RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 PIP4K2AP48426 406 aaPredicted RBP19.17■□□□□ 0.66
TMEM39A-203ENST00000461654 BRIP1Q9BX63 1249 aa19.17■□□□□ 0.66
TMEM39A-203ENST00000461654 MYL6BP14649 208 aa19.16■□□□□ 0.66
TMEM39A-203ENST00000461654 CCT4P50991 539 aaKnown RBP19.16■□□□□ 0.66
TMEM39A-203ENST00000461654 PRR5LQ6MZQ0 368 aa19.16■□□□□ 0.66
TMEM39A-203ENST00000461654 PHAXQ9H814 394 aaKnown RBP19.16■□□□□ 0.66
TMEM39A-203ENST00000461654 ZNF652Q9Y2D9 606 aa19.16■□□□□ 0.66
TMEM39A-203ENST00000461654 LAMB4A4D0S4 1761 aa19.15■□□□□ 0.66
TMEM39A-203ENST00000461654 H0YIN7 160 aa19.15■□□□□ 0.66
TMEM39A-203ENST00000461654 ANXA1P04083 346 aa19.15■□□□□ 0.66
TMEM39A-203ENST00000461654 C1QTNF8P60827 252 aa19.15■□□□□ 0.66
TMEM39A-203ENST00000461654 SLC4A10Q6U841 1118 aa19.15■□□□□ 0.66
TMEM39A-203ENST00000461654 ARFGEF1Q9Y6D6 1849 aa19.15■□□□□ 0.66
TMEM39A-203ENST00000461654 CACNA1FO60840 1977 aa19.14■□□□□ 0.65
TMEM39A-203ENST00000461654 PDE6BP35913 854 aa19.14■□□□□ 0.65
TMEM39A-203ENST00000461654 PDIA6Q15084 440 aa19.14■□□□□ 0.65
TMEM39A-203ENST00000461654 INTS3Q68E01 1043 aaKnown RBP19.14■□□□□ 0.65
TMEM39A-203ENST00000461654 C2CD5Q86YS7 1000 aa19.14■□□□□ 0.65
TMEM39A-203ENST00000461654 PROSER3Q2NL68 480 aa19.13■□□□□ 0.65
TMEM39A-203ENST00000461654 TTLL6Q8N841 843 aa19.13■□□□□ 0.65
TMEM39A-203ENST00000461654 BCORQ6W2J9 1755 aa19.13■□□□□ 0.65
TMEM39A-203ENST00000461654 ERVV-1B6SEH8 477 aa19.12■□□□□ 0.65
TMEM39A-203ENST00000461654 F6X3S4 739 aa19.12■□□□□ 0.65
TMEM39A-203ENST00000461654 AIMP1Q12904 312 aaKnown RBP19.12■□□□□ 0.65
TMEM39A-203ENST00000461654 CNBD1Q8NA66 436 aa19.12■□□□□ 0.65
TMEM39A-203ENST00000461654 GPBP1L1Q9HC44 474 aaPredicted RBP19.12■□□□□ 0.65
TMEM39A-203ENST00000461654 B4GALNT3Q6L9W6 998 aa19.11■□□□□ 0.65
TMEM39A-203ENST00000461654 KSR2Q6VAB6 950 aa19.11■□□□□ 0.65
TMEM39A-203ENST00000461654 XAGE3Q8WTP9 111 aa19.11■□□□□ 0.65
TMEM39A-203ENST00000461654 PI4KAP2A4QPH2 592 aa19.1■□□□□ 0.65
TMEM39A-203ENST00000461654 COPS6Q7L5N1 327 aa19.1■□□□□ 0.65
TMEM39A-203ENST00000461654 RIC3Q7Z5B4 369 aa19.1■□□□□ 0.65
TMEM39A-203ENST00000461654 PI4KAP1Q8N8J0 262 aa19.1■□□□□ 0.65
TMEM39A-203ENST00000461654 DNAAF4Q8WXU2 420 aa19.1■□□□□ 0.65
TMEM39A-203ENST00000461654 DLEC1Q9Y238 1755 aa19.1■□□□□ 0.65
TMEM39A-203ENST00000461654 ST5P78524 1137 aa19.09■□□□□ 0.65
TMEM39A-203ENST00000461654 HLFQ16534 295 aa19.09■□□□□ 0.65
TMEM39A-203ENST00000461654 TPTE2Q6XPS3 522 aa19.09■□□□□ 0.65
TMEM39A-203ENST00000461654 NEXNQ0ZGT2 675 aa19.08■□□□□ 0.64
TMEM39A-203ENST00000461654 C9orf131Q5VYM1 1079 aa19.08■□□□□ 0.64
TMEM39A-203ENST00000461654 ANKRD13DQ6ZTN6 518 aa19.08■□□□□ 0.64
TMEM39A-203ENST00000461654 NBPF5PQ86XG9 351 aaPredicted RBP19.08■□□□□ 0.64
TMEM39A-203ENST00000461654 SRCIN1Q9C0H9 1055 aa19.08■□□□□ 0.64
TMEM39A-203ENST00000461654 NIP7Q9Y221 180 aaKnown RBP eCLIP19.08■□□□□ 0.64
TMEM39A-203ENST00000461654 MAP3K2Q9Y2U5 619 aa19.08■□□□□ 0.64
TMEM39A-203ENST00000461654 ANKRD31Q8N7Z5 1873 aa19.07■□□□□ 0.64
TMEM39A-203ENST00000461654 MAP3K15Q6ZN16 1313 aa19.07■□□□□ 0.64
TMEM39A-203ENST00000461654 KLRG2A4D1S0 409 aaPredicted RBP19.07■□□□□ 0.64
TMEM39A-203ENST00000461654 ZBTB7BO15156 539 aaPredicted RBP19.07■□□□□ 0.64
TMEM39A-203ENST00000461654 SRGNP10124 158 aa19.07■□□□□ 0.64
TMEM39A-203ENST00000461654 STYK1Q6J9G0 422 aa19.07■□□□□ 0.64
TMEM39A-203ENST00000461654 LRP10Q7Z4F1 713 aa19.07■□□□□ 0.64
TMEM39A-203ENST00000461654 NPHP1O15259 732 aa19.06■□□□□ 0.64
TMEM39A-203ENST00000461654 CCDC24Q8N4L8 307 aa19.06■□□□□ 0.64
TMEM39A-203ENST00000461654 CNKSR1Q969H4 720 aa19.06■□□□□ 0.64
TMEM39A-203ENST00000461654 ZNF622Q969S3 477 aaKnown RBP eCLIP19.06■□□□□ 0.64
TMEM39A-203ENST00000461654 ZBTB40Q9NUA8 1239 aa19.06■□□□□ 0.64
TMEM39A-203ENST00000461654 KIF6Q6ZMV9 814 aa19.05■□□□□ 0.64
TMEM39A-203ENST00000461654 TTLL7Q6ZT98 887 aa19.05■□□□□ 0.64
TMEM39A-203ENST00000461654 PLBD2Q8NHP8 589 aa19.05■□□□□ 0.64
TMEM39A-203ENST00000461654 ZNF526Q8TF50 670 aaPredicted RBP19.05■□□□□ 0.64
TMEM39A-203ENST00000461654 MASTLQ96GX5 879 aa19.05■□□□□ 0.64
TMEM39A-203ENST00000461654 KIF3CO14782 793 aa19.04■□□□□ 0.64
TMEM39A-203ENST00000461654 ALDH1L1O75891 902 aa19.04■□□□□ 0.64
TMEM39A-203ENST00000461654 GNAI3P08754 354 aa19.04■□□□□ 0.64
TMEM39A-203ENST00000461654 ZC3H4Q9UPT8 1303 aaKnown RBP19.03■□□□□ 0.64
TMEM39A-203ENST00000461654 LMNB1P20700 586 aa19.03■□□□□ 0.64
TMEM39A-203ENST00000461654 BEND3Q5T5X7 828 aa19.03■□□□□ 0.64
TMEM39A-203ENST00000461654 LINS1Q8NG48 757 aa19.03■□□□□ 0.64
TMEM39A-203ENST00000461654 RNF181Q9P0P0 153 aa19.03■□□□□ 0.64
TMEM39A-203ENST00000461654 HDAC5Q9UQL6 1122 aa19.03■□□□□ 0.64
TMEM39A-203ENST00000461654 GIGYF2Q6Y7W6 1299 aaKnown RBP19.02■□□□□ 0.64
TMEM39A-203ENST00000461654 ZNF34Q8IZ26 560 aa19.02■□□□□ 0.64
TMEM39A-203ENST00000461654 METTL22Q9BUU2 404 aaPredicted RBP19.02■□□□□ 0.64
TMEM39A-203ENST00000461654 NYXQ9GZU5 481 aa19.02■□□□□ 0.64
TMEM39A-203ENST00000461654 RWDD1Q9H446 243 aaPredicted RBP19.02■□□□□ 0.64
TMEM39A-203ENST00000461654 NPR1P16066 1061 aa19.01■□□□□ 0.63
TMEM39A-203ENST00000461654 CENPQQ7L2Z9 268 aaPredicted RBP19.01■□□□□ 0.63
TMEM39A-203ENST00000461654 IBTKQ9P2D0 1353 aaPredicted RBP19.01■□□□□ 0.63
TMEM39A-203ENST00000461654 COL11A2P13942 1736 aaPredicted RBP19■□□□□ 0.63
TMEM39A-203ENST00000461654 NFKBIEO00221 500 aa19■□□□□ 0.63
TMEM39A-203ENST00000461654 C21orf2O43822 256 aa19■□□□□ 0.63
TMEM39A-203ENST00000461654 PRELPP51888 382 aa19■□□□□ 0.63
TMEM39A-203ENST00000461654 SOGA3Q5TF21 947 aa19■□□□□ 0.63
TMEM39A-203ENST00000461654 MYD88Q99836 296 aa19■□□□□ 0.63
TMEM39A-203ENST00000461654 ZBTB3Q9H5J0 574 aa19■□□□□ 0.63
TMEM39A-203ENST00000461654 C9orf78Q9NZ63 289 aaPredicted RBP19■□□□□ 0.63
TMEM39A-203ENST00000461654 PCDHB15Q9Y5E8 787 aa19■□□□□ 0.63
TMEM39A-203ENST00000461654 SBF1O95248 1867 aa19■□□□□ 0.63
TMEM39A-203ENST00000461654 LTBP3Q9NS15 1303 aa19■□□□□ 0.63
TMEM39A-203ENST00000461654 GNAI2P04899 355 aa18.99■□□□□ 0.63
TMEM39A-203ENST00000461654 UBTFL1P0CB47 393 aaPredicted RBP18.99■□□□□ 0.63
TMEM39A-203ENST00000461654 RASSF7Q02833 373 aa18.99■□□□□ 0.63
TMEM39A-203ENST00000461654 PRPF40BQ6NWY9 871 aaKnown RBP18.99■□□□□ 0.63
TMEM39A-203ENST00000461654 C7orf43Q8WVR3 580 aa18.99■□□□□ 0.63
TMEM39A-203ENST00000461654 MEIS3Q99687 375 aa18.99■□□□□ 0.63
TMEM39A-203ENST00000461654 KDM2BQ8NHM5 1336 aa18.99■□□□□ 0.63
TMEM39A-203ENST00000461654 GTF2E1P29083 439 aaPredicted RBP18.98■□□□□ 0.63
TMEM39A-203ENST00000461654 CRY2Q49AN0 593 aa18.98■□□□□ 0.63
TMEM39A-203ENST00000461654 PARP10Q53GL7 1025 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms