RNA–Protein interactions for RNA: ENST00000462260.1

PCOLCE-203, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 554 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-203ENST00000462260 GLTPD2A6NH11 291 aa17.82■□□□□ 0.44
PCOLCE-203ENST00000462260 CCDC93Q567U6 631 aa17.82■□□□□ 0.44
PCOLCE-203ENST00000462260 HSP90AB3PQ58FF7 597 aa17.82■□□□□ 0.44
PCOLCE-203ENST00000462260 MRS2Q9HD23 443 aa17.82■□□□□ 0.44
PCOLCE-203ENST00000462260 HOXA10P31260 410 aaPredicted RBP17.81■□□□□ 0.44
PCOLCE-203ENST00000462260 TCIRG1Q13488 830 aa17.81■□□□□ 0.44
PCOLCE-203ENST00000462260 UTP14AQ9BVJ6 771 aaKnown RBP17.81■□□□□ 0.44
PCOLCE-203ENST00000462260 RRAGCQ9HB90 399 aa17.81■□□□□ 0.44
PCOLCE-203ENST00000462260 RNF123Q5XPI4 1314 aa17.8■□□□□ 0.44
PCOLCE-203ENST00000462260 CEP350Q5VT06 3117 aa17.8■□□□□ 0.44
PCOLCE-203ENST00000462260 HSPA6P17066 643 aa17.8■□□□□ 0.44
PCOLCE-203ENST00000462260 CCDC27Q2M243 656 aa17.8■□□□□ 0.44
PCOLCE-203ENST00000462260 OLFM4Q6UX06 510 aa17.8■□□□□ 0.44
PCOLCE-203ENST00000462260 NLRP10Q86W26 655 aa17.8■□□□□ 0.44
PCOLCE-203ENST00000462260 PLBD2Q8NHP8 589 aa17.8■□□□□ 0.44
PCOLCE-203ENST00000462260 SLC10A5Q5PT55 438 aa17.79■□□□□ 0.44
PCOLCE-203ENST00000462260 ANKRD13DQ6ZTN6 518 aa17.79■□□□□ 0.44
PCOLCE-203ENST00000462260 C3orf67Q6ZVT6 689 aa17.79■□□□□ 0.44
PCOLCE-203ENST00000462260 RBM46Q8TBY0 533 aaKnown RBP17.79■□□□□ 0.44
PCOLCE-203ENST00000462260 RPGRQ92834 1020 aaKnown RBP17.79■□□□□ 0.44
PCOLCE-203ENST00000462260 HYPKQ9NX55 129 aa17.79■□□□□ 0.44
PCOLCE-203ENST00000462260 FKBP4Q02790 459 aaKnown RBP eCLIP17.78■□□□□ 0.44
PCOLCE-203ENST00000462260 NCBP3Q53F19 620 aaKnown RBP17.78■□□□□ 0.44
PCOLCE-203ENST00000462260 RTKN2Q8IZC4 609 aa17.78■□□□□ 0.44
PCOLCE-203ENST00000462260 C8orf58Q8NAV2 365 aa17.78■□□□□ 0.44
PCOLCE-203ENST00000462260 CRAMP1Q96RY5 1269 aa17.78■□□□□ 0.44
PCOLCE-203ENST00000462260 SNED1Q8TER0 1413 aa17.78■□□□□ 0.44
PCOLCE-203ENST00000462260 ELL2O00472 640 aaPredicted RBP17.77■□□□□ 0.44
PCOLCE-203ENST00000462260 DPY19L2Q6NUT2 758 aa17.77■□□□□ 0.44
PCOLCE-203ENST00000462260 WWC1Q8IX03 1113 aa17.77■□□□□ 0.44
PCOLCE-203ENST00000462260 C16orf71Q8IYS4 520 aaPredicted RBP17.77■□□□□ 0.44
PCOLCE-203ENST00000462260 NLRP3Q96P20 1036 aa17.77■□□□□ 0.44
PCOLCE-203ENST00000462260 CC2D2BQ6DHV5 1058 aa17.76■□□□□ 0.43
PCOLCE-203ENST00000462260 RBM17Q96I25 401 aaKnown RBP17.76■□□□□ 0.43
PCOLCE-203ENST00000462260 ISCA1Q9BUE6 129 aa17.76■□□□□ 0.43
PCOLCE-203ENST00000462260 WDR90Q96KV7 1748 aa17.75■□□□□ 0.43
PCOLCE-203ENST00000462260 VEGFAP15692 232 aaPredicted RBP17.75■□□□□ 0.43
PCOLCE-203ENST00000462260 SYNE4Q8N205 404 aa17.75■□□□□ 0.43
PCOLCE-203ENST00000462260 ZNF277Q9NRM2 450 aaPredicted RBP17.75■□□□□ 0.43
PCOLCE-203ENST00000462260 TRMT112Q9UI30 125 aaKnown RBP17.75■□□□□ 0.43
PCOLCE-203ENST00000462260 SH3TC1Q8TE82 1336 aa17.74■□□□□ 0.43
PCOLCE-203ENST00000462260 POTECB2RU33 542 aa17.74■□□□□ 0.43
PCOLCE-203ENST00000462260 TSPYL6Q8N831 410 aa17.74■□□□□ 0.43
PCOLCE-203ENST00000462260 PSMD1Q99460 953 aa17.74■□□□□ 0.43
PCOLCE-203ENST00000462260 LAMB2P55268 1798 aa17.74■□□□□ 0.43
PCOLCE-203ENST00000462260 IL16Q14005 1332 aa17.73■□□□□ 0.43
PCOLCE-203ENST00000462260 PPEF1O14829 653 aaPredicted RBP17.73■□□□□ 0.43
PCOLCE-203ENST00000462260 HCLS1P14317 486 aaPredicted RBP17.73■□□□□ 0.43
PCOLCE-203ENST00000462260 FSTL1Q12841 308 aa17.73■□□□□ 0.43
PCOLCE-203ENST00000462260 TRIM28Q13263 835 aaKnown RBP17.73■□□□□ 0.43
PCOLCE-203ENST00000462260 TSR2Q969E8 191 aaKnown RBP17.73■□□□□ 0.43
PCOLCE-203ENST00000462260 CHMP4AQ9BY43 222 aa17.73■□□□□ 0.43
PCOLCE-203ENST00000462260 PHAXQ9H814 394 aaKnown RBP17.73■□□□□ 0.43
PCOLCE-203ENST00000462260 ATP5J2-PTCD1G3V325 749 aa17.72■□□□□ 0.43
PCOLCE-203ENST00000462260 IARSP41252 1262 aaKnown RBP17.72■□□□□ 0.43
PCOLCE-203ENST00000462260 GRIPAP1Q4V328 841 aa17.72■□□□□ 0.43
PCOLCE-203ENST00000462260 CCDC30Q5VVM6 783 aa17.72■□□□□ 0.43
PCOLCE-203ENST00000462260 ABCC4O15439 1325 aa17.72■□□□□ 0.43
PCOLCE-203ENST00000462260 DDNO94850 711 aaPredicted RBP17.71■□□□□ 0.43
PCOLCE-203ENST00000462260 GOLGA2Q08379 1002 aa17.71■□□□□ 0.43
PCOLCE-203ENST00000462260 SLC51AQ86UW1 340 aa17.71■□□□□ 0.43
PCOLCE-203ENST00000462260 DDX60Q8IY21 1712 aaKnown RBP17.7■□□□□ 0.42
PCOLCE-203ENST00000462260 APLP1P51693 650 aa17.7■□□□□ 0.42
PCOLCE-203ENST00000462260 RIC3Q7Z5B4 369 aa17.7■□□□□ 0.42
PCOLCE-203ENST00000462260 SMC1BQ8NDV3 1235 aa17.7■□□□□ 0.42
PCOLCE-203ENST00000462260 ZNF428Q96B54 188 aa17.7■□□□□ 0.42
PCOLCE-203ENST00000462260 ATP6V0A2Q9Y487 856 aa17.7■□□□□ 0.42
PCOLCE-203ENST00000462260 FZD9O00144 591 aa17.69■□□□□ 0.42
PCOLCE-203ENST00000462260 FAM89AQ96GI7 184 aa17.69■□□□□ 0.42
PCOLCE-203ENST00000462260 L3MBTL3Q96JM7 780 aaPredicted RBP17.69■□□□□ 0.42
PCOLCE-203ENST00000462260 TCERG1O14776 1098 aaKnown RBP17.68■□□□□ 0.42
PCOLCE-203ENST00000462260 BBOX1O75936 387 aa17.68■□□□□ 0.42
PCOLCE-203ENST00000462260 WDR63Q8IWG1 891 aa17.68■□□□□ 0.42
PCOLCE-203ENST00000462260 ZNF541Q9H0D2 1346 aa17.68■□□□□ 0.42
PCOLCE-203ENST00000462260 GRAPQ13588 217 aa17.67■□□□□ 0.42
PCOLCE-203ENST00000462260 SF3B3Q15393 1217 aaKnown RBP17.67■□□□□ 0.42
PCOLCE-203ENST00000462260 TWISTNBQ3B726 338 aaPredicted RBP17.67■□□□□ 0.42
PCOLCE-203ENST00000462260 DDX46Q7L014 1031 aaKnown RBP17.67■□□□□ 0.42
PCOLCE-203ENST00000462260 GRAPLQ8TC17 118 aaPredicted RBP17.67■□□□□ 0.42
PCOLCE-203ENST00000462260 COL4A5P29400 1685 aa17.67■□□□□ 0.42
PCOLCE-203ENST00000462260 DDX58O95786 925 aaKnown RBP17.66■□□□□ 0.42
PCOLCE-203ENST00000462260 SP8Q8IXZ3 490 aa17.66■□□□□ 0.42
PCOLCE-203ENST00000462260 FAM9BQ8IZU0 186 aa17.66■□□□□ 0.42
PCOLCE-203ENST00000462260 ZBTB38Q8NAP3 1195 aaPredicted RBP17.66■□□□□ 0.42
PCOLCE-203ENST00000462260 CCDC191Q8NCU4 936 aa17.66■□□□□ 0.42
PCOLCE-203ENST00000462260 JDP2Q8WYK2 163 aa17.66■□□□□ 0.42
PCOLCE-203ENST00000462260 MYD88Q99836 296 aa17.66■□□□□ 0.42
PCOLCE-203ENST00000462260 METTL22Q9BUU2 404 aaPredicted RBP17.66■□□□□ 0.42
PCOLCE-203ENST00000462260 TMX4Q9H1E5 349 aaPredicted RBP17.66■□□□□ 0.42
PCOLCE-203ENST00000462260 SALL2Q9Y467 1007 aaPredicted RBP17.66■□□□□ 0.42
PCOLCE-203ENST00000462260 TAF1P21675 1872 aa17.66■□□□□ 0.42
PCOLCE-203ENST00000462260 FANCIQ9NVI1 1328 aa17.66■□□□□ 0.42
PCOLCE-203ENST00000462260 SCN4AP35499 1836 aa17.65■□□□□ 0.42
PCOLCE-203ENST00000462260 IRS4O14654 1257 aaPredicted RBP17.65■□□□□ 0.42
PCOLCE-203ENST00000462260 STK31Q9BXU1 1019 aa17.65■□□□□ 0.42
PCOLCE-203ENST00000462260 RTFDC1Q9BY42 306 aaPredicted RBP17.65■□□□□ 0.42
PCOLCE-203ENST00000462260 IQCA1LA6NCM1 817 aa17.64■□□□□ 0.41
PCOLCE-203ENST00000462260 RTL5Q5HYW3 569 aaPredicted RBP17.64■□□□□ 0.41
PCOLCE-203ENST00000462260 TMC4Q7Z404 712 aa17.64■□□□□ 0.41
PCOLCE-203ENST00000462260 LARGE2Q8N3Y3 721 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms