-207ENST00000463477 TBC1D2Q9BYX2 928 aa12.23□□□□□ -0.45
PTPRD-207ENST00000463477 WWC3Q9ULE0 1092 aa12.23□□□□□ -0.45
PTPRD-207ENST00000463477 NUP98P52948 1817 aa12.23□□□□□ -0.45
PTPRD-207ENST00000463477 KIAA1551Q9HCM1 1747 aa12.23□□□□□ -0.45
PTPRD-207ENST00000463477 IBTKQ9P2D0 1353 aaPredicted RBP12.23□□□□□ -0.45
PTPRD-207ENST00000463477 FAM177BA6PVY3 158 aa12.22□□□□□ -0.45
PTPRD-207ENST00000463477 SRGNP10124 158 aa12.22□□□□□ -0.45
PTPRD-207ENST00000463477 CCT4P50991 539 aaKnown RBP12.22□□□□□ -0.45
PTPRD-207ENST00000463477 TTLL6Q8N841 843 aa12.22□□□□□ -0.45
PTPRD-207ENST00000463477 C1orf115Q9H7X2 142 aa12.22□□□□□ -0.45
PTPRD-207ENST00000463477 SLC4A2P04920 1241 aa12.22□□□□□ -0.45
PTPRD-207ENST00000463477 TRIM28Q13263 835 aaKnown RBP12.22□□□□□ -0.45
PTPRD-207ENST00000463477 UTP14AQ9BVJ6 771 aaKnown RBP12.22□□□□□ -0.45
PTPRD-207ENST00000463477 NTSR2O95665 410 aa12.21□□□□□ -0.45
PTPRD-207ENST00000463477 DDX58O95786 925 aaKnown RBP12.21□□□□□ -0.45
PTPRD-207ENST00000463477 MFAP1P55081 439 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms