RNA–Protein interactions for RNA: ENST00000462219.5

LINC00879-201, long intergenic non-protein coding RNA 879, humanhuman

TSL 2

Gene LINC00879, Length 695 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00879-201ENST00000462219 PPP1R42Q7Z4L9 355 aa16.62■□□□□ 0.25
LINC00879-201ENST00000462219 MYD88Q99836 296 aa16.62■□□□□ 0.25
LINC00879-201ENST00000462219 NYXQ9GZU5 481 aa16.62■□□□□ 0.25
LINC00879-201ENST00000462219 ABCC12Q96J65 1359 aa16.62■□□□□ 0.25
LINC00879-201ENST00000462219 RARSP54136 660 aaKnown RBP16.61■□□□□ 0.25
LINC00879-201ENST00000462219 ST5P78524 1137 aa16.61■□□□□ 0.25
LINC00879-201ENST00000462219 SYNE4Q8N205 404 aa16.61■□□□□ 0.25
LINC00879-201ENST00000462219 UTP14AQ9BVJ6 771 aaKnown RBP16.61■□□□□ 0.25
LINC00879-201ENST00000462219 BCL2L13Q9BXK5 485 aa16.61■□□□□ 0.25
LINC00879-201ENST00000462219 DDX60Q8IY21 1712 aaKnown RBP16.61■□□□□ 0.25
LINC00879-201ENST00000462219 PDE6BP35913 854 aa16.6■□□□□ 0.25
LINC00879-201ENST00000462219 SLC10A5Q5PT55 438 aa16.6■□□□□ 0.25
LINC00879-201ENST00000462219 DNAAF4Q8WXU2 420 aa16.6■□□□□ 0.25
LINC00879-201ENST00000462219 ARFGEF1Q9Y6D6 1849 aa16.6■□□□□ 0.25
LINC00879-201ENST00000462219 RIC1Q4ADV7 1423 aa16.6■□□□□ 0.25
LINC00879-201ENST00000462219 CACNA1SQ13698 1873 aa16.59■□□□□ 0.25
LINC00879-201ENST00000462219 F6X3S4 739 aa16.59■□□□□ 0.25
LINC00879-201ENST00000462219 NPHP1O15259 732 aa16.59■□□□□ 0.25
LINC00879-201ENST00000462219 YBX3P16989 372 aaKnown RBP eCLIP16.59■□□□□ 0.25
LINC00879-201ENST00000462219 GTF2E1P29083 439 aaPredicted RBP16.59■□□□□ 0.25
LINC00879-201ENST00000462219 BRPF1P55201 1214 aaPredicted RBP16.59■□□□□ 0.25
LINC00879-201ENST00000462219 C2CD5Q86YS7 1000 aa16.59■□□□□ 0.25
LINC00879-201ENST00000462219 CCDC191Q8NCU4 936 aa16.59■□□□□ 0.25
LINC00879-201ENST00000462219 TRMT112Q9UI30 125 aaKnown RBP16.59■□□□□ 0.25
LINC00879-201ENST00000462219 RNF123Q5XPI4 1314 aa16.59■□□□□ 0.25
LINC00879-201ENST00000462219 SRGNP10124 158 aa16.58■□□□□ 0.24
LINC00879-201ENST00000462219 CWF19L2Q2TBE0 894 aaKnown RBP16.58■□□□□ 0.24
LINC00879-201ENST00000462219 C3orf67Q6ZVT6 689 aa16.58■□□□□ 0.24
LINC00879-201ENST00000462219 SMC4Q9NTJ3 1288 aa16.58■□□□□ 0.24
LINC00879-201ENST00000462219 WWC3Q9ULE0 1092 aa16.58■□□□□ 0.24
LINC00879-201ENST00000462219 GOLGB1Q14789 3259 aaKnown RBP16.57■□□□□ 0.24
LINC00879-201ENST00000462219 SLX4Q8IY92 1834 aa16.57■□□□□ 0.24
LINC00879-201ENST00000462219 SH3TC1Q8TE82 1336 aa16.57■□□□□ 0.24
LINC00879-201ENST00000462219 NEURL1BA8MQ27 555 aa16.57■□□□□ 0.24
LINC00879-201ENST00000462219 H0YIN7 160 aa16.57■□□□□ 0.24
LINC00879-201ENST00000462219 FAM89AQ96GI7 184 aa16.57■□□□□ 0.24
LINC00879-201ENST00000462219 PIM2Q9P1W9 311 aa16.57■□□□□ 0.24
LINC00879-201ENST00000462219 PDZRN3Q9UPQ7 1066 aa16.57■□□□□ 0.24
LINC00879-201ENST00000462219 PTPRCP08575 1304 aa16.56■□□□□ 0.24
LINC00879-201ENST00000462219 NEXNQ0ZGT2 675 aa16.56■□□□□ 0.24
LINC00879-201ENST00000462219 CRY2Q49AN0 593 aa16.56■□□□□ 0.24
LINC00879-201ENST00000462219 BEND3Q5T5X7 828 aa16.56■□□□□ 0.24
LINC00879-201ENST00000462219 LINS1Q8NG48 757 aa16.56■□□□□ 0.24
LINC00879-201ENST00000462219 CWC25Q9NXE8 425 aaPredicted RBP16.56■□□□□ 0.24
LINC00879-201ENST00000462219 TAF1P21675 1872 aa16.56■□□□□ 0.24
LINC00879-201ENST00000462219 BCAR3O75815 825 aa16.55■□□□□ 0.24
LINC00879-201ENST00000462219 PCCAP05165 728 aaPredicted RBP16.55■□□□□ 0.24
LINC00879-201ENST00000462219 HCLS1P14317 486 aaPredicted RBP16.55■□□□□ 0.24
LINC00879-201ENST00000462219 GPR162Q16538 588 aa16.55■□□□□ 0.24
LINC00879-201ENST00000462219 ZBTB38Q8NAP3 1195 aaPredicted RBP16.55■□□□□ 0.24
LINC00879-201ENST00000462219 JARID2Q92833 1246 aaPredicted RBP16.55■□□□□ 0.24
LINC00879-201ENST00000462219 NOB1Q9ULX3 412 aaKnown RBP16.55■□□□□ 0.24
LINC00879-201ENST00000462219 GCKRQ14397 625 aa16.54■□□□□ 0.24
LINC00879-201ENST00000462219 RTL5Q5HYW3 569 aaPredicted RBP16.54■□□□□ 0.24
LINC00879-201ENST00000462219 STYK1Q6J9G0 422 aa16.54■□□□□ 0.24
LINC00879-201ENST00000462219 PELP1Q8IZL8 1130 aaKnown RBP16.54■□□□□ 0.24
LINC00879-201ENST00000462219 MASTLQ96GX5 879 aa16.54■□□□□ 0.24
LINC00879-201ENST00000462219 MYH3P11055 1940 aa16.54■□□□□ 0.24
LINC00879-201ENST00000462219 CHD4Q14839 1912 aa16.53■□□□□ 0.24
LINC00879-201ENST00000462219 H7C1W4 665 aa16.53■□□□□ 0.24
LINC00879-201ENST00000462219 NPR1P16066 1061 aa16.53■□□□□ 0.24
LINC00879-201ENST00000462219 DALRD3Q5D0E6 543 aaKnown RBP16.53■□□□□ 0.24
LINC00879-201ENST00000462219 ZNF622Q969S3 477 aaKnown RBP eCLIP16.53■□□□□ 0.24
LINC00879-201ENST00000462219 NLRP3Q96P20 1036 aa16.53■□□□□ 0.24
LINC00879-201ENST00000462219 BCS1LQ9Y276 419 aa16.53■□□□□ 0.24
LINC00879-201ENST00000462219 IRS4O14654 1257 aaPredicted RBP16.52■□□□□ 0.24
LINC00879-201ENST00000462219 HOXA10P31260 410 aaPredicted RBP16.52■□□□□ 0.24
LINC00879-201ENST00000462219 CASP7P55210 303 aa16.52■□□□□ 0.24
LINC00879-201ENST00000462219 TTLL6Q8N841 843 aa16.52■□□□□ 0.24
LINC00879-201ENST00000462219 YTHDC1Q96MU7 727 aaKnown RBP16.52■□□□□ 0.24
LINC00879-201ENST00000462219 UTRNP46939 3433 aa16.51■□□□□ 0.23
LINC00879-201ENST00000462219 CDHR2Q9BYE9 1310 aa16.51■□□□□ 0.23
LINC00879-201ENST00000462219 SLC4A10Q6U841 1118 aa16.51■□□□□ 0.23
LINC00879-201ENST00000462219 ARHGAP45Q92619 1136 aa16.51■□□□□ 0.23
LINC00879-201ENST00000462219 DCAF8L1A6NGE4 600 aa16.5■□□□□ 0.23
LINC00879-201ENST00000462219 ALDH1L1O75891 902 aa16.5■□□□□ 0.23
LINC00879-201ENST00000462219 SF3B3Q15393 1217 aaKnown RBP16.5■□□□□ 0.23
LINC00879-201ENST00000462219 C7orf43Q8WVR3 580 aa16.5■□□□□ 0.23
LINC00879-201ENST00000462219 CNKSR1Q969H4 720 aa16.5■□□□□ 0.23
LINC00879-201ENST00000462219 SRCIN1Q9C0H9 1055 aa16.5■□□□□ 0.23
LINC00879-201ENST00000462219 SBF1O95248 1867 aa16.5■□□□□ 0.23
LINC00879-201ENST00000462219 FER1L6Q2WGJ9 1857 aa16.5■□□□□ 0.23
LINC00879-201ENST00000462219 KIF16BQ96L93 1317 aa16.49■□□□□ 0.23
LINC00879-201ENST00000462219 GRIN3BO60391 1043 aa16.49■□□□□ 0.23
LINC00879-201ENST00000462219 UBE3BQ7Z3V4 1068 aa16.49■□□□□ 0.23
LINC00879-201ENST00000462219 CRAMP1Q96RY5 1269 aa16.49■□□□□ 0.23
LINC00879-201ENST00000462219 COL4A1P02462 1669 aa16.49■□□□□ 0.23
LINC00879-201ENST00000462219 CCDC88AQ3V6T2 1871 aa16.48■□□□□ 0.23
LINC00879-201ENST00000462219 PDE8AO60658 829 aa16.48■□□□□ 0.23
LINC00879-201ENST00000462219 ALDH1B1P30837 517 aa16.48■□□□□ 0.23
LINC00879-201ENST00000462219 PRPF40BQ6NWY9 871 aaKnown RBP16.48■□□□□ 0.23
LINC00879-201ENST00000462219 RPGRQ92834 1020 aaKnown RBP16.48■□□□□ 0.23
LINC00879-201ENST00000462219 API5Q9BZZ5 524 aaKnown RBP16.48■□□□□ 0.23
LINC00879-201ENST00000462219 TNNQ9UQP3 1299 aa16.48■□□□□ 0.23
LINC00879-201ENST00000462219 RBM17Q96I25 401 aaKnown RBP16.47■□□□□ 0.23
LINC00879-201ENST00000462219 PLA2G12BQ9BX93 195 aa16.47■□□□□ 0.23
LINC00879-201ENST00000462219 UTYO14607 1347 aa16.46■□□□□ 0.23
LINC00879-201ENST00000462219 GRM8O00222 908 aa16.46■□□□□ 0.23
LINC00879-201ENST00000462219 C21orf2O43822 256 aa16.46■□□□□ 0.23
LINC00879-201ENST00000462219 TRIM27P14373 513 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms