RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 TNRC6CQ9HCJ0 1690 aaKnown RBP11.48□□□□□ -0.57
LDB1-203ENST00000461873 SLX4Q8IY92 1834 aa11.47□□□□□ -0.57
LDB1-203ENST00000461873 IQCA1LA6NCM1 817 aa11.47□□□□□ -0.57
LDB1-203ENST00000461873 ZNF316A6NFI3 1004 aaPredicted RBP11.47□□□□□ -0.57
LDB1-203ENST00000461873 TCERG1O14776 1098 aaKnown RBP11.47□□□□□ -0.57
LDB1-203ENST00000461873 ANXA1P04083 346 aa11.47□□□□□ -0.57
LDB1-203ENST00000461873 HSP90B1P14625 803 aaKnown RBP11.47□□□□□ -0.57
LDB1-203ENST00000461873 FKBP4Q02790 459 aaKnown RBP eCLIP11.47□□□□□ -0.57
LDB1-203ENST00000461873 SUSD4Q5VX71 490 aa11.47□□□□□ -0.57
LDB1-203ENST00000461873 HYPKQ9NX55 129 aa11.47□□□□□ -0.57
LDB1-203ENST00000461873 TRMT112Q9UI30 125 aaKnown RBP11.47□□□□□ -0.57
LDB1-203ENST00000461873 TRIM35Q9UPQ4 493 aa11.47□□□□□ -0.57
LDB1-203ENST00000461873 COL11A2P13942 1736 aaPredicted RBP11.46□□□□□ -0.57
LDB1-203ENST00000461873 IBTKQ9P2D0 1353 aaPredicted RBP11.46□□□□□ -0.57
LDB1-203ENST00000461873 RNF123Q5XPI4 1314 aa11.46□□□□□ -0.57
LDB1-203ENST00000461873 KLRG2A4D1S0 409 aaPredicted RBP11.46□□□□□ -0.57
LDB1-203ENST00000461873 GOLGA2Q08379 1002 aa11.46□□□□□ -0.57
LDB1-203ENST00000461873 DUSP27Q5VZP5 1158 aa11.46□□□□□ -0.57
LDB1-203ENST00000461873 RIC3Q7Z5B4 369 aa11.46□□□□□ -0.57
LDB1-203ENST00000461873 ZNF34Q8IZ26 560 aa11.46□□□□□ -0.57
LDB1-203ENST00000461873 IFT57Q9NWB7 429 aa11.46□□□□□ -0.57
LDB1-203ENST00000461873 CHPF2Q9P2E5 772 aa11.46□□□□□ -0.57
LDB1-203ENST00000461873 TIAM2Q8IVF5 1701 aa11.46□□□□□ -0.58
LDB1-203ENST00000461873 DICER1Q9UPY3 1922 aaKnown RBP11.45□□□□□ -0.58
LDB1-203ENST00000461873 FER1L6Q2WGJ9 1857 aa11.45□□□□□ -0.58
LDB1-203ENST00000461873 PPEF1O14829 653 aaPredicted RBP11.45□□□□□ -0.58
LDB1-203ENST00000461873 DDX58O95786 925 aaKnown RBP11.45□□□□□ -0.58
LDB1-203ENST00000461873 EIF6P56537 245 aaKnown RBP11.45□□□□□ -0.58
LDB1-203ENST00000461873 TCIRG1Q13488 830 aa11.45□□□□□ -0.58
LDB1-203ENST00000461873 ANKRD13DQ6ZTN6 518 aa11.45□□□□□ -0.58
LDB1-203ENST00000461873 DDX46Q7L014 1031 aaKnown RBP11.45□□□□□ -0.58
LDB1-203ENST00000461873 SYNE4Q8N205 404 aa11.45□□□□□ -0.58
LDB1-203ENST00000461873 SUPT20HQ8NEM7 779 aa11.45□□□□□ -0.58
LDB1-203ENST00000461873 MRS2Q9HD23 443 aa11.45□□□□□ -0.58
LDB1-203ENST00000461873 ZNF277Q9NRM2 450 aaPredicted RBP11.45□□□□□ -0.58
LDB1-203ENST00000461873 ARFGEF2Q9Y6D5 1785 aa11.45□□□□□ -0.58
LDB1-203ENST00000461873 SH3TC1Q8TE82 1336 aa11.44□□□□□ -0.58
LDB1-203ENST00000461873 ELL2O00472 640 aaPredicted RBP11.44□□□□□ -0.58
LDB1-203ENST00000461873 IARSP41252 1262 aaKnown RBP11.44□□□□□ -0.58
LDB1-203ENST00000461873 PDIA6Q15084 440 aa11.44□□□□□ -0.58
LDB1-203ENST00000461873 PROSER3Q2NL68 480 aa11.44□□□□□ -0.58
LDB1-203ENST00000461873 PLBD2Q8NHP8 589 aa11.44□□□□□ -0.58
LDB1-203ENST00000461873 CRAMP1Q96RY5 1269 aa11.44□□□□□ -0.58
LDB1-203ENST00000461873 STK31Q9BXU1 1019 aa11.44□□□□□ -0.58
LDB1-203ENST00000461873 MBIPQ9NS73 344 aa11.44□□□□□ -0.58
LDB1-203ENST00000461873 CLEC11AQ9Y240 323 aa11.44□□□□□ -0.58
LDB1-203ENST00000461873 UBN2Q6ZU65 1347 aa11.43□□□□□ -0.58
LDB1-203ENST00000461873 DDNO94850 711 aaPredicted RBP11.43□□□□□ -0.58
LDB1-203ENST00000461873 NTSR2O95665 410 aa11.43□□□□□ -0.58
LDB1-203ENST00000461873 LMOD1P29536 600 aaPredicted RBP11.43□□□□□ -0.58
LDB1-203ENST00000461873 KRT24Q2M2I5 525 aa11.43□□□□□ -0.58
LDB1-203ENST00000461873 CRY2Q49AN0 593 aa11.43□□□□□ -0.58
LDB1-203ENST00000461873 CCDC30Q5VVM6 783 aa11.43□□□□□ -0.58
LDB1-203ENST00000461873 LARGE2Q8N3Y3 721 aa11.43□□□□□ -0.58
LDB1-203ENST00000461873 ABCC12Q96J65 1359 aa11.42□□□□□ -0.58
LDB1-203ENST00000461873 BBOX1O75936 387 aa11.42□□□□□ -0.58
LDB1-203ENST00000461873 HOXA10P31260 410 aaPredicted RBP11.42□□□□□ -0.58
LDB1-203ENST00000461873 EAPPQ56P03 285 aaPredicted RBP11.42□□□□□ -0.58
LDB1-203ENST00000461873 NLRP10Q86W26 655 aa11.42□□□□□ -0.58
LDB1-203ENST00000461873 NIM1KQ8IY84 436 aa11.42□□□□□ -0.58
LDB1-203ENST00000461873 PSMD1Q99460 953 aa11.42□□□□□ -0.58
LDB1-203ENST00000461873 GJA3Q9Y6H8 435 aa11.42□□□□□ -0.58
LDB1-203ENST00000461873 HCLS1P14317 486 aaPredicted RBP11.41□□□□□ -0.58
LDB1-203ENST00000461873 PRELPP51888 382 aa11.41□□□□□ -0.58
LDB1-203ENST00000461873 SLC10A5Q5PT55 438 aa11.41□□□□□ -0.58
LDB1-203ENST00000461873 DPP8Q6V1X1 898 aaPredicted RBP11.41□□□□□ -0.58
LDB1-203ENST00000461873 TMC4Q7Z404 712 aa11.41□□□□□ -0.58
LDB1-203ENST00000461873 PNMA8AQ86V59 439 aaPredicted RBP11.41□□□□□ -0.58
LDB1-203ENST00000461873 C7orf43Q8WVR3 580 aa11.41□□□□□ -0.58
LDB1-203ENST00000461873 HACL1Q9UJ83 578 aa11.41□□□□□ -0.58
LDB1-203ENST00000461873 RIC1Q4ADV7 1423 aa11.41□□□□□ -0.58
LDB1-203ENST00000461873 ATP5J2-PTCD1G3V325 749 aa11.4□□□□□ -0.58
LDB1-203ENST00000461873 PPIP5K2O43314 1243 aa11.4□□□□□ -0.58
LDB1-203ENST00000461873 NEXNQ0ZGT2 675 aa11.4□□□□□ -0.58
LDB1-203ENST00000461873 CHADLQ6NUI6 762 aa11.4□□□□□ -0.58
LDB1-203ENST00000461873 OLFM4Q6UX06 510 aa11.4□□□□□ -0.58
LDB1-203ENST00000461873 VPS33BQ9H267 617 aa11.4□□□□□ -0.58
LDB1-203ENST00000461873 ATP6V0A2Q9Y487 856 aa11.4□□□□□ -0.58
LDB1-203ENST00000461873 ANKRD36CQ5JPF3 1778 aa11.4□□□□□ -0.58
LDB1-203ENST00000461873 G3V3G9 751 aa11.39□□□□□ -0.59
LDB1-203ENST00000461873 GRAPQ13588 217 aa11.39□□□□□ -0.59
LDB1-203ENST00000461873 RTL5Q5HYW3 569 aaPredicted RBP11.39□□□□□ -0.59
LDB1-203ENST00000461873 DCAF8Q5TAQ9 597 aa11.39□□□□□ -0.59
LDB1-203ENST00000461873 LDHDQ86WU2 507 aa11.39□□□□□ -0.59
LDB1-203ENST00000461873 GPC2Q8N158 579 aa11.39□□□□□ -0.59
LDB1-203ENST00000461873 MPNDQ8N594 471 aa11.39□□□□□ -0.59
LDB1-203ENST00000461873 GRAPLQ8TC17 118 aaPredicted RBP11.39□□□□□ -0.59
LDB1-203ENST00000461873 WDR90Q96KV7 1748 aa11.39□□□□□ -0.59
LDB1-203ENST00000461873 SALL2Q9Y467 1007 aaPredicted RBP11.39□□□□□ -0.59
LDB1-203ENST00000461873 ABCC4O15439 1325 aa11.38□□□□□ -0.59
LDB1-203ENST00000461873 LRP10Q7Z4F1 713 aa11.38□□□□□ -0.59
LDB1-203ENST00000461873 SP8Q8IXZ3 490 aa11.38□□□□□ -0.59
LDB1-203ENST00000461873 ZNF428Q96B54 188 aa11.38□□□□□ -0.59
LDB1-203ENST00000461873 FAM89AQ96GI7 184 aa11.38□□□□□ -0.59
LDB1-203ENST00000461873 MYD88Q99836 296 aa11.38□□□□□ -0.59
LDB1-203ENST00000461873 CEP350Q5VT06 3117 aa11.38□□□□□ -0.59
LDB1-203ENST00000461873 SCN4AP35499 1836 aa11.37□□□□□ -0.59
LDB1-203ENST00000461873 FZD9O00144 591 aa11.37□□□□□ -0.59
LDB1-203ENST00000461873 IRS4O14654 1257 aaPredicted RBP11.37□□□□□ -0.59
LDB1-203ENST00000461873 ZNF853P0CG23 659 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms