RNA–Protein interactions for RNA: ENST00000463209.1

TMEM254-208, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 407 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-208ENST00000463209 NLRP10Q86W26 655 aa11.14□□□□□ -0.63
TMEM254-208ENST00000463209 MASTLQ96GX5 879 aa11.14□□□□□ -0.63
TMEM254-208ENST00000463209 RNF181Q9P0P0 153 aa11.14□□□□□ -0.63
TMEM254-208ENST00000463209 COL4A1P02462 1669 aa11.14□□□□□ -0.63
TMEM254-208ENST00000463209 TAF1P21675 1872 aa11.13□□□□□ -0.63
TMEM254-208ENST00000463209 FER1L6Q2WGJ9 1857 aa11.13□□□□□ -0.63
TMEM254-208ENST00000463209 NFKBIEO00221 500 aa11.13□□□□□ -0.63
TMEM254-208ENST00000463209 RGL2O15211 777 aa11.13□□□□□ -0.63
TMEM254-208ENST00000463209 HCLS1P14317 486 aaPredicted RBP11.13□□□□□ -0.63
TMEM254-208ENST00000463209 EXOSC9Q06265 439 aaKnown RBP11.13□□□□□ -0.63
TMEM254-208ENST00000463209 TWISTNBQ3B726 338 aaPredicted RBP11.13□□□□□ -0.63
TMEM254-208ENST00000463209 STYK1Q6J9G0 422 aa11.13□□□□□ -0.63
TMEM254-208ENST00000463209 G2E3Q7L622 706 aa11.13□□□□□ -0.63
TMEM254-208ENST00000463209 PLBD2Q8NHP8 589 aa11.13□□□□□ -0.63
TMEM254-208ENST00000463209 JARID2Q92833 1246 aaPredicted RBP11.13□□□□□ -0.63
TMEM254-208ENST00000463209 UTP14AQ9BVJ6 771 aaKnown RBP11.13□□□□□ -0.63
TMEM254-208ENST00000463209 NYXQ9GZU5 481 aa11.13□□□□□ -0.63
TMEM254-208ENST00000463209 HYPKQ9NX55 129 aa11.13□□□□□ -0.63
TMEM254-208ENST00000463209 IBTKQ9P2D0 1353 aaPredicted RBP11.13□□□□□ -0.63
TMEM254-208ENST00000463209 IL16Q14005 1332 aa11.12□□□□□ -0.63
TMEM254-208ENST00000463209 NPR1P16066 1061 aa11.12□□□□□ -0.63
TMEM254-208ENST00000463209 TCIRG1Q13488 830 aa11.12□□□□□ -0.63
TMEM254-208ENST00000463209 ANKRD13DQ6ZTN6 518 aa11.12□□□□□ -0.63
TMEM254-208ENST00000463209 RIC3Q7Z5B4 369 aa11.12□□□□□ -0.63
TMEM254-208ENST00000463209 MIER1Q8N108 512 aa11.12□□□□□ -0.63
TMEM254-208ENST00000463209 MYD88Q99836 296 aa11.12□□□□□ -0.63
TMEM254-208ENST00000463209 GOLGA2Q08379 1002 aa11.11□□□□□ -0.63
TMEM254-208ENST00000463209 PARP10Q53GL7 1025 aa11.11□□□□□ -0.63
TMEM254-208ENST00000463209 CCDC30Q5VVM6 783 aa11.11□□□□□ -0.63
TMEM254-208ENST00000463209 DIEXFQ68CQ4 756 aaKnown RBP11.11□□□□□ -0.63
TMEM254-208ENST00000463209 PPP1R42Q7Z4L9 355 aa11.11□□□□□ -0.63
TMEM254-208ENST00000463209 WDR63Q8IWG1 891 aa11.11□□□□□ -0.63
TMEM254-208ENST00000463209 RPGRQ92834 1020 aaKnown RBP11.11□□□□□ -0.63
TMEM254-208ENST00000463209 CNKSR1Q969H4 720 aa11.11□□□□□ -0.63
TMEM254-208ENST00000463209 FAM89AQ96GI7 184 aa11.11□□□□□ -0.63
TMEM254-208ENST00000463209 TRMT112Q9UI30 125 aaKnown RBP11.11□□□□□ -0.63
TMEM254-208ENST00000463209 ZNF521Q96K83 1311 aa11.1□□□□□ -0.63
TMEM254-208ENST00000463209 KLRG2A4D1S0 409 aaPredicted RBP11.1□□□□□ -0.63
TMEM254-208ENST00000463209 CRY2Q49AN0 593 aa11.1□□□□□ -0.63
TMEM254-208ENST00000463209 HSP90AB3PQ58FF7 597 aa11.1□□□□□ -0.63
TMEM254-208ENST00000463209 ISCA1Q9BUE6 129 aa11.1□□□□□ -0.63
TMEM254-208ENST00000463209 GPBP1L1Q9HC44 474 aaPredicted RBP11.1□□□□□ -0.63
TMEM254-208ENST00000463209 MAP3K2Q9Y2U5 619 aa11.1□□□□□ -0.63
TMEM254-208ENST00000463209 RIC1Q4ADV7 1423 aa11.09□□□□□ -0.63
TMEM254-208ENST00000463209 VAMP4O75379 141 aa11.09□□□□□ -0.63
TMEM254-208ENST00000463209 SLC4A2P04920 1241 aa11.09□□□□□ -0.63
TMEM254-208ENST00000463209 C7orf43Q8WVR3 580 aa11.09□□□□□ -0.63
TMEM254-208ENST00000463209 STK31Q9BXU1 1019 aa11.09□□□□□ -0.63
TMEM254-208ENST00000463209 NMRK2Q9NPI5 230 aa11.09□□□□□ -0.63
TMEM254-208ENST00000463209 PDZRN3Q9UPQ7 1066 aa11.09□□□□□ -0.63
TMEM254-208ENST00000463209 ABCC4O15439 1325 aa11.09□□□□□ -0.63
TMEM254-208ENST00000463209 SH3TC1Q8TE82 1336 aa11.09□□□□□ -0.63
TMEM254-208ENST00000463209 PI4KAP2A4QPH2 592 aa11.08□□□□□ -0.64
TMEM254-208ENST00000463209 CCER2I3L3R5 266 aa11.08□□□□□ -0.64
TMEM254-208ENST00000463209 LMNB1P20700 586 aa11.08□□□□□ -0.64
TMEM254-208ENST00000463209 PI4KAP1Q8N8J0 262 aa11.08□□□□□ -0.64
TMEM254-208ENST00000463209 CDCA7LQ96GN5 454 aa11.08□□□□□ -0.64
TMEM254-208ENST00000463209 TAOK3Q9H2K8 898 aa11.08□□□□□ -0.64
TMEM254-208ENST00000463209 MYH16Q9H6N6 1097 aa11.08□□□□□ -0.64
TMEM254-208ENST00000463209 ZNF277Q9NRM2 450 aaPredicted RBP11.08□□□□□ -0.64
TMEM254-208ENST00000463209 COL4A5P29400 1685 aa11.08□□□□□ -0.64
TMEM254-208ENST00000463209 DICER1Q9UPY3 1922 aaKnown RBP11.07□□□□□ -0.64
TMEM254-208ENST00000463209 PPEF1O14829 653 aaPredicted RBP11.07□□□□□ -0.64
TMEM254-208ENST00000463209 CWF19L2Q2TBE0 894 aaKnown RBP11.07□□□□□ -0.64
TMEM254-208ENST00000463209 CCDC93Q567U6 631 aa11.07□□□□□ -0.64
TMEM254-208ENST00000463209 RBM17Q96I25 401 aaKnown RBP11.07□□□□□ -0.64
TMEM254-208ENST00000463209 NLRP3Q96P20 1036 aa11.07□□□□□ -0.64
TMEM254-208ENST00000463209 CCDC85AQ96PX6 553 aaPredicted RBP11.07□□□□□ -0.64
TMEM254-208ENST00000463209 SNED1Q8TER0 1413 aa11.07□□□□□ -0.64
TMEM254-208ENST00000463209 SPEF2Q9C093 1822 aa11.07□□□□□ -0.64
TMEM254-208ENST00000463209 IGKV5-2P06315 115 aa11.06□□□□□ -0.64
TMEM254-208ENST00000463209 HOXA10P31260 410 aaPredicted RBP11.06□□□□□ -0.64
TMEM254-208ENST00000463209 FLIIQ13045 1269 aa11.06□□□□□ -0.64
TMEM254-208ENST00000463209 SLC10A5Q5PT55 438 aa11.06□□□□□ -0.64
TMEM254-208ENST00000463209 KSR2Q6VAB6 950 aa11.06□□□□□ -0.64
TMEM254-208ENST00000463209 METTL22Q9BUU2 404 aaPredicted RBP11.06□□□□□ -0.64
TMEM254-208ENST00000463209 F6X3S4 739 aa11.05□□□□□ -0.64
TMEM254-208ENST00000463209 IRS4O14654 1257 aaPredicted RBP11.05□□□□□ -0.64
TMEM254-208ENST00000463209 KIF3CO14782 793 aa11.05□□□□□ -0.64
TMEM254-208ENST00000463209 DDX58O95786 925 aaKnown RBP11.05□□□□□ -0.64
TMEM254-208ENST00000463209 ALDH1B1P30837 517 aa11.05□□□□□ -0.64
TMEM254-208ENST00000463209 FKBP5Q13451 457 aaPredicted RBP11.05□□□□□ -0.64
TMEM254-208ENST00000463209 RNF123Q5XPI4 1314 aa11.05□□□□□ -0.64
TMEM254-208ENST00000463209 LRRC37AA6NMS7 1700 aa11.04□□□□□ -0.64
TMEM254-208ENST00000463209 C1QTNF8P60827 252 aa11.04□□□□□ -0.64
TMEM254-208ENST00000463209 FKBP4Q02790 459 aaKnown RBP eCLIP11.04□□□□□ -0.64
TMEM254-208ENST00000463209 CRAMP1Q96RY5 1269 aa11.04□□□□□ -0.64
TMEM254-208ENST00000463209 BCL2L13Q9BXK5 485 aa11.04□□□□□ -0.64
TMEM254-208ENST00000463209 RRAGCQ9HB90 399 aa11.04□□□□□ -0.64
TMEM254-208ENST00000463209 RNF216Q9NWF9 866 aaPredicted RBP11.04□□□□□ -0.64
TMEM254-208ENST00000463209 CWC25Q9NXE8 425 aaPredicted RBP11.04□□□□□ -0.64
TMEM254-208ENST00000463209 ZNF541Q9H0D2 1346 aa11.04□□□□□ -0.64
TMEM254-208ENST00000463209 LTBP3Q9NS15 1303 aa11.04□□□□□ -0.64
TMEM254-208ENST00000463209 DUOX1Q9NRD9 1551 aa11.03□□□□□ -0.64
TMEM254-208ENST00000463209 NEURL1BA8MQ27 555 aa11.03□□□□□ -0.64
TMEM254-208ENST00000463209 SLFN5Q08AF3 891 aa11.03□□□□□ -0.64
TMEM254-208ENST00000463209 SOGA3Q5TF21 947 aa11.03□□□□□ -0.64
TMEM254-208ENST00000463209 DDX46Q7L014 1031 aaKnown RBP11.03□□□□□ -0.64
TMEM254-208ENST00000463209 ZBTB38Q8NAP3 1195 aaPredicted RBP11.03□□□□□ -0.64
TMEM254-208ENST00000463209 CELF1Q92879 486 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms