RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 CNKSR1Q969H4 720 aa13.57□□□□□ -0.24
TRAPPC12-213ENST00000461577 MASTLQ96GX5 879 aa13.57□□□□□ -0.24
TRAPPC12-213ENST00000461577 ATP5J2-PTCD1G3V325 749 aa13.56□□□□□ -0.24
TRAPPC12-213ENST00000461577 SRGNP10124 158 aa13.56□□□□□ -0.24
TRAPPC12-213ENST00000461577 NPR1P16066 1061 aa13.56□□□□□ -0.24
TRAPPC12-213ENST00000461577 MYD88Q99836 296 aa13.56□□□□□ -0.24
TRAPPC12-213ENST00000461577 ISCA1Q9BUE6 129 aa13.56□□□□□ -0.24
TRAPPC12-213ENST00000461577 TRMT112Q9UI30 125 aaKnown RBP13.56□□□□□ -0.24
TRAPPC12-213ENST00000461577 RNF123Q5XPI4 1314 aa13.56□□□□□ -0.24
TRAPPC12-213ENST00000461577 ABCC12Q96J65 1359 aa13.56□□□□□ -0.24
TRAPPC12-213ENST00000461577 KSR2Q6VAB6 950 aa13.55□□□□□ -0.24
TRAPPC12-213ENST00000461577 G2E3Q7L622 706 aa13.55□□□□□ -0.24
TRAPPC12-213ENST00000461577 CDCA7LQ96GN5 454 aa13.55□□□□□ -0.24
TRAPPC12-213ENST00000461577 MAP3K2Q9Y2U5 619 aa13.55□□□□□ -0.24
TRAPPC12-213ENST00000461577 TNRC6CQ9HCJ0 1690 aaKnown RBP13.54□□□□□ -0.24
TRAPPC12-213ENST00000461577 KLRG2A4D1S0 409 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC12-213ENST00000461577 PI4KAP2A4QPH2 592 aa13.54□□□□□ -0.24
TRAPPC12-213ENST00000461577 HNRNPUQ00839 825 aaKnown RBP eCLIP13.54□□□□□ -0.24
TRAPPC12-213ENST00000461577 FLIIQ13045 1269 aa13.54□□□□□ -0.24
TRAPPC12-213ENST00000461577 FKBP5Q13451 457 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC12-213ENST00000461577 PI4KAP1Q8N8J0 262 aa13.54□□□□□ -0.24
TRAPPC12-213ENST00000461577 RPGRQ92834 1020 aaKnown RBP13.54□□□□□ -0.24
TRAPPC12-213ENST00000461577 ZNF428Q96B54 188 aa13.54□□□□□ -0.24
TRAPPC12-213ENST00000461577 NLRP3Q96P20 1036 aa13.54□□□□□ -0.24
TRAPPC12-213ENST00000461577 METTL22Q9BUU2 404 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC12-213ENST00000461577 ZNF219Q9P2Y4 722 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC12-213ENST00000461577 SH3TC1Q8TE82 1336 aa13.54□□□□□ -0.24
TRAPPC12-213ENST00000461577 RIC1Q4ADV7 1423 aa13.54□□□□□ -0.24
TRAPPC12-213ENST00000461577 NEXNQ0ZGT2 675 aa13.53□□□□□ -0.24
TRAPPC12-213ENST00000461577 TRIM28Q13263 835 aaKnown RBP13.53□□□□□ -0.24
TRAPPC12-213ENST00000461577 SLC10A5Q5PT55 438 aa13.53□□□□□ -0.24
TRAPPC12-213ENST00000461577 HCLS1P14317 486 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC12-213ENST00000461577 ALDH1B1P30837 517 aa13.52□□□□□ -0.25
TRAPPC12-213ENST00000461577 PRPF40BQ6NWY9 871 aaKnown RBP13.52□□□□□ -0.25
TRAPPC12-213ENST00000461577 CCDC191Q8NCU4 936 aa13.52□□□□□ -0.25
TRAPPC12-213ENST00000461577 RBM17Q96I25 401 aaKnown RBP13.52□□□□□ -0.25
TRAPPC12-213ENST00000461577 CWC25Q9NXE8 425 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC12-213ENST00000461577 ADCY9O60503 1353 aa13.52□□□□□ -0.25
TRAPPC12-213ENST00000461577 SLX4Q8IY92 1834 aa13.52□□□□□ -0.25
TRAPPC12-213ENST00000461577 C21orf2O43822 256 aa13.51□□□□□ -0.25
TRAPPC12-213ENST00000461577 CRY2Q49AN0 593 aa13.51□□□□□ -0.25
TRAPPC12-213ENST00000461577 SOGA3Q5TF21 947 aa13.51□□□□□ -0.25
TRAPPC12-213ENST00000461577 TRMT2AQ8IZ69 625 aaKnown RBP13.51□□□□□ -0.25
TRAPPC12-213ENST00000461577 SYNE4Q8N205 404 aa13.51□□□□□ -0.25
TRAPPC12-213ENST00000461577 FAM89AQ96GI7 184 aa13.51□□□□□ -0.25
TRAPPC12-213ENST00000461577 GOLGB1Q14789 3259 aaKnown RBP13.51□□□□□ -0.25
TRAPPC12-213ENST00000461577 LAMB2P55268 1798 aa13.5□□□□□ -0.25
TRAPPC12-213ENST00000461577 HSP90B1P14625 803 aaKnown RBP13.5□□□□□ -0.25
TRAPPC12-213ENST00000461577 RTL5Q5HYW3 569 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC12-213ENST00000461577 ZBTB38Q8NAP3 1195 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC12-213ENST00000461577 DNAAF4Q8WXU2 420 aa13.5□□□□□ -0.25
TRAPPC12-213ENST00000461577 UTRNP46939 3433 aa13.5□□□□□ -0.25
TRAPPC12-213ENST00000461577 IRS4O14654 1257 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC12-213ENST00000461577 HOXA10P31260 410 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC12-213ENST00000461577 C3orf67Q6ZVT6 689 aa13.49□□□□□ -0.25
TRAPPC12-213ENST00000461577 DDX60Q8IY21 1712 aaKnown RBP13.49□□□□□ -0.25
TRAPPC12-213ENST00000461577 PCCAP05165 728 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC12-213ENST00000461577 IGKV5-2P06315 115 aa13.48□□□□□ -0.25
TRAPPC12-213ENST00000461577 CT47B1P0C2W7 299 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC12-213ENST00000461577 RASSF7Q02833 373 aa13.48□□□□□ -0.25
TRAPPC12-213ENST00000461577 CCDC93Q567U6 631 aa13.48□□□□□ -0.25
TRAPPC12-213ENST00000461577 DDX46Q7L014 1031 aaKnown RBP13.48□□□□□ -0.25
TRAPPC12-213ENST00000461577 MRPL50Q8N5N7 158 aaKnown RBP13.48□□□□□ -0.25
TRAPPC12-213ENST00000461577 CRAMP1Q96RY5 1269 aa13.48□□□□□ -0.25
TRAPPC12-213ENST00000461577 SBF1O95248 1867 aa13.48□□□□□ -0.25
TRAPPC12-213ENST00000461577 CCDC88AQ3V6T2 1871 aa13.48□□□□□ -0.25
TRAPPC12-213ENST00000461577 FER1L6Q2WGJ9 1857 aa13.47□□□□□ -0.25
TRAPPC12-213ENST00000461577 NEURL1BA8MQ27 555 aa13.47□□□□□ -0.25
TRAPPC12-213ENST00000461577 F6X3S4 739 aa13.47□□□□□ -0.25
TRAPPC12-213ENST00000461577 CWF19L2Q2TBE0 894 aaKnown RBP13.47□□□□□ -0.25
TRAPPC12-213ENST00000461577 ALDH1L2Q3SY69 923 aa13.47□□□□□ -0.25
TRAPPC12-213ENST00000461577 C9orf131Q5VYM1 1079 aa13.47□□□□□ -0.25
TRAPPC12-213ENST00000461577 JARID2Q92833 1246 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC12-213ENST00000461577 TMX4Q9H1E5 349 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC12-213ENST00000461577 RNF181Q9P0P0 153 aa13.47□□□□□ -0.25
TRAPPC12-213ENST00000461577 NFKBIEO00221 500 aa13.46□□□□□ -0.25
TRAPPC12-213ENST00000461577 PPEF1O14829 653 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC12-213ENST00000461577 ZNF784Q8NCA9 323 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC12-213ENST00000461577 LINS1Q8NG48 757 aa13.46□□□□□ -0.25
TRAPPC12-213ENST00000461577 C7orf43Q8WVR3 580 aa13.46□□□□□ -0.25
TRAPPC12-213ENST00000461577 SSH1Q8WYL5 1049 aa13.46□□□□□ -0.25
TRAPPC12-213ENST00000461577 BCL2L13Q9BXK5 485 aa13.46□□□□□ -0.25
TRAPPC12-213ENST00000461577 SMC4Q9NTJ3 1288 aa13.46□□□□□ -0.25
TRAPPC12-213ENST00000461577 ABCC4O15439 1325 aa13.45□□□□□ -0.26
TRAPPC12-213ENST00000461577 PDE8AO60658 829 aa13.45□□□□□ -0.26
TRAPPC12-213ENST00000461577 LMNB1P20700 586 aa13.45□□□□□ -0.26
TRAPPC12-213ENST00000461577 SF3B3Q15393 1217 aaKnown RBP13.45□□□□□ -0.26
TRAPPC12-213ENST00000461577 CC2D2BQ6DHV5 1058 aa13.45□□□□□ -0.26
TRAPPC12-213ENST00000461577 SLC4A10Q6U841 1118 aa13.45□□□□□ -0.26
TRAPPC12-213ENST00000461577 RTKN2Q8IZC4 609 aa13.45□□□□□ -0.26
TRAPPC12-213ENST00000461577 TAOK3Q9H2K8 898 aa13.45□□□□□ -0.26
TRAPPC12-213ENST00000461577 PTPRCP08575 1304 aa13.44□□□□□ -0.26
TRAPPC12-213ENST00000461577 ZBED9Q6R2W3 1325 aa13.44□□□□□ -0.26
TRAPPC12-213ENST00000461577 CDHR2Q9BYE9 1310 aa13.44□□□□□ -0.26
TRAPPC12-213ENST00000461577 BBOX1O75936 387 aa13.44□□□□□ -0.26
TRAPPC12-213ENST00000461577 GRAPQ13588 217 aa13.44□□□□□ -0.26
TRAPPC12-213ENST00000461577 GCKRQ14397 625 aa13.44□□□□□ -0.26
TRAPPC12-213ENST00000461577 CCDC152Q4G0S7 254 aa13.44□□□□□ -0.26
TRAPPC12-213ENST00000461577 GRAPLQ8TC17 118 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC12-213ENST00000461577 TAF1P21675 1872 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms