RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 ERFEQ4G0M1 354 aa11.46□□□□□ -0.57
DDX39B-216ENST00000462421 ZNF853P0CG23 659 aa11.45□□□□□ -0.58
DDX39B-216ENST00000462421 RASSF7Q02833 373 aa11.45□□□□□ -0.58
DDX39B-216ENST00000462421 PROSER3Q2NL68 480 aa11.45□□□□□ -0.58
DDX39B-216ENST00000462421 SUSD4Q5VX71 490 aa11.45□□□□□ -0.58
DDX39B-216ENST00000462421 ZNF34Q8IZ26 560 aa11.45□□□□□ -0.58
DDX39B-216ENST00000462421 JDP2Q8WYK2 163 aa11.45□□□□□ -0.58
DDX39B-216ENST00000462421 TSR2Q969E8 191 aaKnown RBP11.45□□□□□ -0.58
DDX39B-216ENST00000462421 SENP3-EIF4A1A0A087X0R7 540 aa11.44□□□□□ -0.58
DDX39B-216ENST00000462421 PPEF1O14829 653 aaPredicted RBP11.44□□□□□ -0.58
DDX39B-216ENST00000462421 CCDC184Q52MB2 194 aa11.44□□□□□ -0.58
DDX39B-216ENST00000462421 IFFO2Q5TF58 517 aa11.44□□□□□ -0.58
DDX39B-216ENST00000462421 SUPT20HQ8NEM7 779 aa11.44□□□□□ -0.58
DDX39B-216ENST00000462421 NRXN2Q9P2S2 1712 aa11.43□□□□□ -0.58
DDX39B-216ENST00000462421 NTSR2O95665 410 aa11.43□□□□□ -0.58
DDX39B-216ENST00000462421 C1QTNF8P60827 252 aa11.43□□□□□ -0.58
DDX39B-216ENST00000462421 FKBP4Q02790 459 aaKnown RBP eCLIP11.43□□□□□ -0.58
DDX39B-216ENST00000462421 FKBP5Q13451 457 aaPredicted RBP11.43□□□□□ -0.58
DDX39B-216ENST00000462421 PDIA6Q15084 440 aa11.43□□□□□ -0.58
DDX39B-216ENST00000462421 TMC4Q7Z404 712 aa11.43□□□□□ -0.58
DDX39B-216ENST00000462421 NLRP10Q86W26 655 aa11.43□□□□□ -0.58
DDX39B-216ENST00000462421 MYD88Q99836 296 aa11.43□□□□□ -0.58
DDX39B-216ENST00000462421 UBN2Q6ZU65 1347 aa11.42□□□□□ -0.58
DDX39B-216ENST00000462421 FANCIQ9NVI1 1328 aa11.42□□□□□ -0.58
DDX39B-216ENST00000462421 ATP5J2-PTCD1G3V325 749 aa11.42□□□□□ -0.58
DDX39B-216ENST00000462421 CCER2I3L3R5 266 aa11.42□□□□□ -0.58
DDX39B-216ENST00000462421 C8orf58Q8NAV2 365 aa11.42□□□□□ -0.58
DDX39B-216ENST00000462421 CRAMP1Q96RY5 1269 aa11.42□□□□□ -0.58
DDX39B-216ENST00000462421 CWC25Q9NXE8 425 aaPredicted RBP11.42□□□□□ -0.58
DDX39B-216ENST00000462421 RIC1Q4ADV7 1423 aa11.42□□□□□ -0.58
DDX39B-216ENST00000462421 AFDNP55196 1824 aaKnown RBP11.42□□□□□ -0.58
DDX39B-216ENST00000462421 ADCY9O60503 1353 aa11.41□□□□□ -0.58
DDX39B-216ENST00000462421 LTBP3Q9NS15 1303 aa11.41□□□□□ -0.58
DDX39B-216ENST00000462421 G3V3G9 751 aa11.41□□□□□ -0.58
DDX39B-216ENST00000462421 TCERG1O14776 1098 aaKnown RBP11.41□□□□□ -0.58
DDX39B-216ENST00000462421 BBOX1O75936 387 aa11.41□□□□□ -0.58
DDX39B-216ENST00000462421 SLC4A2P04920 1241 aa11.41□□□□□ -0.58
DDX39B-216ENST00000462421 EIF6P56537 245 aaKnown RBP11.41□□□□□ -0.58
DDX39B-216ENST00000462421 DCAF8Q5TAQ9 597 aa11.41□□□□□ -0.58
DDX39B-216ENST00000462421 CCDC191Q8NCU4 936 aa11.41□□□□□ -0.58
DDX39B-216ENST00000462421 ABCC12Q96J65 1359 aa11.41□□□□□ -0.58
DDX39B-216ENST00000462421 KLRG2A4D1S0 409 aaPredicted RBP11.4□□□□□ -0.58
DDX39B-216ENST00000462421 IQCA1LA6NCM1 817 aa11.4□□□□□ -0.58
DDX39B-216ENST00000462421 E9PSI1 815 aa11.4□□□□□ -0.58
DDX39B-216ENST00000462421 IRS4O14654 1257 aaPredicted RBP11.4□□□□□ -0.58
DDX39B-216ENST00000462421 HCLS1P14317 486 aaPredicted RBP11.4□□□□□ -0.58
DDX39B-216ENST00000462421 LMOD1P29536 600 aaPredicted RBP11.4□□□□□ -0.58
DDX39B-216ENST00000462421 CCDC152Q4G0S7 254 aa11.4□□□□□ -0.58
DDX39B-216ENST00000462421 RTL5Q5HYW3 569 aaPredicted RBP11.4□□□□□ -0.58
DDX39B-216ENST00000462421 DPP8Q6V1X1 898 aaPredicted RBP11.4□□□□□ -0.58
DDX39B-216ENST00000462421 KSR2Q6VAB6 950 aa11.4□□□□□ -0.58
DDX39B-216ENST00000462421 NIM1KQ8IY84 436 aa11.4□□□□□ -0.58
DDX39B-216ENST00000462421 MAP3K2Q9Y2U5 619 aa11.4□□□□□ -0.58
DDX39B-216ENST00000462421 ARFGEF1Q9Y6D6 1849 aa11.39□□□□□ -0.59
DDX39B-216ENST00000462421 GLTPD2A6NH11 291 aa11.39□□□□□ -0.59
DDX39B-216ENST00000462421 NFKBIEO00221 500 aa11.39□□□□□ -0.59
DDX39B-216ENST00000462421 TOMM70O94826 608 aa11.39□□□□□ -0.59
DDX39B-216ENST00000462421 VEGFAP15692 232 aaPredicted RBP11.39□□□□□ -0.59
DDX39B-216ENST00000462421 IARSP41252 1262 aaKnown RBP11.39□□□□□ -0.59
DDX39B-216ENST00000462421 EXOSC9Q06265 439 aaKnown RBP11.39□□□□□ -0.59
DDX39B-216ENST00000462421 GRAPQ13588 217 aa11.39□□□□□ -0.59
DDX39B-216ENST00000462421 CRY2Q49AN0 593 aa11.39□□□□□ -0.59
DDX39B-216ENST00000462421 SLC10A5Q5PT55 438 aa11.39□□□□□ -0.59
DDX39B-216ENST00000462421 DIEXFQ68CQ4 756 aaKnown RBP11.39□□□□□ -0.59
DDX39B-216ENST00000462421 PPP4R3CPQ6ZMV5 832 aa11.39□□□□□ -0.59
DDX39B-216ENST00000462421 SYNE4Q8N205 404 aa11.39□□□□□ -0.59
DDX39B-216ENST00000462421 LARGE2Q8N3Y3 721 aa11.39□□□□□ -0.59
DDX39B-216ENST00000462421 ZBTB38Q8NAP3 1195 aaPredicted RBP11.39□□□□□ -0.59
DDX39B-216ENST00000462421 GRAPLQ8TC17 118 aaPredicted RBP11.39□□□□□ -0.59
DDX39B-216ENST00000462421 FAM89AQ96GI7 184 aa11.39□□□□□ -0.59
DDX39B-216ENST00000462421 METTL22Q9BUU2 404 aaPredicted RBP11.39□□□□□ -0.59
DDX39B-216ENST00000462421 PHAXQ9H814 394 aaKnown RBP11.39□□□□□ -0.59
DDX39B-216ENST00000462421 KIAA1551Q9HCM1 1747 aa11.38□□□□□ -0.59
DDX39B-216ENST00000462421 PI4KAP2A4QPH2 592 aa11.38□□□□□ -0.59
DDX39B-216ENST00000462421 PPIP5K2O43314 1243 aa11.38□□□□□ -0.59
DDX39B-216ENST00000462421 HOXA10P31260 410 aaPredicted RBP11.38□□□□□ -0.59
DDX39B-216ENST00000462421 FLIIQ13045 1269 aa11.38□□□□□ -0.59
DDX39B-216ENST00000462421 LRP10Q7Z4F1 713 aa11.38□□□□□ -0.59
DDX39B-216ENST00000462421 TSPYL6Q8N831 410 aa11.38□□□□□ -0.59
DDX39B-216ENST00000462421 PI4KAP1Q8N8J0 262 aa11.38□□□□□ -0.59
DDX39B-216ENST00000462421 PSMD1Q99460 953 aa11.38□□□□□ -0.59
DDX39B-216ENST00000462421 EYA3Q99504 573 aa11.38□□□□□ -0.59
DDX39B-216ENST00000462421 ISCA1Q9BUE6 129 aa11.38□□□□□ -0.59
DDX39B-216ENST00000462421 RRAGCQ9HB90 399 aa11.38□□□□□ -0.59
DDX39B-216ENST00000462421 ZNF277Q9NRM2 450 aaPredicted RBP11.38□□□□□ -0.59
DDX39B-216ENST00000462421 DLEC1Q9Y238 1755 aa11.38□□□□□ -0.59
DDX39B-216ENST00000462421 ABCC4O15439 1325 aa11.37□□□□□ -0.59
DDX39B-216ENST00000462421 PCCAP05165 728 aaPredicted RBP11.37□□□□□ -0.59
DDX39B-216ENST00000462421 TRIM28Q13263 835 aaKnown RBP11.37□□□□□ -0.59
DDX39B-216ENST00000462421 MPNDQ8N594 471 aa11.37□□□□□ -0.59
DDX39B-216ENST00000462421 SMC1BQ8NDV3 1235 aa11.37□□□□□ -0.59
DDX39B-216ENST00000462421 CDC5LQ99459 802 aaKnown RBP11.37□□□□□ -0.59
DDX39B-216ENST00000462421 VPS33BQ9H267 617 aa11.37□□□□□ -0.59
DDX39B-216ENST00000462421 ATP6V0A2Q9Y487 856 aa11.37□□□□□ -0.59
DDX39B-216ENST00000462421 GOLGB1Q14789 3259 aaKnown RBP11.36□□□□□ -0.59
DDX39B-216ENST00000462421 PDE8AO60658 829 aa11.36□□□□□ -0.59
DDX39B-216ENST00000462421 FSTL1Q12841 308 aa11.36□□□□□ -0.59
DDX39B-216ENST00000462421 RBM46Q8TBY0 533 aaKnown RBP11.36□□□□□ -0.59
DDX39B-216ENST00000462421 DNAAF4Q8WXU2 420 aa11.36□□□□□ -0.59
DDX39B-216ENST00000462421 ZNF428Q96B54 188 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms